RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 C9orf40Q8IXQ3 194 aa11.74□□□□□ -0.53
HNRNPC-221ENST00000555883 MARVELD2Q8N4S9 558 aa11.74□□□□□ -0.53
HNRNPC-221ENST00000555883 LILRB4Q8NHJ6 448 aa11.74□□□□□ -0.53
HNRNPC-221ENST00000555883 PAQR8Q8TEZ7 354 aa11.74□□□□□ -0.53
HNRNPC-221ENST00000555883 RND1Q92730 232 aa11.74□□□□□ -0.53
HNRNPC-221ENST00000555883 MTERF1Q99551 399 aaKnown RBP11.74□□□□□ -0.53
HNRNPC-221ENST00000555883 IPPKQ9H8X2 491 aa11.74□□□□□ -0.53
HNRNPC-221ENST00000555883 ATG4BQ9Y4P1 393 aa11.74□□□□□ -0.53
HNRNPC-221ENST00000555883 ASB4Q9Y574 426 aa11.74□□□□□ -0.53
HNRNPC-221ENST00000555883 HRH3Q9Y5N1 445 aa11.74□□□□□ -0.53
HNRNPC-221ENST00000555883 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.74□□□□□ -0.53
HNRNPC-221ENST00000555883 FIGNL2A6NMB9 653 aa11.73□□□□□ -0.53
HNRNPC-221ENST00000555883 STX16-NPEPL1H3BU86 382 aa11.73□□□□□ -0.53
HNRNPC-221ENST00000555883 AQP7O14520 342 aa11.73□□□□□ -0.53
HNRNPC-221ENST00000555883 STX16O14662 325 aa11.73□□□□□ -0.53
HNRNPC-221ENST00000555883 ZNHIT1O43257 154 aa11.73□□□□□ -0.53
HNRNPC-221ENST00000555883 HCN1O60741 890 aa11.73□□□□□ -0.53
HNRNPC-221ENST00000555883 ZNF354AO60765 605 aaPredicted RBP11.73□□□□□ -0.53
HNRNPC-221ENST00000555883 CLDN9O95484 217 aa11.73□□□□□ -0.53
HNRNPC-221ENST00000555883 GPR75O95800 540 aa11.73□□□□□ -0.53
HNRNPC-221ENST00000555883 RBP1P09455 135 aa11.73□□□□□ -0.53
HNRNPC-221ENST00000555883 COL6A2P12110 1019 aa11.73□□□□□ -0.53
HNRNPC-221ENST00000555883 HNRNPH2P55795 449 aaKnown RBP11.73□□□□□ -0.53
HNRNPC-221ENST00000555883 RPS13P62277 151 aaKnown RBP11.73□□□□□ -0.53
HNRNPC-221ENST00000555883 ID2Q02363 134 aa11.73□□□□□ -0.53
HNRNPC-221ENST00000555883 DDX39BQ13838 428 aaKnown RBP11.73□□□□□ -0.53
HNRNPC-221ENST00000555883 ZNF750Q32MQ0 723 aa11.73□□□□□ -0.53
HNRNPC-221ENST00000555883 TECRLQ5HYJ1 363 aa11.73□□□□□ -0.53
HNRNPC-221ENST00000555883 FAM47EQ6ZV65 393 aa11.73□□□□□ -0.53
HNRNPC-221ENST00000555883 TRILQ7L0X0 811 aa11.73□□□□□ -0.53
HNRNPC-221ENST00000555883 GOLGA7Q7Z5G4 137 aa11.73□□□□□ -0.53
HNRNPC-221ENST00000555883 NUDT13Q86X67 352 aa11.73□□□□□ -0.53
HNRNPC-221ENST00000555883 MYLK4Q86YV6 388 aaPredicted RBP11.73□□□□□ -0.53
HNRNPC-221ENST00000555883 TMEM251Q8N6I4 163 aa11.73□□□□□ -0.53
HNRNPC-221ENST00000555883 SLC44A1Q8WWI5 657 aa11.73□□□□□ -0.53
HNRNPC-221ENST00000555883 SPACA9Q96E40 222 aaPredicted RBP11.73□□□□□ -0.53
HNRNPC-221ENST00000555883 LRRC1Q9BTT6 524 aa11.73□□□□□ -0.53
HNRNPC-221ENST00000555883 NTMT1Q9BV86 223 aa11.73□□□□□ -0.53
HNRNPC-221ENST00000555883 DEFB127Q9H1M4 99 aa11.73□□□□□ -0.53
HNRNPC-221ENST00000555883 WDR41Q9HAD4 459 aa11.73□□□□□ -0.53
HNRNPC-221ENST00000555883 QPCTLQ9NXS2 382 aa11.73□□□□□ -0.53
HNRNPC-221ENST00000555883 CNIH4Q9P003 139 aa11.73□□□□□ -0.53
HNRNPC-221ENST00000555883 MTRF1LQ9UGC7 380 aaKnown RBP11.73□□□□□ -0.53
HNRNPC-221ENST00000555883 PCDHGB3Q9Y5G1 929 aa11.73□□□□□ -0.53
HNRNPC-221ENST00000555883 CELSR1Q9NYQ6 3014 aa11.72□□□□□ -0.53
HNRNPC-221ENST00000555883 A0A0G2JMM0 328 aa11.72□□□□□ -0.53
HNRNPC-221ENST00000555883 MYOCOSA0A1B0GUC4 107 aa11.72□□□□□ -0.53
HNRNPC-221ENST00000555883 A0A1W2PPB8 328 aa11.72□□□□□ -0.53
HNRNPC-221ENST00000555883 A0A1W2PRS3 328 aa11.72□□□□□ -0.53
HNRNPC-221ENST00000555883 ESYT3A0FGR9 886 aa11.72□□□□□ -0.53
HNRNPC-221ENST00000555883 ANKRD33BA6NCL7 494 aa11.72□□□□□ -0.53
HNRNPC-221ENST00000555883 FAM166BA8MTA8 275 aa11.72□□□□□ -0.53
HNRNPC-221ENST00000555883 KIR3DP1A8MWS1 328 aa11.72□□□□□ -0.53
HNRNPC-221ENST00000555883 FOXO6A8MYZ6 492 aa11.72□□□□□ -0.53
HNRNPC-221ENST00000555883 EEDO75530 441 aaKnown RBP11.72□□□□□ -0.53
HNRNPC-221ENST00000555883 PDE9AO76083 593 aa11.72□□□□□ -0.53
HNRNPC-221ENST00000555883 NADKO95544 446 aaPredicted RBP11.72□□□□□ -0.53
HNRNPC-221ENST00000555883 HOXD4P09016 255 aaPredicted RBP11.72□□□□□ -0.53
HNRNPC-221ENST00000555883 FBXO45P0C2W1 286 aa11.72□□□□□ -0.53
HNRNPC-221ENST00000555883 FAM58BPP0C7Q3 252 aa11.72□□□□□ -0.53
HNRNPC-221ENST00000555883 SLC35E2P0CK97 266 aa11.72□□□□□ -0.53
HNRNPC-221ENST00000555883 CCL3P10147 92 aa11.72□□□□□ -0.53
HNRNPC-221ENST00000555883 NR2F6P10588 404 aa11.72□□□□□ -0.53
HNRNPC-221ENST00000555883 CNTFP26441 200 aa11.72□□□□□ -0.53
HNRNPC-221ENST00000555883 SERPINB9P50453 376 aa11.72□□□□□ -0.53
HNRNPC-221ENST00000555883 SLC37A1P57057 533 aa11.72□□□□□ -0.53
HNRNPC-221ENST00000555883 SLC7A5Q01650 507 aa11.72□□□□□ -0.53
HNRNPC-221ENST00000555883 TFF3Q07654 80 aa11.72□□□□□ -0.53
HNRNPC-221ENST00000555883 ASPHQ12797 758 aa11.72□□□□□ -0.53
HNRNPC-221ENST00000555883 CPSF6Q16630 551 aaKnown RBP eCLIP11.72□□□□□ -0.533e-7■■■□□ 15.6
HNRNPC-221ENST00000555883 WHAMMP3Q1A5X7 153 aa11.72□□□□□ -0.53
HNRNPC-221ENST00000555883 TSNAXIP1Q2TAA8 658 aa11.72□□□□□ -0.53
HNRNPC-221ENST00000555883 GGTA1PQ4G0N0 100 aa11.72□□□□□ -0.53
HNRNPC-221ENST00000555883 GXYLT1Q4G148 440 aa11.72□□□□□ -0.53
HNRNPC-221ENST00000555883 SLC22A10Q63ZE4 541 aa11.72□□□□□ -0.53
HNRNPC-221ENST00000555883 C18orf63Q68DL7 685 aa11.72□□□□□ -0.53
HNRNPC-221ENST00000555883 OR52E8Q6IFG1 317 aa11.72□□□□□ -0.53
HNRNPC-221ENST00000555883 ADGRD1Q6QNK2 874 aa11.72□□□□□ -0.53
HNRNPC-221ENST00000555883 CYP20A1Q6UW02 462 aa11.72□□□□□ -0.53
HNRNPC-221ENST00000555883 LYPD8Q6UX82 237 aa11.72□□□□□ -0.53
HNRNPC-221ENST00000555883 TAOK1Q7L7X3 1001 aa11.72□□□□□ -0.53
HNRNPC-221ENST00000555883 SLC29A4Q7RTT9 530 aa11.72□□□□□ -0.53
HNRNPC-221ENST00000555883 OR4N5Q8IXE1 308 aa11.72□□□□□ -0.53
HNRNPC-221ENST00000555883 FBXW8Q8N3Y1 598 aa11.72□□□□□ -0.53
HNRNPC-221ENST00000555883 RNF175Q8N4F7 328 aa11.72□□□□□ -0.53
HNRNPC-221ENST00000555883 SMC6Q96SB8 1091 aa11.72□□□□□ -0.53
HNRNPC-221ENST00000555883 SERPINI1Q99574 410 aa11.72□□□□□ -0.53
HNRNPC-221ENST00000555883 SORBS1Q9BX66 1292 aaKnown RBP11.72□□□□□ -0.53
HNRNPC-221ENST00000555883 WWTR1Q9GZV5 400 aa11.72□□□□□ -0.53
HNRNPC-221ENST00000555883 SLC24A3Q9HC58 644 aa11.72□□□□□ -0.53
HNRNPC-221ENST00000555883 PRM3Q9NNZ6 103 aa11.72□□□□□ -0.53
HNRNPC-221ENST00000555883 NINJ2Q9NZG7 142 aa11.72□□□□□ -0.53
HNRNPC-221ENST00000555883 ZNF180Q9UJW8 692 aa11.72□□□□□ -0.53
HNRNPC-221ENST00000555883 ADAM29Q9UKF5 820 aa11.72□□□□□ -0.53
HNRNPC-221ENST00000555883 RNF6Q9Y252 685 aa11.72□□□□□ -0.53
HNRNPC-221ENST00000555883 IQANK1A0A1B0GTG1 560 aa11.71□□□□□ -0.53
HNRNPC-221ENST00000555883 A0A1W2PR48 441 aa11.71□□□□□ -0.53
HNRNPC-221ENST00000555883 FAM47E-STBD1D6RA91 191 aa11.71□□□□□ -0.53
HNRNPC-221ENST00000555883 OR7A17O14581 309 aa11.71□□□□□ -0.53
HNRNPC-221ENST00000555883 TMPRSS11DO60235 418 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms