RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 ENPP4Q9Y6X5 453 aa16.22■□□□□ 0.19
PPP4R3A-208ENST00000555462 F5P12259 2224 aa16.22■□□□□ 0.19
PPP4R3A-208ENST00000555462 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.22■□□□□ 0.19
PPP4R3A-208ENST00000555462 ZNF197O14709 1029 aa16.22■□□□□ 0.19
PPP4R3A-208ENST00000555462 ERAL1O75616 437 aaKnown RBP16.22■□□□□ 0.19
PPP4R3A-208ENST00000555462 CATP04040 527 aaKnown RBP16.22■□□□□ 0.19
PPP4R3A-208ENST00000555462 OR12D1P0DN82 309 aa16.22■□□□□ 0.19
PPP4R3A-208ENST00000555462 TIE1P35590 1138 aa16.22■□□□□ 0.19
PPP4R3A-208ENST00000555462 XCR1P46094 333 aa16.22■□□□□ 0.19
PPP4R3A-208ENST00000555462 DSTNP60981 165 aa16.22■□□□□ 0.19
PPP4R3A-208ENST00000555462 ZNF791Q3KP31 576 aaPredicted RBP16.22■□□□□ 0.19
PPP4R3A-208ENST00000555462 SDE2Q6IQ49 451 aa16.22■□□□□ 0.19
PPP4R3A-208ENST00000555462 TRIM40Q6P9F5 258 aa16.22■□□□□ 0.19
PPP4R3A-208ENST00000555462 ZNF367Q7RTV3 350 aa16.22■□□□□ 0.19
PPP4R3A-208ENST00000555462 PHC2Q8IXK0 858 aa16.22■□□□□ 0.19
PPP4R3A-208ENST00000555462 GPR32P1Q8NGA4 272 aa16.22■□□□□ 0.19
PPP4R3A-208ENST00000555462 DNAJB8Q8NHS0 232 aa16.22■□□□□ 0.19
PPP4R3A-208ENST00000555462 GEMIN6Q8WXD5 167 aaKnown RBP16.22■□□□□ 0.19
PPP4R3A-208ENST00000555462 PHF21AQ96BD5 680 aa16.22■□□□□ 0.19
PPP4R3A-208ENST00000555462 REPS1Q96D71 796 aa16.22■□□□□ 0.19
PPP4R3A-208ENST00000555462 CWH43Q9H720 699 aa16.22■□□□□ 0.19
PPP4R3A-208ENST00000555462 GALNT9Q9HCQ5 603 aa16.22■□□□□ 0.19
PPP4R3A-208ENST00000555462 CCDC59Q9P031 241 aaKnown RBP16.22■□□□□ 0.19
PPP4R3A-208ENST00000555462 SEC14L3Q9UDX4 400 aa16.22■□□□□ 0.19
PPP4R3A-208ENST00000555462 A0A1W2PPK0 400 aa16.21■□□□□ 0.19
PPP4R3A-208ENST00000555462 A0A1W2PS29 197 aa16.21■□□□□ 0.19
PPP4R3A-208ENST00000555462 RECQLP46063 649 aaPredicted RBP16.21■□□□□ 0.19
PPP4R3A-208ENST00000555462 INPP1P49441 399 aa16.21■□□□□ 0.19
PPP4R3A-208ENST00000555462 TEAD4Q15561 434 aa16.21■□□□□ 0.19
PPP4R3A-208ENST00000555462 SMU1Q2TAY7 513 aa16.21■□□□□ 0.19
PPP4R3A-208ENST00000555462 CEP78Q5JTW2 689 aa16.21■□□□□ 0.19
PPP4R3A-208ENST00000555462 FAM209AQ5JX71 171 aa16.21■□□□□ 0.19
PPP4R3A-208ENST00000555462 UNC5DQ6UXZ4 953 aa16.21■□□□□ 0.19
PPP4R3A-208ENST00000555462 HCFC2Q9Y5Z7 792 aa16.21■□□□□ 0.19
PPP4R3A-208ENST00000555462 FAM183AA6NL82 134 aa16.21■□□□□ 0.19
PPP4R3A-208ENST00000555462 CAPN5O15484 640 aaPredicted RBP16.21■□□□□ 0.19
PPP4R3A-208ENST00000555462 CSTF2P33240 577 aaKnown RBP eCLIP16.21■□□□□ 0.19
PPP4R3A-208ENST00000555462 SCN1BQ07699 218 aa16.21■□□□□ 0.19
PPP4R3A-208ENST00000555462 RBBP4Q09028 425 aa16.21■□□□□ 0.19
PPP4R3A-208ENST00000555462 HYAL2Q12891 473 aa16.21■□□□□ 0.19
PPP4R3A-208ENST00000555462 TATDN3Q17R31 274 aa16.21■□□□□ 0.19
PPP4R3A-208ENST00000555462 FBXO43Q4G163 708 aa16.21■□□□□ 0.19
PPP4R3A-208ENST00000555462 ANXA8L1Q5VT79 327 aa16.21■□□□□ 0.19
PPP4R3A-208ENST00000555462 TCTN3Q6NUS6 607 aa16.21■□□□□ 0.19
PPP4R3A-208ENST00000555462 LRRTM4Q86VH4 590 aa16.21■□□□□ 0.19
PPP4R3A-208ENST00000555462 FAM9CQ8IZT9 166 aa16.21■□□□□ 0.19
PPP4R3A-208ENST00000555462 OR4F15Q8NGB8 312 aa16.21■□□□□ 0.19
PPP4R3A-208ENST00000555462 BBS10Q8TAM1 723 aa16.21■□□□□ 0.19
PPP4R3A-208ENST00000555462 TM9SF4Q92544 642 aa16.21■□□□□ 0.19
PPP4R3A-208ENST00000555462 TMEM80Q96HE8 168 aa16.21■□□□□ 0.19
PPP4R3A-208ENST00000555462 PLA2G12AQ9BZM1 189 aa16.21■□□□□ 0.19
PPP4R3A-208ENST00000555462 SRRQ9GZT4 340 aa16.21■□□□□ 0.19
PPP4R3A-208ENST00000555462 FTSJ1Q9UET6 329 aa16.21■□□□□ 0.19
PPP4R3A-208ENST00000555462 ABT1Q9ULW3 272 aaKnown RBP16.21■□□□□ 0.19
PPP4R3A-208ENST00000555462 CFAP54Q96N23 3096 aa16.21■□□□□ 0.19
PPP4R3A-208ENST00000555462 CEP290O15078 2479 aa16.21■□□□□ 0.18
PPP4R3A-208ENST00000555462 A0A0X1KG70 313 aa16.21■□□□□ 0.18
PPP4R3A-208ENST00000555462 ZC3H12DA2A288 527 aaKnown RBP16.21■□□□□ 0.18
PPP4R3A-208ENST00000555462 ZSCAN5BA6NJL1 495 aa16.21■□□□□ 0.18
PPP4R3A-208ENST00000555462 B4DXG7 233 aa16.21■□□□□ 0.18
PPP4R3A-208ENST00000555462 TMEM115Q12893 351 aaPredicted RBP16.21■□□□□ 0.18
PPP4R3A-208ENST00000555462 BTBD16Q32M84 506 aa16.21■□□□□ 0.18
PPP4R3A-208ENST00000555462 ZNF697Q5TEC3 545 aa16.21■□□□□ 0.18
PPP4R3A-208ENST00000555462 TUBA3EQ6PEY2 450 aa16.21■□□□□ 0.18
PPP4R3A-208ENST00000555462 DDX53Q86TM3 631 aaKnown RBP16.21■□□□□ 0.18
PPP4R3A-208ENST00000555462 NOXA1Q86UR1 476 aa16.21■□□□□ 0.18
PPP4R3A-208ENST00000555462 AP2M1Q96CW1 435 aa16.21■□□□□ 0.18
PPP4R3A-208ENST00000555462 TMCO6Q96DC7 493 aa16.21■□□□□ 0.18
PPP4R3A-208ENST00000555462 TRMT61BQ9BVS5 477 aaKnown RBP16.21■□□□□ 0.18
PPP4R3A-208ENST00000555462 MRPS7Q9Y2R9 242 aaKnown RBP16.21■□□□□ 0.18
PPP4R3A-208ENST00000555462 C12orf71A8MTZ7 269 aa16.2■□□□□ 0.18
PPP4R3A-208ENST00000555462 CELP19835 753 aa16.2■□□□□ 0.18
PPP4R3A-208ENST00000555462 PSMA3P25788 255 aa16.2■□□□□ 0.18
PPP4R3A-208ENST00000555462 PSPHP78330 225 aa16.2■□□□□ 0.18
PPP4R3A-208ENST00000555462 TIMM50Q3ZCQ8 353 aa16.2■□□□□ 0.18
PPP4R3A-208ENST00000555462 GPAT3Q53EU6 434 aa16.2■□□□□ 0.18
PPP4R3A-208ENST00000555462 LIPJQ5W064 366 aa16.2■□□□□ 0.18
PPP4R3A-208ENST00000555462 CHTF18Q8WVB6 975 aa16.2■□□□□ 0.18
PPP4R3A-208ENST00000555462 SLC7A6Q92536 515 aa16.2■□□□□ 0.18
PPP4R3A-208ENST00000555462 NLNQ9BYT8 704 aa16.2■□□□□ 0.18
PPP4R3A-208ENST00000555462 LSM7Q9UK45 103 aaKnown RBP16.2■□□□□ 0.18
PPP4R3A-208ENST00000555462 MAU2Q9Y6X3 613 aa16.2■□□□□ 0.18
PPP4R3A-208ENST00000555462 TRAV6A0A075B6T7 132 aa16.2■□□□□ 0.18
PPP4R3A-208ENST00000555462 PIPSLA2A3N6 862 aa16.2■□□□□ 0.18
PPP4R3A-208ENST00000555462 ZAR1LA6NP61 321 aa16.2■□□□□ 0.18
PPP4R3A-208ENST00000555462 FURINP09958 794 aa16.2■□□□□ 0.18
PPP4R3A-208ENST00000555462 MSL3P1P0C860 447 aa16.2■□□□□ 0.18
PPP4R3A-208ENST00000555462 NPPBP16860 134 aa16.2■□□□□ 0.18
PPP4R3A-208ENST00000555462 CAMK2BQ13554 666 aa16.2■□□□□ 0.18
PPP4R3A-208ENST00000555462 HEPACAMQ14CZ8 416 aa16.2■□□□□ 0.18
PPP4R3A-208ENST00000555462 CCSAPQ6IQ19 270 aaPredicted RBP16.2■□□□□ 0.18
PPP4R3A-208ENST00000555462 PLET1Q6UQ28 207 aa16.2■□□□□ 0.18
PPP4R3A-208ENST00000555462 PCSK9Q8NBP7 692 aaKnown RBP16.2■□□□□ 0.18
PPP4R3A-208ENST00000555462 OR52N2Q8NGI0 321 aa16.2■□□□□ 0.18
PPP4R3A-208ENST00000555462 NXF2Q9GZY0 626 aaKnown RBP16.2■□□□□ 0.18
PPP4R3A-208ENST00000555462 PLCXD1Q9NUJ7 323 aa16.2■□□□□ 0.18
PPP4R3A-208ENST00000555462 MCUBQ9NWR8 336 aa16.2■□□□□ 0.18
PPP4R3A-208ENST00000555462 MAT2BQ9NZL9 334 aa16.2■□□□□ 0.18
PPP4R3A-208ENST00000555462 TAAR2Q9P1P5 351 aa16.2■□□□□ 0.18
PPP4R3A-208ENST00000555462 KLK4Q9Y5K2 254 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms