RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 NAA20P61599 178 aa10.97□□□□□ -0.65
VRK1-204ENST00000555351 PIGGQ5H8A4 983 aa10.97□□□□□ -0.65
VRK1-204ENST00000555351 RNFT1Q5M7Z0 435 aa10.97□□□□□ -0.65
VRK1-204ENST00000555351 NDUFAF5Q5TEU4 345 aa10.97□□□□□ -0.65
VRK1-204ENST00000555351 C18orf63Q68DL7 685 aa10.97□□□□□ -0.65
VRK1-204ENST00000555351 TTC19Q6DKK2 380 aaPredicted RBP10.97□□□□□ -0.65
VRK1-204ENST00000555351 PAOXQ6QHF9 649 aa10.97□□□□□ -0.65
VRK1-204ENST00000555351 GK5Q6ZS86 529 aa10.97□□□□□ -0.65
VRK1-204ENST00000555351 SLC22A9Q8IVM8 553 aa10.97□□□□□ -0.65
VRK1-204ENST00000555351 CHERPQ8IWX8 916 aaKnown RBP10.97□□□□□ -0.65
VRK1-204ENST00000555351 METTL4Q8N3J2 472 aa10.97□□□□□ -0.65
VRK1-204ENST00000555351 OR4F6Q8NGB9 312 aa10.97□□□□□ -0.65
VRK1-204ENST00000555351 SLC22A8Q8TCC7 542 aa10.97□□□□□ -0.65
VRK1-204ENST00000555351 CDK15Q96Q40 435 aa10.97□□□□□ -0.65
VRK1-204ENST00000555351 ELOVL6Q9H5J4 265 aa10.97□□□□□ -0.65
VRK1-204ENST00000555351 PSMC3IPQ9P2W1 217 aaPredicted RBP10.97□□□□□ -0.65
VRK1-204ENST00000555351 SVILO95425 2214 aa10.97□□□□□ -0.65
VRK1-204ENST00000555351 CROCCQ5TZA2 2017 aa10.96□□□□□ -0.65
VRK1-204ENST00000555351 E9PLN8 166 aa10.96□□□□□ -0.65
VRK1-204ENST00000555351 WWP2O00308 870 aa10.96□□□□□ -0.65
VRK1-204ENST00000555351 PRRG2O14669 202 aa10.96□□□□□ -0.65
VRK1-204ENST00000555351 WISP2O76076 250 aa10.96□□□□□ -0.65
VRK1-204ENST00000555351 AIFM1O95831 613 aa10.96□□□□□ -0.65
VRK1-204ENST00000555351 ESRRAP11474 423 aaPredicted RBP10.96□□□□□ -0.65
VRK1-204ENST00000555351 ABOP16442 354 aa10.96□□□□□ -0.65
VRK1-204ENST00000555351 IMPDH1P20839 514 aa10.96□□□□□ -0.65
VRK1-204ENST00000555351 CNR1P21554 472 aa10.96□□□□□ -0.65
VRK1-204ENST00000555351 ATP5F1P24539 256 aaPredicted RBP10.96□□□□□ -0.65
VRK1-204ENST00000555351 HSD17B3P37058 310 aa10.96□□□□□ -0.65
VRK1-204ENST00000555351 ST13P50502 369 aaKnown RBP10.96□□□□□ -0.65
VRK1-204ENST00000555351 TRA2BP62995 288 aaKnown RBP10.96□□□□□ -0.65
VRK1-204ENST00000555351 ID2Q02363 134 aa10.96□□□□□ -0.65
VRK1-204ENST00000555351 CLCQ05315 142 aa10.96□□□□□ -0.65
VRK1-204ENST00000555351 SLC29A2Q14542 456 aa10.96□□□□□ -0.65
VRK1-204ENST00000555351 RASA2Q15283 850 aa10.96□□□□□ -0.65
VRK1-204ENST00000555351 C3AR1Q16581 482 aa10.96□□□□□ -0.65
VRK1-204ENST00000555351 HYAL4Q2M3T9 481 aa10.96□□□□□ -0.65
VRK1-204ENST00000555351 ZNF678Q5SXM1 525 aa10.96□□□□□ -0.65
VRK1-204ENST00000555351 IL20RBQ6UXL0 311 aa10.96□□□□□ -0.65
VRK1-204ENST00000555351 SLC29A4Q7RTT9 530 aa10.96□□□□□ -0.65
VRK1-204ENST00000555351 MRGPRGQ86SM5 289 aa10.96□□□□□ -0.65
VRK1-204ENST00000555351 SLC22A16Q86VW1 577 aa10.96□□□□□ -0.65
VRK1-204ENST00000555351 OR4N5Q8IXE1 308 aa10.96□□□□□ -0.65
VRK1-204ENST00000555351 ZNF321PQ8N8H1 164 aa10.96□□□□□ -0.65
VRK1-204ENST00000555351 OR2M7Q8NG81 312 aa10.96□□□□□ -0.65
VRK1-204ENST00000555351 UHMK1Q8TAS1 419 aaKnown RBP10.96□□□□□ -0.65
VRK1-204ENST00000555351 RIT1Q92963 219 aa10.96□□□□□ -0.65
VRK1-204ENST00000555351 TP53INP1Q96A56 240 aa10.96□□□□□ -0.65
VRK1-204ENST00000555351 CCDC126Q96EE4 140 aa10.96□□□□□ -0.65
VRK1-204ENST00000555351 L3HYPDHQ96EM0 354 aa10.96□□□□□ -0.65
VRK1-204ENST00000555351 NSUN5Q96P11 429 aaKnown RBP10.96□□□□□ -0.65
VRK1-204ENST00000555351 ZNF382Q96SR6 550 aa10.96□□□□□ -0.65
VRK1-204ENST00000555351 VKORC1Q9BQB6 163 aa10.96□□□□□ -0.65
VRK1-204ENST00000555351 FAM173AQ9BQD7 235 aa10.96□□□□□ -0.65
VRK1-204ENST00000555351 RUBCNLQ9H714 662 aa10.96□□□□□ -0.65
VRK1-204ENST00000555351 ZDHHC11Q9H8X9 412 aa10.96□□□□□ -0.65
VRK1-204ENST00000555351 CHST11Q9NPF2 352 aa10.96□□□□□ -0.65
VRK1-204ENST00000555351 SEMA4BQ9NPR2 832 aaPredicted RBP10.96□□□□□ -0.65
VRK1-204ENST00000555351 DCDC2Q9UHG0 476 aa10.96□□□□□ -0.65
VRK1-204ENST00000555351 MEMO1Q9Y316 297 aa10.96□□□□□ -0.65
VRK1-204ENST00000555351 ARHGAP10A1A4S6 786 aa10.95□□□□□ -0.66
VRK1-204ENST00000555351 C1orf226A1L170 272 aa10.95□□□□□ -0.66
VRK1-204ENST00000555351 CCDC151A5D8V7 595 aa10.95□□□□□ -0.66
VRK1-204ENST00000555351 H3BQF6 201 aa10.95□□□□□ -0.66
VRK1-204ENST00000555351 ACOT7O00154 380 aa10.95□□□□□ -0.66
VRK1-204ENST00000555351 HNRNPRO43390 633 aaKnown RBP10.95□□□□□ -0.66
VRK1-204ENST00000555351 OR10H2O60403 315 aa10.95□□□□□ -0.66
VRK1-204ENST00000555351 GLSO94925 669 aaPredicted RBP10.95□□□□□ -0.66
VRK1-204ENST00000555351 KRT6AP02538 564 aa10.95□□□□□ -0.66
VRK1-204ENST00000555351 KRT6BP04259 564 aa10.95□□□□□ -0.66
VRK1-204ENST00000555351 FAM153BP0C7A2 387 aa10.95□□□□□ -0.66
VRK1-204ENST00000555351 RHOXF2BP0C7M4 288 aa10.95□□□□□ -0.66
VRK1-204ENST00000555351 PIK3R1P27986 724 aa10.95□□□□□ -0.66
VRK1-204ENST00000555351 TNFRSF8P28908 595 aa10.95□□□□□ -0.66
VRK1-204ENST00000555351 PTGS2P35354 604 aa10.95□□□□□ -0.66
VRK1-204ENST00000555351 KRT6CP48668 564 aa10.95□□□□□ -0.66
VRK1-204ENST00000555351 PRKAA2P54646 552 aa10.95□□□□□ -0.66
VRK1-204ENST00000555351 PKNOX1P55347 436 aa10.95□□□□□ -0.66
VRK1-204ENST00000555351 SLC37A1P57057 533 aa10.95□□□□□ -0.66
VRK1-204ENST00000555351 CSTF3Q12996 717 aaKnown RBP10.95□□□□□ -0.66
VRK1-204ENST00000555351 ZNF791Q3KP31 576 aaPredicted RBP10.95□□□□□ -0.66
VRK1-204ENST00000555351 FAM153CQ494X1 144 aa10.95□□□□□ -0.66
VRK1-204ENST00000555351 CMPK2Q5EBM0 449 aa10.95□□□□□ -0.66
VRK1-204ENST00000555351 LETMD1Q6P1Q0 360 aa10.95□□□□□ -0.66
VRK1-204ENST00000555351 ARHGAP11AQ6P4F7 1023 aa10.95□□□□□ -0.66
VRK1-204ENST00000555351 RNF111Q6ZNA4 994 aa10.95□□□□□ -0.66
VRK1-204ENST00000555351 TDRPQ86YL5 185 aa10.95□□□□□ -0.66
VRK1-204ENST00000555351 C9orf40Q8IXQ3 194 aa10.95□□□□□ -0.66
VRK1-204ENST00000555351 GBP7Q8N8V2 638 aaPredicted RBP10.95□□□□□ -0.66
VRK1-204ENST00000555351 C17orf47Q8NEP4 570 aa10.95□□□□□ -0.66
VRK1-204ENST00000555351 OR4K14Q8NGD5 310 aa10.95□□□□□ -0.66
VRK1-204ENST00000555351 MZB1Q8WU39 189 aa10.95□□□□□ -0.66
VRK1-204ENST00000555351 RHOXF2Q9BQY4 288 aa10.95□□□□□ -0.66
VRK1-204ENST00000555351 MRPL1Q9BYD6 325 aaKnown RBP10.95□□□□□ -0.66
VRK1-204ENST00000555351 SHCBP1LQ9BZQ2 653 aa10.95□□□□□ -0.66
VRK1-204ENST00000555351 TSPAN10Q9H1Z9 355 aaPredicted RBP10.95□□□□□ -0.66
VRK1-204ENST00000555351 EPB41L4BQ9H329 900 aa10.95□□□□□ -0.66
VRK1-204ENST00000555351 L2HGDHQ9H9P8 463 aa10.95□□□□□ -0.66
VRK1-204ENST00000555351 CXorf21Q9HAI6 301 aa10.95□□□□□ -0.66
VRK1-204ENST00000555351 SH2D2AQ9NP31 389 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms