RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 DOK4Q8TEW6 326 aa11.32□□□□□ -0.6
PSEN1-220ENST00000557037 SMAP2Q8WU79 429 aaPredicted RBP11.32□□□□□ -0.6
PSEN1-220ENST00000557037 KRT35Q92764 455 aa11.32□□□□□ -0.6
PSEN1-220ENST00000557037 UCN2Q96RP3 112 aa11.32□□□□□ -0.6
PSEN1-220ENST00000557037 ANP32EQ9BTT0 268 aa11.32□□□□□ -0.6
PSEN1-220ENST00000557037 BARX1Q9HBU1 254 aaPredicted RBP11.32□□□□□ -0.6
PSEN1-220ENST00000557037 EML4Q9HC35 981 aaKnown RBP11.32□□□□□ -0.6
PSEN1-220ENST00000557037 ANO10Q9NW15 660 aa11.32□□□□□ -0.6
PSEN1-220ENST00000557037 MRPS33Q9Y291 106 aaKnown RBP11.32□□□□□ -0.6
PSEN1-220ENST00000557037 A0A1B0GTH6 734 aa11.31□□□□□ -0.6
PSEN1-220ENST00000557037 GRID2IPA4D2P6 1211 aa11.31□□□□□ -0.6
PSEN1-220ENST00000557037 URADA6NGE7 173 aa11.31□□□□□ -0.6
PSEN1-220ENST00000557037 GNB5O14775 395 aa11.31□□□□□ -0.6
PSEN1-220ENST00000557037 CLOCKO15516 846 aa11.31□□□□□ -0.6
PSEN1-220ENST00000557037 OR10H2O60403 315 aa11.31□□□□□ -0.6
PSEN1-220ENST00000557037 CTNSO60931 367 aa11.31□□□□□ -0.6
PSEN1-220ENST00000557037 ESR1P03372 595 aa11.31□□□□□ -0.6
PSEN1-220ENST00000557037 F7P08709 466 aaPredicted RBP11.31□□□□□ -0.6
PSEN1-220ENST00000557037 MPC1LP0DKB6 136 aa11.31□□□□□ -0.6
PSEN1-220ENST00000557037 HNF1AP20823 631 aa11.31□□□□□ -0.6
PSEN1-220ENST00000557037 CLCN7P51798 805 aa11.31□□□□□ -0.6
PSEN1-220ENST00000557037 GDF10P55107 478 aa11.31□□□□□ -0.6
PSEN1-220ENST00000557037 BBS9Q3SYG4 887 aa11.31□□□□□ -0.6
PSEN1-220ENST00000557037 MIDNQ504T8 468 aa11.31□□□□□ -0.6
PSEN1-220ENST00000557037 SBSNQ6UWP8 590 aa11.31□□□□□ -0.6
PSEN1-220ENST00000557037 CYHR1Q6ZMK1 362 aa11.31□□□□□ -0.6
PSEN1-220ENST00000557037 MILR1Q7Z6M3 343 aa11.31□□□□□ -0.6
PSEN1-220ENST00000557037 STRA8Q7Z7C7 330 aa11.31□□□□□ -0.6
PSEN1-220ENST00000557037 PACS2Q86VP3 889 aa11.31□□□□□ -0.6
PSEN1-220ENST00000557037 SLC15A4Q8N697 577 aa11.31□□□□□ -0.6
PSEN1-220ENST00000557037 ANKRD53Q8N9V6 530 aa11.31□□□□□ -0.6
PSEN1-220ENST00000557037 OR10H5Q8NGA6 315 aa11.31□□□□□ -0.6
PSEN1-220ENST00000557037 OR8K1Q8NGG5 319 aa11.31□□□□□ -0.6
PSEN1-220ENST00000557037 NUBPLQ8TB37 319 aa11.31□□□□□ -0.6
PSEN1-220ENST00000557037 CAVIN3Q969G5 261 aa11.31□□□□□ -0.6
PSEN1-220ENST00000557037 FBXW5Q969U6 566 aa11.31□□□□□ -0.6
PSEN1-220ENST00000557037 REPS1Q96D71 796 aa11.31□□□□□ -0.6
PSEN1-220ENST00000557037 FAR2Q96K12 515 aa11.31□□□□□ -0.6
PSEN1-220ENST00000557037 GAL3ST4Q96RP7 486 aa11.31□□□□□ -0.6
PSEN1-220ENST00000557037 NTMT1Q9BV86 223 aa11.31□□□□□ -0.6
PSEN1-220ENST00000557037 MANSC1Q9H8J5 431 aa11.31□□□□□ -0.6
PSEN1-220ENST00000557037 HEY2Q9UBP5 337 aa11.31□□□□□ -0.6
PSEN1-220ENST00000557037 IKBKGQ9Y6K9 419 aa11.31□□□□□ -0.6
PSEN1-220ENST00000557037 LOC100289279A0A1B0GTE1 492 aa11.3□□□□□ -0.6
PSEN1-220ENST00000557037 A0A1W2PP18 115 aa11.3□□□□□ -0.6
PSEN1-220ENST00000557037 HRKO00198 91 aa11.3□□□□□ -0.6
PSEN1-220ENST00000557037 PLOD2O00469 737 aa11.3□□□□□ -0.6
PSEN1-220ENST00000557037 PJA2O43164 708 aa11.3□□□□□ -0.6
PSEN1-220ENST00000557037 GCKP35557 465 aa11.3□□□□□ -0.6
PSEN1-220ENST00000557037 AHRP35869 848 aa11.3□□□□□ -0.6
PSEN1-220ENST00000557037 KIR2DL2P43627 348 aaPredicted RBP11.3□□□□□ -0.6
PSEN1-220ENST00000557037 SLC6A12P48065 614 aa11.3□□□□□ -0.6
PSEN1-220ENST00000557037 NUDT6P53370 316 aa11.3□□□□□ -0.6
PSEN1-220ENST00000557037 FBXW4P57775 412 aa11.3□□□□□ -0.6
PSEN1-220ENST00000557037 CRADDP78560 199 aa11.3□□□□□ -0.6
PSEN1-220ENST00000557037 STX1AQ16623 288 aa11.3□□□□□ -0.6
PSEN1-220ENST00000557037 TTLL9Q3SXZ7 439 aa11.3□□□□□ -0.6
PSEN1-220ENST00000557037 KBTBD12Q3ZCT8 623 aa11.3□□□□□ -0.6
PSEN1-220ENST00000557037 TBCELQ5QJ74 424 aa11.3□□□□□ -0.6
PSEN1-220ENST00000557037 FAM166AQ6J272 317 aa11.3□□□□□ -0.6
PSEN1-220ENST00000557037 TRIM42Q8IWZ5 723 aa11.3□□□□□ -0.6
PSEN1-220ENST00000557037 RDH11Q8TC12 318 aa11.3□□□□□ -0.6
PSEN1-220ENST00000557037 SNF8Q96H20 258 aa11.3□□□□□ -0.6
PSEN1-220ENST00000557037 SENP5Q96HI0 755 aaPredicted RBP11.3□□□□□ -0.6
PSEN1-220ENST00000557037 ZNF845Q96IR2 970 aaPredicted RBP11.3□□□□□ -0.6
PSEN1-220ENST00000557037 HAUS8Q9BT25 410 aa11.3□□□□□ -0.6
PSEN1-220ENST00000557037 TEX10Q9NXF1 929 aaPredicted RBP11.3□□□□□ -0.6
PSEN1-220ENST00000557037 ADAMTS6Q9UKP5 1117 aa11.3□□□□□ -0.6
PSEN1-220ENST00000557037 ANKRD33BA6NCL7 494 aa11.29□□□□□ -0.6
PSEN1-220ENST00000557037 CYR61O00622 381 aa11.29□□□□□ -0.6
PSEN1-220ENST00000557037 TP53I11O14683 189 aa11.29□□□□□ -0.6
PSEN1-220ENST00000557037 B3GALT2O43825 422 aa11.29□□□□□ -0.6
PSEN1-220ENST00000557037 LDB3O75112 727 aa11.29□□□□□ -0.6
PSEN1-220ENST00000557037 CRHP06850 196 aa11.29□□□□□ -0.6
PSEN1-220ENST00000557037 PAMP19021 973 aa11.29□□□□□ -0.6
PSEN1-220ENST00000557037 PTNP21246 168 aa11.29□□□□□ -0.6
PSEN1-220ENST00000557037 CHMP24386 653 aa11.29□□□□□ -0.6
PSEN1-220ENST00000557037 NMBRP28336 390 aa11.29□□□□□ -0.6
PSEN1-220ENST00000557037 PTPN6P29350 595 aa11.29□□□□□ -0.6
PSEN1-220ENST00000557037 ACTG1P63261 375 aa11.29□□□□□ -0.6
PSEN1-220ENST00000557037 NR1I3Q14994 352 aa11.29□□□□□ -0.6
PSEN1-220ENST00000557037 RBBP5Q15291 538 aaKnown RBP11.29□□□□□ -0.6
PSEN1-220ENST00000557037 NTRK2Q16620 822 aa11.29□□□□□ -0.6
PSEN1-220ENST00000557037 ABHD17CQ6PCB6 329 aa11.29□□□□□ -0.6
PSEN1-220ENST00000557037 SASS6Q6UVJ0 657 aa11.29□□□□□ -0.6
PSEN1-220ENST00000557037 CLEC2AQ6UVW9 174 aa11.29□□□□□ -0.6
PSEN1-220ENST00000557037 ENPP6Q6UWR7 440 aa11.29□□□□□ -0.6
PSEN1-220ENST00000557037 CES3Q6UWW8 571 aa11.29□□□□□ -0.6
PSEN1-220ENST00000557037 SDCCAG8Q86SQ7 713 aaPredicted RBP11.29□□□□□ -0.6
PSEN1-220ENST00000557037 DND1Q8IYX4 353 aaKnown RBP11.29□□□□□ -0.6
PSEN1-220ENST00000557037 PLD6Q8N2A8 252 aaKnown RBP11.29□□□□□ -0.6
PSEN1-220ENST00000557037 TRPV3Q8NET8 790 aa11.29□□□□□ -0.6
PSEN1-220ENST00000557037 TSNARE1Q96NA8 513 aa11.29□□□□□ -0.6
PSEN1-220ENST00000557037 OR4K3Q96R72 315 aa11.29□□□□□ -0.6
PSEN1-220ENST00000557037 NPLQ9BXD5 320 aaPredicted RBP11.29□□□□□ -0.6
PSEN1-220ENST00000557037 OSBPL8Q9BZF1 889 aa11.29□□□□□ -0.6
PSEN1-220ENST00000557037 TREX1Q9NSU2 369 aa11.29□□□□□ -0.6
PSEN1-220ENST00000557037 CAPN11Q9UMQ6 739 aa11.29□□□□□ -0.6
PSEN1-220ENST00000557037 PDE10AQ9Y233 779 aa11.29□□□□□ -0.6
PSEN1-220ENST00000557037 EIF3FO00303 357 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms