RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 A0A1B0GTL3 188 aa13.14□□□□□ -0.31
SLIRP-207ENST00000556831 MYOCOSA0A1B0GUC4 107 aa13.14□□□□□ -0.31
SLIRP-207ENST00000556831 GOLGA6L10A6NI86 522 aa13.14□□□□□ -0.31
SLIRP-207ENST00000556831 GLOD5A6NK44 160 aa13.14□□□□□ -0.31
SLIRP-207ENST00000556831 TGFBR3LH3BV60 316 aa13.14□□□□□ -0.31
SLIRP-207ENST00000556831 TRIM13O60858 407 aa13.14□□□□□ -0.31
SLIRP-207ENST00000556831 UQCRFS1P47985 274 aa13.14□□□□□ -0.31
SLIRP-207ENST00000556831 CYB561P49447 251 aa13.14□□□□□ -0.31
SLIRP-207ENST00000556831 TUBA3CQ13748 450 aa13.14□□□□□ -0.31
SLIRP-207ENST00000556831 OR1C1Q15619 314 aa13.14□□□□□ -0.31
SLIRP-207ENST00000556831 ZNF766Q5HY98 468 aa13.14□□□□□ -0.31
SLIRP-207ENST00000556831 TCHHL1Q5QJ38 904 aaPredicted RBP13.14□□□□□ -0.31
SLIRP-207ENST00000556831 NDUFAF5Q5TEU4 345 aa13.14□□□□□ -0.31
SLIRP-207ENST00000556831 MRM1Q6IN84 353 aaKnown RBP13.14□□□□□ -0.31
SLIRP-207ENST00000556831 TUBA3EQ6PEY2 450 aa13.14□□□□□ -0.31
SLIRP-207ENST00000556831 C10orf107Q8IVU9 208 aa13.14□□□□□ -0.31
SLIRP-207ENST00000556831 OR4N5Q8IXE1 308 aa13.14□□□□□ -0.31
SLIRP-207ENST00000556831 ST13P4Q8IZP2 240 aaPredicted RBP13.14□□□□□ -0.31
SLIRP-207ENST00000556831 TMEM156Q8N614 296 aa13.14□□□□□ -0.31
SLIRP-207ENST00000556831 C1orf52Q8N6N3 182 aaKnown RBP13.14□□□□□ -0.31
SLIRP-207ENST00000556831 BCORP1Q8N888 145 aa13.14□□□□□ -0.31
SLIRP-207ENST00000556831 NFAM1Q8NET5 270 aaPredicted RBP13.14□□□□□ -0.31
SLIRP-207ENST00000556831 OR5L2Q8NGL0 311 aa13.14□□□□□ -0.31
SLIRP-207ENST00000556831 PPP1R14CQ8TAE6 165 aa13.14□□□□□ -0.31
SLIRP-207ENST00000556831 SLC2A12Q8TD20 617 aa13.14□□□□□ -0.31
SLIRP-207ENST00000556831 C19orf60Q96EN9 201 aa13.14□□□□□ -0.31
SLIRP-207ENST00000556831 ZNF717Q9BY31 904 aaPredicted RBP13.14□□□□□ -0.31
SLIRP-207ENST00000556831 EML4Q9HC35 981 aaKnown RBP13.14□□□□□ -0.31
SLIRP-207ENST00000556831 ASF1BQ9NVP2 202 aa13.14□□□□□ -0.31
SLIRP-207ENST00000556831 ZNF225Q9UK10 706 aa13.14□□□□□ -0.31
SLIRP-207ENST00000556831 PSME2Q9UL46 239 aa13.14□□□□□ -0.31
SLIRP-207ENST00000556831 ASB4Q9Y574 426 aa13.14□□□□□ -0.31
SLIRP-207ENST00000556831 TIMM22Q9Y584 194 aa13.14□□□□□ -0.31
SLIRP-207ENST00000556831 A0A1W2PR48 441 aa13.13□□□□□ -0.31
SLIRP-207ENST00000556831 C1orf226A1L170 272 aa13.13□□□□□ -0.31
SLIRP-207ENST00000556831 PCDH7O60245 1069 aa13.13□□□□□ -0.31
SLIRP-207ENST00000556831 PRKRAO75569 313 aaKnown RBP13.13□□□□□ -0.31
SLIRP-207ENST00000556831 RASAL1O95294 804 aa13.13□□□□□ -0.31
SLIRP-207ENST00000556831 GPR75O95800 540 aa13.13□□□□□ -0.31
SLIRP-207ENST00000556831 CRYABP02511 175 aaKnown RBP13.13□□□□□ -0.31
SLIRP-207ENST00000556831 UROSP10746 265 aa13.13□□□□□ -0.31
SLIRP-207ENST00000556831 TPP2P29144 1249 aaPredicted RBP13.13□□□□□ -0.31
SLIRP-207ENST00000556831 ALDH9A1P49189 494 aa13.13□□□□□ -0.31
SLIRP-207ENST00000556831 SSR4P51571 173 aa13.13□□□□□ -0.31
SLIRP-207ENST00000556831 ZNF844Q08AG5 666 aa13.13□□□□□ -0.31
SLIRP-207ENST00000556831 PCLAFQ15004 111 aa13.13□□□□□ -0.31
SLIRP-207ENST00000556831 CEP85LQ5SZL2 805 aa13.13□□□□□ -0.31
SLIRP-207ENST00000556831 RPUSD3Q6P087 351 aaKnown RBP13.13□□□□□ -0.31
SLIRP-207ENST00000556831 APCDD1LQ8NCL9 501 aa13.13□□□□□ -0.31
SLIRP-207ENST00000556831 OR4K14Q8NGD5 310 aa13.13□□□□□ -0.31
SLIRP-207ENST00000556831 TCP10LQ8TDR4 215 aa13.13□□□□□ -0.31
SLIRP-207ENST00000556831 ANKRD9Q96BM1 317 aaPredicted RBP13.13□□□□□ -0.31
SLIRP-207ENST00000556831 KCNA7Q96RP8 456 aa13.13□□□□□ -0.31
SLIRP-207ENST00000556831 CNPPD1Q9BV87 410 aa13.13□□□□□ -0.31
SLIRP-207ENST00000556831 ACPTQ9BZG2 426 aa13.13□□□□□ -0.31
SLIRP-207ENST00000556831 C12orf65Q9H3J6 166 aaKnown RBP13.13□□□□□ -0.31
SLIRP-207ENST00000556831 PFDN4Q9NQP4 134 aa13.13□□□□□ -0.31
SLIRP-207ENST00000556831 OLAHQ9NV23 265 aa13.13□□□□□ -0.31
SLIRP-207ENST00000556831 TEX10Q9NXF1 929 aaPredicted RBP13.13□□□□□ -0.31
SLIRP-207ENST00000556831 LRFN1Q9P244 771 aa13.13□□□□□ -0.31
SLIRP-207ENST00000556831 PPIEQ9UNP9 301 aaKnown RBP13.13□□□□□ -0.31
SLIRP-207ENST00000556831 NTNG1Q9Y2I2 539 aa13.13□□□□□ -0.31
SLIRP-207ENST00000556831 RP1L1Q8IWN7 2480 aaPredicted RBP13.12□□□□□ -0.31
SLIRP-207ENST00000556831 MAN1A2O60476 641 aa13.12□□□□□ -0.31
SLIRP-207ENST00000556831 NEFHP12036 1026 aa13.12□□□□□ -0.31
SLIRP-207ENST00000556831 MLF1P58340 268 aa13.12□□□□□ -0.31
SLIRP-207ENST00000556831 TRA2BP62995 288 aaKnown RBP13.12□□□□□ -0.31
SLIRP-207ENST00000556831 IGLV3-21P80748 117 aaPredicted RBP13.12□□□□□ -0.31
SLIRP-207ENST00000556831 SRSF11Q05519 484 aaKnown RBP13.12□□□□□ -0.31
SLIRP-207ENST00000556831 BTKQ06187 659 aa13.12□□□□□ -0.31
SLIRP-207ENST00000556831 SLC29A4Q7RTT9 530 aa13.12□□□□□ -0.31
SLIRP-207ENST00000556831 HDXQ7Z353 690 aa13.12□□□□□ -0.31
SLIRP-207ENST00000556831 CDC26Q8NHZ8 85 aa13.12□□□□□ -0.31
SLIRP-207ENST00000556831 GRHL3Q8TE85 626 aa13.12□□□□□ -0.31
SLIRP-207ENST00000556831 PTPMT1Q8WUK0 201 aaPredicted RBP13.12□□□□□ -0.31
SLIRP-207ENST00000556831 ASB15Q8WXK1 588 aa13.12□□□□□ -0.31
SLIRP-207ENST00000556831 RIT1Q92963 219 aa13.12□□□□□ -0.31
SLIRP-207ENST00000556831 SHCBP1LQ9BZQ2 653 aa13.12□□□□□ -0.31
SLIRP-207ENST00000556831 KLHL1Q9NR64 748 aa13.12□□□□□ -0.31
SLIRP-207ENST00000556831 GIMAP4Q9NUV9 329 aa13.12□□□□□ -0.31
SLIRP-207ENST00000556831 SLC17A7Q9P2U7 560 aa13.12□□□□□ -0.31
SLIRP-207ENST00000556831 MCM8Q9UJA3 840 aa13.12□□□□□ -0.31
SLIRP-207ENST00000556831 ERVK-11Q9UQG0 969 aa13.12□□□□□ -0.31
SLIRP-207ENST00000556831 YARS2Q9Y2Z4 477 aaKnown RBP13.12□□□□□ -0.31
SLIRP-207ENST00000556831 FIS1Q9Y3D6 152 aa13.12□□□□□ -0.31
SLIRP-207ENST00000556831 ZNF780BQ9Y6R6 833 aa13.12□□□□□ -0.31
SLIRP-207ENST00000556831 CNTRLQ7Z7A1 2325 aa13.12□□□□□ -0.31
SLIRP-207ENST00000556831 ITPR2Q14571 2701 aa13.12□□□□□ -0.31
SLIRP-207ENST00000556831 POLQO75417 2590 aa13.11□□□□□ -0.31
SLIRP-207ENST00000556831 A8MVJ9 347 aa13.11□□□□□ -0.31
SLIRP-207ENST00000556831 RGS14O43566 566 aa13.11□□□□□ -0.31
SLIRP-207ENST00000556831 ITGA10O75578 1167 aa13.11□□□□□ -0.31
SLIRP-207ENST00000556831 ERAL1O75616 437 aaKnown RBP13.11□□□□□ -0.31
SLIRP-207ENST00000556831 SLC25A12O75746 678 aa13.11□□□□□ -0.31
SLIRP-207ENST00000556831 SLC35E2P0CK97 266 aa13.11□□□□□ -0.31
SLIRP-207ENST00000556831 ALDH3A1P30838 453 aa13.11□□□□□ -0.31
SLIRP-207ENST00000556831 SERPINB5P36952 375 aa13.11□□□□□ -0.31
SLIRP-207ENST00000556831 CD96P40200 585 aa13.11□□□□□ -0.31
SLIRP-207ENST00000556831 GSTM5P46439 218 aa13.11□□□□□ -0.31
SLIRP-207ENST00000556831 HTR6P50406 440 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms