RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 RGS1Q08116 209 aa9.23□□□□□ -0.93
HNRNPC-228ENST00000557033 CDC16Q13042 620 aa9.23□□□□□ -0.93
HNRNPC-228ENST00000557033 PCOLCEQ15113 449 aa9.23□□□□□ -0.93
HNRNPC-228ENST00000557033 EIF2S3LQ2VIR3 472 aaKnown RBP9.23□□□□□ -0.93
HNRNPC-228ENST00000557033 CDKL4Q5MAI5 379 aa9.23□□□□□ -0.93
HNRNPC-228ENST00000557033 TEPPQ6URK8 271 aa9.23□□□□□ -0.93
HNRNPC-228ENST00000557033 C3orf62Q6ZUJ4 267 aa9.23□□□□□ -0.93
HNRNPC-228ENST00000557033 PRSS41Q7RTY9 318 aa9.23□□□□□ -0.93
HNRNPC-228ENST00000557033 CPEB2Q7Z5Q1 589 aaKnown RBP9.23□□□□□ -0.93
HNRNPC-228ENST00000557033 ADAMTSL2Q86TH1 951 aa9.23□□□□□ -0.93
HNRNPC-228ENST00000557033 THOC6Q86W42 341 aaKnown RBP9.23□□□□□ -0.93
HNRNPC-228ENST00000557033 PDSS2Q86YH6 399 aa9.23□□□□□ -0.93
HNRNPC-228ENST00000557033 KLHDC8AQ8IYD2 350 aa9.23□□□□□ -0.93
HNRNPC-228ENST00000557033 TCAIMQ8N3R3 496 aa9.23□□□□□ -0.93
HNRNPC-228ENST00000557033 PLPP5Q8NEB5 264 aa9.23□□□□□ -0.93
HNRNPC-228ENST00000557033 TRPV3Q8NET8 790 aa9.23□□□□□ -0.93
HNRNPC-228ENST00000557033 BRIX1Q8TDN6 353 aaKnown RBP9.23□□□□□ -0.93
HNRNPC-228ENST00000557033 ANKRD49Q8WVL7 239 aa9.23□□□□□ -0.93
HNRNPC-228ENST00000557033 NEIL2Q969S2 332 aa9.23□□□□□ -0.93
HNRNPC-228ENST00000557033 TSPAN17Q96FV3 270 aa9.23□□□□□ -0.93
HNRNPC-228ENST00000557033 SNX22Q96L94 193 aa9.23□□□□□ -0.93
HNRNPC-228ENST00000557033 ALPK1Q96QP1 1244 aa9.23□□□□□ -0.93
HNRNPC-228ENST00000557033 OR1F2PQ96R84 312 aa9.23□□□□□ -0.93
HNRNPC-228ENST00000557033 SERINC2Q96SA4 455 aa9.23□□□□□ -0.93
HNRNPC-228ENST00000557033 CPNE1Q99829 537 aa9.23□□□□□ -0.93
HNRNPC-228ENST00000557033 AIF1LQ9BQI0 150 aa9.23□□□□□ -0.93
HNRNPC-228ENST00000557033 CAPS2Q9BXY5 557 aa9.23□□□□□ -0.93
HNRNPC-228ENST00000557033 VN1R1Q9GZP7 353 aa9.23□□□□□ -0.93
HNRNPC-228ENST00000557033 RAB17Q9H0T7 212 aa9.23□□□□□ -0.93
HNRNPC-228ENST00000557033 MRPL46Q9H2W6 279 aaKnown RBP9.23□□□□□ -0.93
HNRNPC-228ENST00000557033 PELI2Q9HAT8 420 aa9.23□□□□□ -0.93
HNRNPC-228ENST00000557033 SAYSD1Q9NPB0 183 aa9.23□□□□□ -0.93
HNRNPC-228ENST00000557033 PTGFRNQ9P2B2 879 aa9.23□□□□□ -0.93
HNRNPC-228ENST00000557033 CTNNAL1Q9UBT7 734 aa9.23□□□□□ -0.93
HNRNPC-228ENST00000557033 TEKT2Q9UIF3 430 aa9.23□□□□□ -0.93
HNRNPC-228ENST00000557033 IKZF3Q9UKT9 509 aa9.23□□□□□ -0.93
HNRNPC-228ENST00000557033 SLC22A14Q9Y267 594 aa9.23□□□□□ -0.93
HNRNPC-228ENST00000557033 UTP11Q9Y3A2 253 aaKnown RBP9.23□□□□□ -0.93
HNRNPC-228ENST00000557033 NAALAD2Q9Y3Q0 740 aa9.23□□□□□ -0.93
HNRNPC-228ENST00000557033 CSAG2Q9Y5P2 127 aa9.23□□□□□ -0.93
HNRNPC-228ENST00000557033 RELNP78509 3460 aa9.22□□□□□ -0.93
HNRNPC-228ENST00000557033 FLNCQ14315 2725 aa9.22□□□□□ -0.93
HNRNPC-228ENST00000557033 TRAV17A0A0B4J275 112 aa9.22□□□□□ -0.93
HNRNPC-228ENST00000557033 ANKUB1A6NFN9 424 aa9.22□□□□□ -0.93
HNRNPC-228ENST00000557033 NDUFS4O43181 175 aa9.22□□□□□ -0.93
HNRNPC-228ENST00000557033 RAD51CO43502 376 aa9.22□□□□□ -0.93
HNRNPC-228ENST00000557033 GALR3O60755 368 aaPredicted RBP9.22□□□□□ -0.93
HNRNPC-228ENST00000557033 JRKO75564 520 aa9.22□□□□□ -0.93
HNRNPC-228ENST00000557033 STATHP02808 62 aa9.22□□□□□ -0.93
HNRNPC-228ENST00000557033 MT-ND5P03915 603 aa9.22□□□□□ -0.93
HNRNPC-228ENST00000557033 ALOX12P18054 663 aa9.22□□□□□ -0.93
HNRNPC-228ENST00000557033 GNAZP19086 355 aa9.22□□□□□ -0.93
HNRNPC-228ENST00000557033 GSTM2P28161 218 aa9.22□□□□□ -0.93
HNRNPC-228ENST00000557033 GP5P40197 560 aa9.22□□□□□ -0.93
HNRNPC-228ENST00000557033 TNFSF10P50591 281 aa9.22□□□□□ -0.93
HNRNPC-228ENST00000557033 EFNA3P52797 238 aa9.22□□□□□ -0.93
HNRNPC-228ENST00000557033 ATP6V0D1P61421 351 aa9.22□□□□□ -0.93
HNRNPC-228ENST00000557033 ARG2P78540 354 aa9.22□□□□□ -0.93
HNRNPC-228ENST00000557033 MRPS25P82663 173 aaKnown RBP9.22□□□□□ -0.93
HNRNPC-228ENST00000557033 MRPL49Q13405 166 aaKnown RBP9.22□□□□□ -0.93
HNRNPC-228ENST00000557033 IKZF1Q13422 519 aa9.22□□□□□ -0.93
HNRNPC-228ENST00000557033 MFSD4BQ5TF39 518 aa9.22□□□□□ -0.93
HNRNPC-228ENST00000557033 KANK2Q63ZY3 851 aa9.22□□□□□ -0.93
HNRNPC-228ENST00000557033 PLAG1Q6DJT9 500 aa9.22□□□□□ -0.93
HNRNPC-228ENST00000557033 FRA10AC1Q70Z53 315 aa9.22□□□□□ -0.93
HNRNPC-228ENST00000557033 ABHD13Q7L211 337 aa9.22□□□□□ -0.93
HNRNPC-228ENST00000557033 CEP97Q8IW35 865 aa9.22□□□□□ -0.93
HNRNPC-228ENST00000557033 ST6GALNAC3Q8NDV1 305 aa9.22□□□□□ -0.93
HNRNPC-228ENST00000557033 ZNF740Q8NDX6 193 aa9.22□□□□□ -0.93
HNRNPC-228ENST00000557033 CATSPER1Q8NEC5 780 aa9.22□□□□□ -0.93
HNRNPC-228ENST00000557033 ZCCHC10Q8TBK6 192 aa9.22□□□□□ -0.93
HNRNPC-228ENST00000557033 M1APQ8TC57 530 aa9.22□□□□□ -0.93
HNRNPC-228ENST00000557033 SSC4DQ8WTU2 575 aa9.22□□□□□ -0.93
HNRNPC-228ENST00000557033 FAR1Q8WVX9 515 aa9.22□□□□□ -0.93
HNRNPC-228ENST00000557033 MOCOSQ96EN8 888 aa9.22□□□□□ -0.93
HNRNPC-228ENST00000557033 EGFL8Q99944 293 aa9.22□□□□□ -0.93
HNRNPC-228ENST00000557033 CNPPD1Q9BV87 410 aa9.22□□□□□ -0.93
HNRNPC-228ENST00000557033 DERL2Q9GZP9 239 aa9.22□□□□□ -0.93
HNRNPC-228ENST00000557033 RNF32Q9H0A6 362 aa9.22□□□□□ -0.93
HNRNPC-228ENST00000557033 DPH5Q9H2P9 285 aa9.22□□□□□ -0.93
HNRNPC-228ENST00000557033 SMYD2Q9NRG4 433 aa9.22□□□□□ -0.93
HNRNPC-228ENST00000557033 STMN3Q9NZ72 180 aa9.22□□□□□ -0.93
HNRNPC-228ENST00000557033 GRHL1Q9NZI5 618 aa9.22□□□□□ -0.93
HNRNPC-228ENST00000557033 HCN3Q9P1Z3 774 aa9.22□□□□□ -0.93
HNRNPC-228ENST00000557033 SLC13A4Q9UKG4 626 aa9.22□□□□□ -0.93
HNRNPC-228ENST00000557033 NTNG1Q9Y2I2 539 aa9.22□□□□□ -0.93
HNRNPC-228ENST00000557033 MTO1Q9Y2Z2 717 aaKnown RBP9.22□□□□□ -0.93
HNRNPC-228ENST00000557033 COL12A1Q99715 3063 aa9.21□□□□□ -0.93
HNRNPC-228ENST00000557033 TCRBV9S1A1TA0A576 114 aa9.21□□□□□ -0.94
HNRNPC-228ENST00000557033 NPEPPSL1A6NEC2 478 aa9.21□□□□□ -0.94
HNRNPC-228ENST00000557033 WIPF3A6NGB9 483 aa9.21□□□□□ -0.94
HNRNPC-228ENST00000557033 FAM159BA6NKW6 160 aa9.21□□□□□ -0.94
HNRNPC-228ENST00000557033 MAGEB17A8MXT2 336 aa9.21□□□□□ -0.94
HNRNPC-228ENST00000557033 CXorf49A8MYA2 514 aaPredicted RBP9.21□□□□□ -0.94
HNRNPC-228ENST00000557033 SEMA7AO75326 666 aa9.21□□□□□ -0.94
HNRNPC-228ENST00000557033 RDH16O75452 317 aa9.21□□□□□ -0.94
HNRNPC-228ENST00000557033 WISP3O95389 354 aaPredicted RBP9.21□□□□□ -0.94
HNRNPC-228ENST00000557033 LY86O95711 162 aa9.21□□□□□ -0.94
HNRNPC-228ENST00000557033 AMY1AP04745 511 aa9.21□□□□□ -0.94
HNRNPC-228ENST00000557033 SERPINA6P08185 405 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms