RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 CFLARO15519 480 aa11.69□□□□□ -0.54
SHMT2-221ENST00000555773 PGRP06401 933 aa11.69□□□□□ -0.54
SHMT2-221ENST00000555773 UMODP07911 640 aa11.69□□□□□ -0.54
SHMT2-221ENST00000555773 C8orf89P0DMQ9 161 aa11.69□□□□□ -0.54
SHMT2-221ENST00000555773 CPMP14384 443 aa11.69□□□□□ -0.54
SHMT2-221ENST00000555773 MAOAP21397 527 aa11.69□□□□□ -0.54
SHMT2-221ENST00000555773 F8A1P23610 371 aa11.69□□□□□ -0.54
SHMT2-221ENST00000555773 MMP11P24347 488 aa11.69□□□□□ -0.54
SHMT2-221ENST00000555773 NTSP30990 170 aa11.69□□□□□ -0.54
SHMT2-221ENST00000555773 FRKP42685 505 aaPredicted RBP11.69□□□□□ -0.54
SHMT2-221ENST00000555773 STT3AP46977 705 aa11.69□□□□□ -0.54
SHMT2-221ENST00000555773 KCNK10P57789 538 aa11.69□□□□□ -0.54
SHMT2-221ENST00000555773 KLF10Q13118 480 aa11.69□□□□□ -0.54
SHMT2-221ENST00000555773 CLN3Q13286 438 aa11.69□□□□□ -0.54
SHMT2-221ENST00000555773 MLC1Q15049 377 aa11.69□□□□□ -0.54
SHMT2-221ENST00000555773 MAPRE2Q15555 327 aa11.69□□□□□ -0.54
SHMT2-221ENST00000555773 TGIF1Q15583 401 aa11.69□□□□□ -0.54
SHMT2-221ENST00000555773 FAM174BQ3ZCQ3 159 aa11.69□□□□□ -0.54
SHMT2-221ENST00000555773 CPZQ66K79 652 aa11.69□□□□□ -0.54
SHMT2-221ENST00000555773 SHISA6Q6ZSJ9 500 aa11.69□□□□□ -0.54
SHMT2-221ENST00000555773 MSANTD1Q6ZTZ1 278 aa11.69□□□□□ -0.54
SHMT2-221ENST00000555773 FUNDC1Q8IVP5 155 aa11.69□□□□□ -0.54
SHMT2-221ENST00000555773 LRRC25Q8N386 305 aaPredicted RBP11.69□□□□□ -0.54
SHMT2-221ENST00000555773 ZFP28Q8NHY6 868 aa11.69□□□□□ -0.54
SHMT2-221ENST00000555773 KCNE4Q8WWG9 221 aa11.69□□□□□ -0.54
SHMT2-221ENST00000555773 GATA6Q92908 595 aa11.69□□□□□ -0.54
SHMT2-221ENST00000555773 CNRIP1Q96F85 164 aaPredicted RBP11.69□□□□□ -0.54
SHMT2-221ENST00000555773 ZBED6CLQ96FA7 236 aaPredicted RBP11.69□□□□□ -0.54
SHMT2-221ENST00000555773 IP6K3Q96PC2 410 aa11.69□□□□□ -0.54
SHMT2-221ENST00000555773 CCDC106Q9BWC9 280 aa11.69□□□□□ -0.54
SHMT2-221ENST00000555773 NECTIN3Q9NQS3 549 aa11.69□□□□□ -0.54
SHMT2-221ENST00000555773 FAM120CQ9NX05 1096 aaKnown RBP11.69□□□□□ -0.54
SHMT2-221ENST00000555773 CCDC167Q9P0B6 97 aa11.69□□□□□ -0.54
SHMT2-221ENST00000555773 C5AR2Q9P296 337 aa11.69□□□□□ -0.54
SHMT2-221ENST00000555773 CLDN16Q9Y5I7 305 aa11.69□□□□□ -0.54
SHMT2-221ENST00000555773 CAPN7Q9Y6W3 813 aa11.69□□□□□ -0.54
SHMT2-221ENST00000555773 LOC102723996A0A087X1L8 192 aa11.68□□□□□ -0.54
SHMT2-221ENST00000555773 A0A1W2PRB8 838 aa11.68□□□□□ -0.54
SHMT2-221ENST00000555773 OR2W5A6NFC9 320 aa11.68□□□□□ -0.54
SHMT2-221ENST00000555773 RNASET2O00584 256 aaKnown RBP11.68□□□□□ -0.54
SHMT2-221ENST00000555773 PDPK1O15530 556 aa11.68□□□□□ -0.54
SHMT2-221ENST00000555773 DYRK3O43781 588 aa11.68□□□□□ -0.54
SHMT2-221ENST00000555773 OR10H2O60403 315 aa11.68□□□□□ -0.54
SHMT2-221ENST00000555773 CREG1O75629 220 aa11.68□□□□□ -0.54
SHMT2-221ENST00000555773 SLITRK5O94991 958 aa11.68□□□□□ -0.54
SHMT2-221ENST00000555773 IFNA16P05015 189 aa11.68□□□□□ -0.54
SHMT2-221ENST00000555773 ATP1B1P05026 303 aa11.68□□□□□ -0.54
SHMT2-221ENST00000555773 SNRPB2P08579 225 aaKnown RBP11.68□□□□□ -0.54
SHMT2-221ENST00000555773 FEN1P39748 380 aaKnown RBP11.68□□□□□ -0.54
SHMT2-221ENST00000555773 ZFP36L2P47974 494 aaKnown RBP11.68□□□□□ -0.54
SHMT2-221ENST00000555773 MANFP55145 182 aaKnown RBP11.68□□□□□ -0.54
SHMT2-221ENST00000555773 PLIN5Q00G26 463 aa11.68□□□□□ -0.54
SHMT2-221ENST00000555773 UBAP2LQ14157 1087 aaKnown RBP11.68□□□□□ -0.54
SHMT2-221ENST00000555773 RCAN2Q14206 197 aa11.68□□□□□ -0.54
SHMT2-221ENST00000555773 PRSS53Q2L4Q9 553 aa11.68□□□□□ -0.54
SHMT2-221ENST00000555773 ZNF385BQ569K4 471 aa11.68□□□□□ -0.54
SHMT2-221ENST00000555773 SPANXN4Q5MJ08 99 aa11.68□□□□□ -0.54
SHMT2-221ENST00000555773 FAM91A1Q658Y4 838 aa11.68□□□□□ -0.54
SHMT2-221ENST00000555773 OR4F3Q6IEY1 312 aa11.68□□□□□ -0.54
SHMT2-221ENST00000555773 ANKRD26P1Q6NSI1 321 aa11.68□□□□□ -0.54
SHMT2-221ENST00000555773 CPEB2Q7Z5Q1 589 aaKnown RBP11.68□□□□□ -0.54
SHMT2-221ENST00000555773 ANKRD37Q7Z713 158 aa11.68□□□□□ -0.54
SHMT2-221ENST00000555773 CCDC116Q8IYX3 515 aa11.68□□□□□ -0.54
SHMT2-221ENST00000555773 OR9I1Q8NGQ6 314 aa11.68□□□□□ -0.54
SHMT2-221ENST00000555773 RP9Q8TA86 221 aaKnown RBP11.68□□□□□ -0.54
SHMT2-221ENST00000555773 OR5P2Q8WZ92 322 aa11.68□□□□□ -0.54
SHMT2-221ENST00000555773 SPDL1Q96EA4 605 aa11.68□□□□□ -0.54
SHMT2-221ENST00000555773 SLC45A3Q96JT2 553 aa11.68□□□□□ -0.54
SHMT2-221ENST00000555773 DGAT2Q96PD7 388 aa11.68□□□□□ -0.54
SHMT2-221ENST00000555773 OR52E6Q96RD3 313 aa11.68□□□□□ -0.54
SHMT2-221ENST00000555773 SLC25A23Q9BV35 468 aa11.68□□□□□ -0.54
SHMT2-221ENST00000555773 RMND5AQ9H871 391 aa11.68□□□□□ -0.54
SHMT2-221ENST00000555773 SLC52A3Q9NQ40 469 aa11.68□□□□□ -0.54
SHMT2-221ENST00000555773 ARMCX1Q9P291 453 aa11.68□□□□□ -0.54
SHMT2-221ENST00000555773 IL17BQ9UHF5 180 aa11.68□□□□□ -0.54
SHMT2-221ENST00000555773 BTNL2Q9UIR0 455 aa11.68□□□□□ -0.54
SHMT2-221ENST00000555773 PCDHGB4Q9UN71 923 aa11.68□□□□□ -0.54
SHMT2-221ENST00000555773 SDK2Q58EX2 2172 aa11.67□□□□□ -0.54
SHMT2-221ENST00000555773 A0A1W2PP18 115 aa11.67□□□□□ -0.54
SHMT2-221ENST00000555773 A0A1W2PQ72 361 aa11.67□□□□□ -0.54
SHMT2-221ENST00000555773 CCDC154A6NI56 674 aa11.67□□□□□ -0.54
SHMT2-221ENST00000555773 TGFBR3LH3BV60 316 aa11.67□□□□□ -0.54
SHMT2-221ENST00000555773 TLX3O43711 291 aaPredicted RBP11.67□□□□□ -0.54
SHMT2-221ENST00000555773 SCN2BO60939 215 aa11.67□□□□□ -0.54
SHMT2-221ENST00000555773 CAPNS1P04632 268 aa11.67□□□□□ -0.54
SHMT2-221ENST00000555773 IFI6P09912 130 aa11.67□□□□□ -0.54
SHMT2-221ENST00000555773 LIFP15018 202 aa11.67□□□□□ -0.54
SHMT2-221ENST00000555773 TNNI3P19429 210 aa11.67□□□□□ -0.54
SHMT2-221ENST00000555773 PRDX6P30041 224 aa11.67□□□□□ -0.54
SHMT2-221ENST00000555773 NCBP2P52298 156 aaKnown RBP eCLIP11.67□□□□□ -0.54
SHMT2-221ENST00000555773 EFNA3P52797 238 aa11.67□□□□□ -0.54
SHMT2-221ENST00000555773 DGKQP52824 942 aa11.67□□□□□ -0.54
SHMT2-221ENST00000555773 WNT3P56703 355 aa11.67□□□□□ -0.54
SHMT2-221ENST00000555773 OR4D2P58180 307 aa11.67□□□□□ -0.54
SHMT2-221ENST00000555773 PHC1P78364 1004 aa11.67□□□□□ -0.54
SHMT2-221ENST00000555773 ID2Q02363 134 aa11.67□□□□□ -0.54
SHMT2-221ENST00000555773 MAP4K2Q12851 820 aa11.67□□□□□ -0.54
SHMT2-221ENST00000555773 STX5Q13190 355 aa11.67□□□□□ -0.54
SHMT2-221ENST00000555773 CYLC2Q14093 348 aaPredicted RBP11.67□□□□□ -0.54
SHMT2-221ENST00000555773 TERF2Q15554 542 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms