RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 HACD2Q6Y1H2 254 aa11.75□□□□□ -0.53
SHMT2-230ENST00000557427 GK5Q6ZS86 529 aa11.75□□□□□ -0.53
SHMT2-230ENST00000557427 SHISA6Q6ZSJ9 500 aa11.75□□□□□ -0.53
SHMT2-230ENST00000557427 GOLGA7Q7Z5G4 137 aa11.75□□□□□ -0.53
SHMT2-230ENST00000557427 DDIASQ8IXT1 998 aa11.75□□□□□ -0.53
SHMT2-230ENST00000557427 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.75□□□□□ -0.53
SHMT2-230ENST00000557427 LRRC56Q8IYG6 542 aaPredicted RBP11.75□□□□□ -0.53
SHMT2-230ENST00000557427 OR11G2Q8NGC1 345 aa11.75□□□□□ -0.53
SHMT2-230ENST00000557427 SPATA3Q8NHX4 192 aa11.75□□□□□ -0.53
SHMT2-230ENST00000557427 HIST1H2AHQ96KK5 128 aa11.75□□□□□ -0.53
SHMT2-230ENST00000557427 CCDC138Q96M89 665 aa11.75□□□□□ -0.53
SHMT2-230ENST00000557427 ZNF285Q96NJ3 590 aa11.75□□□□□ -0.53
SHMT2-230ENST00000557427 KCNA7Q96RP8 456 aa11.75□□□□□ -0.53
SHMT2-230ENST00000557427 SPSB2Q99619 263 aa11.75□□□□□ -0.53
SHMT2-230ENST00000557427 HIST1H2AJQ99878 128 aa11.75□□□□□ -0.53
SHMT2-230ENST00000557427 ZFYVE21Q9BQ24 234 aa11.75□□□□□ -0.53
SHMT2-230ENST00000557427 H2AFJQ9BTM1 129 aa11.75□□□□□ -0.53
SHMT2-230ENST00000557427 YIPF2Q9BWQ6 316 aa11.75□□□□□ -0.53
SHMT2-230ENST00000557427 MRPL1Q9BYD6 325 aaKnown RBP11.75□□□□□ -0.53
SHMT2-230ENST00000557427 RIC8BQ9NVN3 520 aa11.75□□□□□ -0.53
SHMT2-230ENST00000557427 TMEM45AQ9NWC5 275 aa11.75□□□□□ -0.53
SHMT2-230ENST00000557427 ZNF225Q9UK10 706 aa11.75□□□□□ -0.53
SHMT2-230ENST00000557427 C15orf41Q9Y2V0 281 aa11.75□□□□□ -0.53
SHMT2-230ENST00000557427 KLK4Q9Y5K2 254 aa11.75□□□□□ -0.53
SHMT2-230ENST00000557427 AKAP6Q13023 2319 aa11.75□□□□□ -0.53
SHMT2-230ENST00000557427 COL6A5A8TX70 2615 aa11.74□□□□□ -0.53
SHMT2-230ENST00000557427 ATP6AP2A0A1C7CYW4 349 aa11.74□□□□□ -0.53
SHMT2-230ENST00000557427 FITM1A5D6W6 292 aa11.74□□□□□ -0.53
SHMT2-230ENST00000557427 BBIP1A8MTZ0 92 aa11.74□□□□□ -0.53
SHMT2-230ENST00000557427 H0Y3Z8 333 aa11.74□□□□□ -0.53
SHMT2-230ENST00000557427 TAPBPO15533 448 aa11.74□□□□□ -0.53
SHMT2-230ENST00000557427 ATP6AP2O75787 350 aa11.74□□□□□ -0.53
SHMT2-230ENST00000557427 OR4F21O95013 312 aa11.74□□□□□ -0.53
SHMT2-230ENST00000557427 CCNDBP1O95273 360 aa11.74□□□□□ -0.53
SHMT2-230ENST00000557427 MED26O95402 600 aa11.74□□□□□ -0.53
SHMT2-230ENST00000557427 OTCP00480 354 aa11.74□□□□□ -0.53
SHMT2-230ENST00000557427 STATHP02808 62 aa11.74□□□□□ -0.53
SHMT2-230ENST00000557427 ALDOCP09972 364 aaKnown RBP11.74□□□□□ -0.53
SHMT2-230ENST00000557427 SOX11P35716 441 aa11.74□□□□□ -0.53
SHMT2-230ENST00000557427 GCGRP47871 477 aa11.74□□□□□ -0.53
SHMT2-230ENST00000557427 PIK3CGP48736 1102 aa11.74□□□□□ -0.53
SHMT2-230ENST00000557427 AP2B1P63010 937 aa11.74□□□□□ -0.53
SHMT2-230ENST00000557427 ABATP80404 500 aa11.74□□□□□ -0.53
SHMT2-230ENST00000557427 PMP22Q01453 160 aa11.74□□□□□ -0.53
SHMT2-230ENST00000557427 RBPJQ06330 500 aa11.74□□□□□ -0.53
SHMT2-230ENST00000557427 SLC34A1Q06495 639 aa11.74□□□□□ -0.53
SHMT2-230ENST00000557427 SP140Q13342 867 aa11.74□□□□□ -0.53
SHMT2-230ENST00000557427 YOD1Q5VVQ6 348 aaPredicted RBP11.74□□□□□ -0.53
SHMT2-230ENST00000557427 AGTRAPQ6RW13 159 aa11.74□□□□□ -0.53
SHMT2-230ENST00000557427 Q6ZPB1 254 aaPredicted RBP11.74□□□□□ -0.53
SHMT2-230ENST00000557427 RNF44Q7L0R7 432 aa11.74□□□□□ -0.53
SHMT2-230ENST00000557427 OVCH1Q7RTY7 1134 aa11.74□□□□□ -0.53
SHMT2-230ENST00000557427 PAQR7Q86WK9 346 aa11.74□□□□□ -0.53
SHMT2-230ENST00000557427 TCAIMQ8N3R3 496 aa11.74□□□□□ -0.53
SHMT2-230ENST00000557427 DNAJB8Q8NHS0 232 aa11.74□□□□□ -0.53
SHMT2-230ENST00000557427 TSPEARQ8WU66 669 aa11.74□□□□□ -0.53
SHMT2-230ENST00000557427 HAS2Q92819 552 aa11.74□□□□□ -0.53
SHMT2-230ENST00000557427 RHBDF1Q96CC6 855 aa11.74□□□□□ -0.53
SHMT2-230ENST00000557427 TUBGCP3Q96CW5 907 aa11.74□□□□□ -0.53
SHMT2-230ENST00000557427 CD244Q9BZW8 370 aa11.74□□□□□ -0.53
SHMT2-230ENST00000557427 LIME1Q9H400 295 aa11.74□□□□□ -0.53
SHMT2-230ENST00000557427 SYNPO2LQ9H987 977 aa11.74□□□□□ -0.53
SHMT2-230ENST00000557427 WDR41Q9HAD4 459 aa11.74□□□□□ -0.53
SHMT2-230ENST00000557427 POMPQ9Y244 141 aa11.74□□□□□ -0.53
SHMT2-230ENST00000557427 ASB1Q9Y576 335 aa11.74□□□□□ -0.53
SHMT2-230ENST00000557427 PABPN1LA6NDY0 278 aaKnown RBP11.73□□□□□ -0.53
SHMT2-230ENST00000557427 K7EPI3 171 aa11.73□□□□□ -0.53
SHMT2-230ENST00000557427 OR7A17O14581 309 aa11.73□□□□□ -0.53
SHMT2-230ENST00000557427 HAT1O14929 419 aa11.73□□□□□ -0.53
SHMT2-230ENST00000557427 ZNHIT1O43257 154 aa11.73□□□□□ -0.53
SHMT2-230ENST00000557427 PDE5AO76074 875 aa11.73□□□□□ -0.53
SHMT2-230ENST00000557427 RASAL1O95294 804 aa11.73□□□□□ -0.53
SHMT2-230ENST00000557427 GUCA1CO95843 209 aa11.73□□□□□ -0.53
SHMT2-230ENST00000557427 CRYABP02511 175 aaKnown RBP11.73□□□□□ -0.53
SHMT2-230ENST00000557427 ANXA5P08758 320 aa11.73□□□□□ -0.53
SHMT2-230ENST00000557427 LINC00032P0C843 101 aa11.73□□□□□ -0.53
SHMT2-230ENST00000557427 IDO1P14902 403 aa11.73□□□□□ -0.53
SHMT2-230ENST00000557427 GGT5P36269 586 aa11.73□□□□□ -0.53
SHMT2-230ENST00000557427 CASP6P55212 293 aa11.73□□□□□ -0.53
SHMT2-230ENST00000557427 TRAF3Q13114 568 aa11.73□□□□□ -0.53
SHMT2-230ENST00000557427 NKG7Q16617 165 aa11.73□□□□□ -0.53
SHMT2-230ENST00000557427 PHKG1Q16816 387 aa11.73□□□□□ -0.53
SHMT2-230ENST00000557427 HKDC1Q2TB90 917 aa11.73□□□□□ -0.53
SHMT2-230ENST00000557427 FBXO48Q5FWF7 155 aa11.73□□□□□ -0.53
SHMT2-230ENST00000557427 PIGGQ5H8A4 983 aa11.73□□□□□ -0.53
SHMT2-230ENST00000557427 REP15Q6BDI9 236 aa11.73□□□□□ -0.53
SHMT2-230ENST00000557427 PRSS58Q8IYP2 241 aa11.73□□□□□ -0.53
SHMT2-230ENST00000557427 MIER2Q8N344 545 aa11.73□□□□□ -0.53
SHMT2-230ENST00000557427 CSNK1A1LQ8N752 337 aa11.73□□□□□ -0.53
SHMT2-230ENST00000557427 AMER2Q8N7J2 671 aa11.73□□□□□ -0.53
SHMT2-230ENST00000557427 RERGQ96A58 199 aaPredicted RBP11.73□□□□□ -0.53
SHMT2-230ENST00000557427 ESAMQ96AP7 390 aa11.73□□□□□ -0.53
SHMT2-230ENST00000557427 OR2A5Q96R48 311 aa11.73□□□□□ -0.53
SHMT2-230ENST00000557427 EGFL8Q99944 293 aa11.73□□□□□ -0.53
SHMT2-230ENST00000557427 MACROD1Q9BQ69 325 aa11.73□□□□□ -0.53
SHMT2-230ENST00000557427 TMEM79Q9BSE2 394 aa11.73□□□□□ -0.53
SHMT2-230ENST00000557427 TRIM54Q9BYV2 358 aa11.73□□□□□ -0.53
SHMT2-230ENST00000557427 SOX17Q9H6I2 414 aaPredicted RBP11.73□□□□□ -0.53
SHMT2-230ENST00000557427 NOL11Q9H8H0 719 aaKnown RBP11.73□□□□□ -0.53
SHMT2-230ENST00000557427 ZNF304Q9HCX3 659 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms