RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 TSNQ15631 228 aaKnown RBP8.28□□□□□ -1.08
HNRNPC-227ENST00000556897 MSS51Q4VC12 460 aa8.28□□□□□ -1.08
HNRNPC-227ENST00000556897 TEDDM1Q5T9Z0 273 aa8.28□□□□□ -1.08
HNRNPC-227ENST00000556897 LCE2DQ5TA82 110 aaPredicted RBP8.28□□□□□ -1.08
HNRNPC-227ENST00000556897 PRAMEF9Q5VWM5 478 aa8.28□□□□□ -1.08
HNRNPC-227ENST00000556897 NSUN5P2Q63ZY6 315 aa8.28□□□□□ -1.08
HNRNPC-227ENST00000556897 FAM45BPQ6NSW5 357 aa8.28□□□□□ -1.08
HNRNPC-227ENST00000556897 CCDC137Q6PK04 289 aaKnown RBP8.28□□□□□ -1.08
HNRNPC-227ENST00000556897 ZNF793Q6ZN11 406 aa8.28□□□□□ -1.08
HNRNPC-227ENST00000556897 DGAT2L6Q6ZPD8 337 aa8.28□□□□□ -1.08
HNRNPC-227ENST00000556897 UBE3DQ7Z6J8 389 aa8.28□□□□□ -1.08
HNRNPC-227ENST00000556897 GALNT7Q86SF2 657 aa8.28□□□□□ -1.08
HNRNPC-227ENST00000556897 IGDCC3Q8IVU1 814 aa8.28□□□□□ -1.08
HNRNPC-227ENST00000556897 PPIL6Q8IXY8 311 aa8.28□□□□□ -1.08
HNRNPC-227ENST00000556897 RASGEF1CQ8N431 466 aa8.28□□□□□ -1.08
HNRNPC-227ENST00000556897 ACOT4Q8N9L9 421 aa8.28□□□□□ -1.08
HNRNPC-227ENST00000556897 SPC24Q8NBT2 197 aa8.28□□□□□ -1.08
HNRNPC-227ENST00000556897 FAM45AQ8TCE6 357 aa8.28□□□□□ -1.08
HNRNPC-227ENST00000556897 DOK4Q8TEW6 326 aa8.28□□□□□ -1.08
HNRNPC-227ENST00000556897 PPWD1Q96BP3 646 aaKnown RBP8.28□□□□□ -1.08
HNRNPC-227ENST00000556897 RHBDF1Q96CC6 855 aa8.28□□□□□ -1.08
HNRNPC-227ENST00000556897 COX4I2Q96KJ9 171 aa8.28□□□□□ -1.08
HNRNPC-227ENST00000556897 DGAT2Q96PD7 388 aa8.28□□□□□ -1.08
HNRNPC-227ENST00000556897 KCNC2Q96PR1 638 aa8.28□□□□□ -1.08
HNRNPC-227ENST00000556897 GAL3ST4Q96RP7 486 aa8.28□□□□□ -1.08
HNRNPC-227ENST00000556897 TRIB1Q96RU8 372 aa8.28□□□□□ -1.08
HNRNPC-227ENST00000556897 WDR83Q9BRX9 315 aaKnown RBP8.28□□□□□ -1.08
HNRNPC-227ENST00000556897 RBSNQ9H1K0 784 aa8.28□□□□□ -1.08
HNRNPC-227ENST00000556897 NT5DC2Q9H857 520 aa8.28□□□□□ -1.08
HNRNPC-227ENST00000556897 PLAC1Q9HBJ0 212 aa8.28□□□□□ -1.08
HNRNPC-227ENST00000556897 CNIH4Q9P003 139 aa8.28□□□□□ -1.08
HNRNPC-227ENST00000556897 CNOT11Q9UKZ1 510 aaKnown RBP8.28□□□□□ -1.08
HNRNPC-227ENST00000556897 ZNF490Q9ULM2 529 aaPredicted RBP8.28□□□□□ -1.08
HNRNPC-227ENST00000556897 SLC6A5Q9Y345 797 aa8.28□□□□□ -1.08
HNRNPC-227ENST00000556897 OARD1Q9Y530 152 aa8.28□□□□□ -1.08
HNRNPC-227ENST00000556897 DOCK7Q96N67 2140 aa8.27□□□□□ -1.08
HNRNPC-227ENST00000556897 CD8B2A6NJW9 211 aa8.27□□□□□ -1.09
HNRNPC-227ENST00000556897 RTCAO00442 366 aaKnown RBP8.27□□□□□ -1.09
HNRNPC-227ENST00000556897 ARHGEF9O43307 516 aa8.27□□□□□ -1.09
HNRNPC-227ENST00000556897 SH3BGRLO75368 114 aa8.27□□□□□ -1.09
HNRNPC-227ENST00000556897 TRIM3O75382 744 aaPredicted RBP8.27□□□□□ -1.09
HNRNPC-227ENST00000556897 GOSR1O95249 250 aa8.27□□□□□ -1.09
HNRNPC-227ENST00000556897 ACSL3O95573 720 aa8.27□□□□□ -1.09
HNRNPC-227ENST00000556897 FBXO45P0C2W1 286 aa8.27□□□□□ -1.09
HNRNPC-227ENST00000556897 CD22P20273 847 aa8.27□□□□□ -1.09
HNRNPC-227ENST00000556897 ATP5A1P25705 553 aaKnown RBP8.27□□□□□ -1.09
HNRNPC-227ENST00000556897 CTSSP25774 331 aa8.27□□□□□ -1.09
HNRNPC-227ENST00000556897 OPRM1P35372 400 aa8.27□□□□□ -1.09
HNRNPC-227ENST00000556897 FBXO48Q5FWF7 155 aa8.27□□□□□ -1.09
HNRNPC-227ENST00000556897 HP1BP3Q5SSJ5 553 aaPredicted RBP8.27□□□□□ -1.09
HNRNPC-227ENST00000556897 RNASEH2BQ5TBB1 312 aaKnown RBP8.27□□□□□ -1.09
HNRNPC-227ENST00000556897 BICRALQ6AI39 1079 aa8.27□□□□□ -1.09
HNRNPC-227ENST00000556897 TRMT10BQ6PF06 316 aaKnown RBP8.27□□□□□ -1.09
HNRNPC-227ENST00000556897 TMEM64Q6YI46 380 aa8.27□□□□□ -1.09
HNRNPC-227ENST00000556897 FRA10AC1Q70Z53 315 aa8.27□□□□□ -1.09
HNRNPC-227ENST00000556897 ADAMTSL2Q86TH1 951 aa8.27□□□□□ -1.09
HNRNPC-227ENST00000556897 P3H2Q8IVL5 708 aa8.27□□□□□ -1.09
HNRNPC-227ENST00000556897 PM20D2Q8IYS1 436 aa8.27□□□□□ -1.09
HNRNPC-227ENST00000556897 SLC15A4Q8N697 577 aa8.27□□□□□ -1.09
HNRNPC-227ENST00000556897 ANKRD49Q8WVL7 239 aa8.27□□□□□ -1.09
HNRNPC-227ENST00000556897 ANKRD7Q92527 254 aa8.27□□□□□ -1.09
HNRNPC-227ENST00000556897 ZNF592Q92610 1267 aa8.27□□□□□ -1.09
HNRNPC-227ENST00000556897 DIO2Q92813 273 aa8.27□□□□□ -1.09
HNRNPC-227ENST00000556897 RBM18Q96H35 190 aaKnown RBP8.27□□□□□ -1.09
HNRNPC-227ENST00000556897 MS4A14Q96JA4 679 aa8.27□□□□□ -1.09
HNRNPC-227ENST00000556897 ZNF597Q96LX8 424 aa8.27□□□□□ -1.09
HNRNPC-227ENST00000556897 DACH2Q96NX9 599 aa8.27□□□□□ -1.09
HNRNPC-227ENST00000556897 PITHD1Q9GZP4 211 aaPredicted RBP8.27□□□□□ -1.09
HNRNPC-227ENST00000556897 PRDM14Q9GZV8 571 aa8.27□□□□□ -1.09
HNRNPC-227ENST00000556897 EHD1Q9H4M9 534 aa8.27□□□□□ -1.09
HNRNPC-227ENST00000556897 GPRC5BQ9NZH0 403 aa8.27□□□□□ -1.09
HNRNPC-227ENST00000556897 JKAMPQ9P055 326 aa8.27□□□□□ -1.09
HNRNPC-227ENST00000556897 CORO1CQ9ULV4 474 aaPredicted RBP8.27□□□□□ -1.09
HNRNPC-227ENST00000556897 CAMK2AQ9UQM7 478 aa8.27□□□□□ -1.09
HNRNPC-227ENST00000556897 SPACA6W5XKT8 324 aa8.27□□□□□ -1.09
HNRNPC-227ENST00000556897 SONP18583 2426 aaKnown RBP8.27□□□□□ -1.09
HNRNPC-227ENST00000556897 ZANQ9Y493 2812 aa8.26□□□□□ -1.09
HNRNPC-227ENST00000556897 IQANK1A0A1B0GTG1 560 aa8.26□□□□□ -1.09
HNRNPC-227ENST00000556897 SH3D21A4FU49 640 aa8.26□□□□□ -1.09
HNRNPC-227ENST00000556897 MBD3L4A6NDZ8 208 aaPredicted RBP8.26□□□□□ -1.09
HNRNPC-227ENST00000556897 MBD3L3A6NE82 208 aaPredicted RBP8.26□□□□□ -1.09
HNRNPC-227ENST00000556897 MBD3L5A6NJ08 208 aaPredicted RBP8.26□□□□□ -1.09
HNRNPC-227ENST00000556897 CLGNO14967 610 aa8.26□□□□□ -1.09
HNRNPC-227ENST00000556897 SMAD7O15105 426 aaKnown RBP8.26□□□□□ -1.09
HNRNPC-227ENST00000556897 TAPBPO15533 448 aa8.26□□□□□ -1.09
HNRNPC-227ENST00000556897 DYRK3O43781 588 aa8.26□□□□□ -1.09
HNRNPC-227ENST00000556897 BMP7P18075 431 aa8.26□□□□□ -1.09
HNRNPC-227ENST00000556897 HIST1H1TP22492 207 aaPredicted RBP8.26□□□□□ -1.09
HNRNPC-227ENST00000556897 CPN2P22792 545 aa8.26□□□□□ -1.09
HNRNPC-227ENST00000556897 HERVK_113P63132 956 aa8.26□□□□□ -1.09
HNRNPC-227ENST00000556897 ERVK-8P63133 956 aa8.26□□□□□ -1.09
HNRNPC-227ENST00000556897 IGLV3-21P80748 117 aaPredicted RBP8.26□□□□□ -1.09
HNRNPC-227ENST00000556897 PLIN5Q00G26 463 aa8.26□□□□□ -1.09
HNRNPC-227ENST00000556897 FOXF2Q12947 444 aa8.26□□□□□ -1.09
HNRNPC-227ENST00000556897 DOC2AQ14183 400 aa8.26□□□□□ -1.09
HNRNPC-227ENST00000556897 TOMM20Q15388 145 aa8.26□□□□□ -1.09
HNRNPC-227ENST00000556897 SF3B4Q15427 424 aaKnown RBP eCLIP8.26□□□□□ -1.094e-9■■□□□ 12
HNRNPC-227ENST00000556897 NTRK2Q16620 822 aa8.26□□□□□ -1.09
HNRNPC-227ENST00000556897 CYP1B1Q16678 543 aa8.26□□□□□ -1.09
HNRNPC-227ENST00000556897 EIPR1Q53HC9 387 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms