RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 SERPINB12Q96P63 405 aa12.75□□□□□ -0.37
ACTN1-219ENST00000556432 SFXN3Q9BWM7 321 aa12.75□□□□□ -0.37
ACTN1-219ENST00000556432 CALHM2Q9HA72 323 aa12.75□□□□□ -0.37
ACTN1-219ENST00000556432 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.75□□□□□ -0.37
ACTN1-219ENST00000556432 CNOT11Q9UKZ1 510 aaKnown RBP12.75□□□□□ -0.37
ACTN1-219ENST00000556432 DOCK7Q96N67 2140 aa12.74□□□□□ -0.37
ACTN1-219ENST00000556432 CLEC3AO75596 197 aa12.74□□□□□ -0.37
ACTN1-219ENST00000556432 FGGP02679 453 aa12.74□□□□□ -0.37
ACTN1-219ENST00000556432 FBXO45P0C2W1 286 aa12.74□□□□□ -0.37
ACTN1-219ENST00000556432 MLNP12872 115 aa12.74□□□□□ -0.37
ACTN1-219ENST00000556432 CYP4B1P13584 511 aa12.74□□□□□ -0.37
ACTN1-219ENST00000556432 GSTM2P28161 218 aa12.74□□□□□ -0.37
ACTN1-219ENST00000556432 MAGEA6P43360 314 aa12.74□□□□□ -0.37
ACTN1-219ENST00000556432 FOXF2Q12947 444 aa12.74□□□□□ -0.37
ACTN1-219ENST00000556432 TBCELQ5QJ74 424 aa12.74□□□□□ -0.37
ACTN1-219ENST00000556432 DCST1Q5T197 706 aa12.74□□□□□ -0.37
ACTN1-219ENST00000556432 ABHD17CQ6PCB6 329 aa12.74□□□□□ -0.37
ACTN1-219ENST00000556432 LYPD8Q6UX82 237 aa12.74□□□□□ -0.37
ACTN1-219ENST00000556432 OR4N5Q8IXE1 308 aa12.74□□□□□ -0.37
ACTN1-219ENST00000556432 PHC2Q8IXK0 858 aa12.74□□□□□ -0.37
ACTN1-219ENST00000556432 DOK4Q8TEW6 326 aa12.74□□□□□ -0.37
ACTN1-219ENST00000556432 MAIP1Q8WWC4 291 aa12.74□□□□□ -0.37
ACTN1-219ENST00000556432 ABTB1Q969K4 478 aaPredicted RBP12.74□□□□□ -0.37
ACTN1-219ENST00000556432 PPWD1Q96BP3 646 aaKnown RBP12.74□□□□□ -0.37
ACTN1-219ENST00000556432 INTS12Q96CB8 462 aaKnown RBP12.74□□□□□ -0.37
ACTN1-219ENST00000556432 WDYHV1Q96HA8 205 aa12.74□□□□□ -0.37
ACTN1-219ENST00000556432 ART5Q96L15 291 aa12.74□□□□□ -0.37
ACTN1-219ENST00000556432 GNRHR2Q96P88 292 aa12.74□□□□□ -0.37
ACTN1-219ENST00000556432 UGT2B28Q9BY64 529 aa12.74□□□□□ -0.37
ACTN1-219ENST00000556432 LYRM4Q9HD34 91 aa12.74□□□□□ -0.37
ACTN1-219ENST00000556432 ZKSCAN5Q9Y2L8 839 aa12.74□□□□□ -0.37
ACTN1-219ENST00000556432 TESMINQ9Y4I5 508 aa12.74□□□□□ -0.37
ACTN1-219ENST00000556432 CHD3Q12873 2000 aaKnown RBP12.74□□□□□ -0.37
ACTN1-219ENST00000556432 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.73□□□□□ -0.37
ACTN1-219ENST00000556432 IQANK1A0A1B0GTG1 560 aa12.73□□□□□ -0.37
ACTN1-219ENST00000556432 NPEPPSL1A6NEC2 478 aa12.73□□□□□ -0.37
ACTN1-219ENST00000556432 HRKO00198 91 aa12.73□□□□□ -0.37
ACTN1-219ENST00000556432 TP53I11O14683 189 aa12.73□□□□□ -0.37
ACTN1-219ENST00000556432 CLGNO14967 610 aa12.73□□□□□ -0.37
ACTN1-219ENST00000556432 SNPHO15079 494 aa12.73□□□□□ -0.37
ACTN1-219ENST00000556432 TRIM3O75382 744 aaPredicted RBP12.73□□□□□ -0.37
ACTN1-219ENST00000556432 CCDC175P0C221 793 aa12.73□□□□□ -0.37
ACTN1-219ENST00000556432 NID1P14543 1247 aa12.73□□□□□ -0.37
ACTN1-219ENST00000556432 GCKP35557 465 aa12.73□□□□□ -0.37
ACTN1-219ENST00000556432 KCNC1P48547 511 aa12.73□□□□□ -0.37
ACTN1-219ENST00000556432 DIO3P55073 304 aa12.73□□□□□ -0.37
ACTN1-219ENST00000556432 PLIN5Q00G26 463 aa12.73□□□□□ -0.37
ACTN1-219ENST00000556432 EIPR1Q53HC9 387 aa12.73□□□□□ -0.37
ACTN1-219ENST00000556432 WIPI1Q5MNZ9 446 aaPredicted RBP12.73□□□□□ -0.37
ACTN1-219ENST00000556432 BICRALQ6AI39 1079 aa12.73□□□□□ -0.37
ACTN1-219ENST00000556432 SBSNQ6UWP8 590 aa12.73□□□□□ -0.37
ACTN1-219ENST00000556432 TMEM64Q6YI46 380 aa12.73□□□□□ -0.37
ACTN1-219ENST00000556432 SLCO4C1Q6ZQN7 724 aa12.73□□□□□ -0.37
ACTN1-219ENST00000556432 FRA10AC1Q70Z53 315 aa12.73□□□□□ -0.37
ACTN1-219ENST00000556432 PACS2Q86VP3 889 aa12.73□□□□□ -0.37
ACTN1-219ENST00000556432 GCNT2Q8N0V5 402 aa12.73□□□□□ -0.37
ACTN1-219ENST00000556432 TAGAPQ8N103 731 aa12.73□□□□□ -0.37
ACTN1-219ENST00000556432 ZNF441Q8N8Z8 693 aa12.73□□□□□ -0.37
ACTN1-219ENST00000556432 SLC44A1Q8WWI5 657 aa12.73□□□□□ -0.37
ACTN1-219ENST00000556432 ANKRD9Q96BM1 317 aaPredicted RBP12.73□□□□□ -0.37
ACTN1-219ENST00000556432 RBM18Q96H35 190 aaKnown RBP12.73□□□□□ -0.37
ACTN1-219ENST00000556432 RILPQ96NA2 401 aa12.73□□□□□ -0.37
ACTN1-219ENST00000556432 KCNC2Q96PR1 638 aa12.73□□□□□ -0.37
ACTN1-219ENST00000556432 F2RL3Q96RI0 385 aa12.73□□□□□ -0.37
ACTN1-219ENST00000556432 TM9SF2Q99805 663 aa12.73□□□□□ -0.37
ACTN1-219ENST00000556432 BAG1Q99933 345 aaPredicted RBP12.73□□□□□ -0.37
ACTN1-219ENST00000556432 MAPKAP1Q9BPZ7 522 aa12.73□□□□□ -0.37
ACTN1-219ENST00000556432 MED18Q9BUE0 208 aa12.73□□□□□ -0.37
ACTN1-219ENST00000556432 ROGDIQ9GZN7 287 aa12.73□□□□□ -0.37
ACTN1-219ENST00000556432 PPANQ9NQ55 473 aaKnown RBP12.73□□□□□ -0.37
ACTN1-219ENST00000556432 KLHL28Q9NXS3 571 aa12.73□□□□□ -0.37
ACTN1-219ENST00000556432 ZNF226Q9NYT6 803 aa12.73□□□□□ -0.37
ACTN1-219ENST00000556432 IKZF3Q9UKT9 509 aa12.73□□□□□ -0.37
ACTN1-219ENST00000556432 C15orf41Q9Y2V0 281 aa12.73□□□□□ -0.37
ACTN1-219ENST00000556432 NPFFR2Q9Y5X5 522 aa12.73□□□□□ -0.37
ACTN1-219ENST00000556432 CAPN14A8MX76 684 aa12.72□□□□□ -0.37
ACTN1-219ENST00000556432 H0Y3Z8 333 aa12.72□□□□□ -0.37
ACTN1-219ENST00000556432 CTIFO43310 598 aaKnown RBP12.72□□□□□ -0.37
ACTN1-219ENST00000556432 FGF17O60258 216 aa12.72□□□□□ -0.37
ACTN1-219ENST00000556432 IFNA2P01563 188 aa12.72□□□□□ -0.37
ACTN1-219ENST00000556432 KRT14P02533 472 aa12.72□□□□□ -0.37
ACTN1-219ENST00000556432 IGKV3-11P04433 115 aa12.72□□□□□ -0.37
ACTN1-219ENST00000556432 HPNP05981 417 aa12.72□□□□□ -0.37
ACTN1-219ENST00000556432 CPN2P22792 545 aa12.72□□□□□ -0.37
ACTN1-219ENST00000556432 GABRB3P28472 473 aa12.72□□□□□ -0.37
ACTN1-219ENST00000556432 GDF5P43026 501 aa12.72□□□□□ -0.37
ACTN1-219ENST00000556432 STT3AP46977 705 aa12.72□□□□□ -0.37
ACTN1-219ENST00000556432 PTH2RP49190 550 aa12.72□□□□□ -0.37
ACTN1-219ENST00000556432 SRYQ05066 204 aa12.72□□□□□ -0.37
ACTN1-219ENST00000556432 DMTNQ08495 405 aa12.72□□□□□ -0.37
ACTN1-219ENST00000556432 CRYMQ14894 314 aa12.72□□□□□ -0.37
ACTN1-219ENST00000556432 NTRK2Q16620 822 aa12.72□□□□□ -0.37
ACTN1-219ENST00000556432 PPP1R3AQ16821 1122 aa12.72□□□□□ -0.37
ACTN1-219ENST00000556432 C18orf21Q32NC0 220 aaPredicted RBP12.72□□□□□ -0.37
ACTN1-219ENST00000556432 ADPRMQ3LIE5 342 aa12.72□□□□□ -0.37
ACTN1-219ENST00000556432 ADNP2Q6IQ32 1131 aa12.72□□□□□ -0.37
ACTN1-219ENST00000556432 RNF111Q6ZNA4 994 aa12.72□□□□□ -0.37
ACTN1-219ENST00000556432 C20orf204Q6ZNR8 217 aa12.72□□□□□ -0.37
ACTN1-219ENST00000556432 MCUQ8NE86 351 aa12.72□□□□□ -0.37
ACTN1-219ENST00000556432 TMEM158Q8WZ71 300 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms