RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 NHLRC2Q8NBF2 726 aa2.67□□□□□ -1.98
SCFD1-216ENST00000555550 PRCCQ92733 491 aaPredicted RBP2.67□□□□□ -1.98
SCFD1-216ENST00000555550 NTNG2Q96CW9 530 aa2.67□□□□□ -1.98
SCFD1-216ENST00000555550 PARK7Q99497 189 aaKnown RBP2.67□□□□□ -1.98
SCFD1-216ENST00000555550 PAXXQ9BUH6 204 aa2.67□□□□□ -1.98
SCFD1-216ENST00000555550 WWP1Q9H0M0 922 aa2.67□□□□□ -1.98
SCFD1-216ENST00000555550 RNF41Q9H4P4 317 aaPredicted RBP2.67□□□□□ -1.98
SCFD1-216ENST00000555550 TMEM161AQ9NX61 479 aa2.67□□□□□ -1.98
SCFD1-216ENST00000555550 VNN3Q9NY84 501 aa2.67□□□□□ -1.98
SCFD1-216ENST00000555550 SENP1Q9P0U3 644 aa2.67□□□□□ -1.98
SCFD1-216ENST00000555550 VPS18Q9P253 973 aa2.67□□□□□ -1.98
SCFD1-216ENST00000555550 SEC14L4Q9UDX3 406 aa2.67□□□□□ -1.98
SCFD1-216ENST00000555550 ACEP12821 1306 aa2.67□□□□□ -1.98
SCFD1-216ENST00000555550 ATP6AP2A0A1C7CYW4 349 aa2.66□□□□□ -1.98
SCFD1-216ENST00000555550 GTPBP10A4D1E9 387 aaKnown RBP2.66□□□□□ -1.98
SCFD1-216ENST00000555550 EFCAB7A8K855 629 aa2.66□□□□□ -1.98
SCFD1-216ENST00000555550 CSDE1O75534 798 aaKnown RBP2.66□□□□□ -1.98
SCFD1-216ENST00000555550 SLU7O95391 586 aaKnown RBP2.66□□□□□ -1.98
SCFD1-216ENST00000555550 PRAMEF12O95522 483 aa2.66□□□□□ -1.98
SCFD1-216ENST00000555550 CCDC159P0C7I6 412 aa2.66□□□□□ -1.98
SCFD1-216ENST00000555550 GLRA1P23415 457 aa2.66□□□□□ -1.98
SCFD1-216ENST00000555550 CCR4P51679 360 aa2.66□□□□□ -1.98
SCFD1-216ENST00000555550 ERVPABLB-1P60509 514 aa2.66□□□□□ -1.98
SCFD1-216ENST00000555550 PAX2Q02962 417 aa2.66□□□□□ -1.98
SCFD1-216ENST00000555550 SLC10A1Q14973 349 aa2.66□□□□□ -1.98
SCFD1-216ENST00000555550 LRRC38Q5VT99 294 aa2.66□□□□□ -1.98
SCFD1-216ENST00000555550 AGAP6Q5VW22 663 aa2.66□□□□□ -1.98
SCFD1-216ENST00000555550 KHDRBS2Q5VWX1 349 aaKnown RBP2.66□□□□□ -1.98
SCFD1-216ENST00000555550 CYP4V2Q6ZWL3 525 aaPredicted RBP2.66□□□□□ -1.98
SCFD1-216ENST00000555550 OTOAQ7RTW8 1153 aa2.66□□□□□ -1.98
SCFD1-216ENST00000555550 C17orf64Q86WR6 236 aa2.66□□□□□ -1.98
SCFD1-216ENST00000555550 THEM5Q8N1Q8 247 aa2.66□□□□□ -1.98
SCFD1-216ENST00000555550 CORO2AQ92828 525 aa2.66□□□□□ -1.98
SCFD1-216ENST00000555550 ULK4Q96C45 1275 aa2.66□□□□□ -1.98
SCFD1-216ENST00000555550 NUS1Q96E22 293 aa2.66□□□□□ -1.98
SCFD1-216ENST00000555550 MAGEB18Q96M61 343 aa2.66□□□□□ -1.98
SCFD1-216ENST00000555550 ZNF559Q9BR84 538 aa2.66□□□□□ -1.98
SCFD1-216ENST00000555550 THUMPD3Q9BV44 507 aaKnown RBP2.66□□□□□ -1.98
SCFD1-216ENST00000555550 SRD5A3Q9H8P0 318 aa2.66□□□□□ -1.98
SCFD1-216ENST00000555550 TIGARQ9NQ88 270 aa2.66□□□□□ -1.98
SCFD1-216ENST00000555550 ZNF446Q9NWS9 450 aa2.66□□□□□ -1.98
SCFD1-216ENST00000555550 ARMCX3Q9UH62 379 aaPredicted RBP2.66□□□□□ -1.98
SCFD1-216ENST00000555550 ITM2BQ9Y287 266 aa2.66□□□□□ -1.98
SCFD1-216ENST00000555550 NTNG1Q9Y2I2 539 aa2.66□□□□□ -1.98
SCFD1-216ENST00000555550 TRABD2BA6NFA1 517 aa2.65□□□□□ -1.99
SCFD1-216ENST00000555550 K7ERI5 159 aa2.65□□□□□ -1.99
SCFD1-216ENST00000555550 SLC30A4O14863 429 aa2.65□□□□□ -1.99
SCFD1-216ENST00000555550 GPAA1O43292 621 aa2.65□□□□□ -1.99
SCFD1-216ENST00000555550 ATP9AO75110 1047 aa2.65□□□□□ -1.99
SCFD1-216ENST00000555550 CRCPO75575 148 aa2.65□□□□□ -1.99
SCFD1-216ENST00000555550 IFNAR1P17181 557 aa2.65□□□□□ -1.99
SCFD1-216ENST00000555550 TNFRSF4P43489 277 aa2.65□□□□□ -1.99
SCFD1-216ENST00000555550 NDST1P52848 882 aa2.65□□□□□ -1.99
SCFD1-216ENST00000555550 MFAP2P55001 183 aa2.65□□□□□ -1.99
SCFD1-216ENST00000555550 CXCL6P80162 114 aa2.65□□□□□ -1.99
SCFD1-216ENST00000555550 SLC34A1Q06495 639 aa2.65□□□□□ -1.99
SCFD1-216ENST00000555550 UNC50Q53HI1 259 aa2.65□□□□□ -1.99
SCFD1-216ENST00000555550 DDI2Q5TDH0 399 aa2.65□□□□□ -1.99
SCFD1-216ENST00000555550 Q6ZRG5 221 aa2.65□□□□□ -1.99
SCFD1-216ENST00000555550 MSANTD1Q6ZTZ1 278 aa2.65□□□□□ -1.99
SCFD1-216ENST00000555550 FBXW8Q8N3Y1 598 aa2.65□□□□□ -1.99
SCFD1-216ENST00000555550 CHDHQ8NE62 594 aaPredicted RBP2.65□□□□□ -1.99
SCFD1-216ENST00000555550 GOLGA5Q8TBA6 731 aa2.65□□□□□ -1.99
SCFD1-216ENST00000555550 RAB3CQ96E17 227 aa2.65□□□□□ -1.99
SCFD1-216ENST00000555550 CDKN2AIPNLQ96HQ2 116 aa2.65□□□□□ -1.99
SCFD1-216ENST00000555550 CCDC114Q96M63 670 aa2.65□□□□□ -1.99
SCFD1-216ENST00000555550 CITED2Q99967 270 aaPredicted RBP2.65□□□□□ -1.99
SCFD1-216ENST00000555550 EDEM3Q9BZQ6 932 aa2.65□□□□□ -1.99
SCFD1-216ENST00000555550 ERVK-19Q9WJR5 959 aa2.65□□□□□ -1.99
SCFD1-216ENST00000555550 MUC19Q7Z5P9 8384 aa2.64□□□□□ -1.99
SCFD1-216ENST00000555550 A0A087X0K7 114 aa2.64□□□□□ -1.99
SCFD1-216ENST00000555550 LYPD3O95274 346 aa2.64□□□□□ -1.99
SCFD1-216ENST00000555550 KRT6AP02538 564 aa2.64□□□□□ -1.99
SCFD1-216ENST00000555550 KRT6BP04259 564 aa2.64□□□□□ -1.99
SCFD1-216ENST00000555550 MMP10P09238 476 aa2.64□□□□□ -1.99
SCFD1-216ENST00000555550 C8orf89P0DMQ9 161 aa2.64□□□□□ -1.99
SCFD1-216ENST00000555550 CPA3P15088 417 aa2.64□□□□□ -1.99
SCFD1-216ENST00000555550 CD1EP15812 388 aa2.64□□□□□ -1.99
SCFD1-216ENST00000555550 CASTP20810 708 aaKnown RBP2.64□□□□□ -1.99
SCFD1-216ENST00000555550 OR1D2P34982 312 aa2.64□□□□□ -1.99
SCFD1-216ENST00000555550 MTIF2P46199 727 aaKnown RBP2.64□□□□□ -1.99
SCFD1-216ENST00000555550 KRT6CP48668 564 aa2.64□□□□□ -1.99
SCFD1-216ENST00000555550 ARHGDIAP52565 204 aa2.64□□□□□ -1.99
SCFD1-216ENST00000555550 SLC7A2P52569 658 aa2.64□□□□□ -1.99
SCFD1-216ENST00000555550 MFGE8Q08431 387 aaPredicted RBP2.64□□□□□ -1.99
SCFD1-216ENST00000555550 OVGP1Q12889 678 aa2.64□□□□□ -1.99
SCFD1-216ENST00000555550 LCP2Q13094 533 aa2.64□□□□□ -1.99
SCFD1-216ENST00000555550 KIAA0040Q15053 153 aa2.64□□□□□ -1.99
SCFD1-216ENST00000555550 P2RY14Q15391 338 aa2.64□□□□□ -1.99
SCFD1-216ENST00000555550 WSCD2Q2TBF2 565 aa2.64□□□□□ -1.99
SCFD1-216ENST00000555550 ACER2Q5QJU3 275 aa2.64□□□□□ -1.99
SCFD1-216ENST00000555550 MPP7Q5T2T1 576 aa2.64□□□□□ -1.99
SCFD1-216ENST00000555550 C1orf189Q5VU69 101 aa2.64□□□□□ -1.99
SCFD1-216ENST00000555550 FAM219BQ5XKK7 198 aa2.64□□□□□ -1.99
SCFD1-216ENST00000555550 WDR25Q64LD2 544 aaPredicted RBP2.64□□□□□ -1.99
SCFD1-216ENST00000555550 TATDN1Q6P1N9 297 aa2.64□□□□□ -1.99
SCFD1-216ENST00000555550 C2orf66Q6UXQ4 117 aa2.64□□□□□ -1.99
SCFD1-216ENST00000555550 FAM47EQ6ZV65 393 aa2.64□□□□□ -1.99
SCFD1-216ENST00000555550 WDR49Q8IV35 697 aa2.64□□□□□ -1.99
SCFD1-216ENST00000555550 UBQLNLQ8IYU4 475 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms