RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 KRT4P19013 534 aa8.1□□□□□ -1.11
ACTN1-213ENST00000554508 GALNSP34059 522 aa8.1□□□□□ -1.11
ACTN1-213ENST00000554508 MEOX1P50221 254 aa8.1□□□□□ -1.11
ACTN1-213ENST00000554508 NEK2P51955 445 aa8.1□□□□□ -1.11
ACTN1-213ENST00000554508 HK2P52789 917 aa8.1□□□□□ -1.11
ACTN1-213ENST00000554508 PLIN5Q00G26 463 aa8.1□□□□□ -1.11
ACTN1-213ENST00000554508 FOLH1Q04609 750 aa8.1□□□□□ -1.11
ACTN1-213ENST00000554508 SRSF11Q05519 484 aaKnown RBP8.1□□□□□ -1.11
ACTN1-213ENST00000554508 TRAF3Q13114 568 aa8.1□□□□□ -1.11
ACTN1-213ENST00000554508 CASP8Q14790 479 aa8.1□□□□□ -1.11
ACTN1-213ENST00000554508 MPEG1Q2M385 716 aa8.1□□□□□ -1.11
ACTN1-213ENST00000554508 C18orf63Q68DL7 685 aa8.1□□□□□ -1.11
ACTN1-213ENST00000554508 OPN5Q6U736 354 aa8.1□□□□□ -1.11
ACTN1-213ENST00000554508 IL20RBQ6UXL0 311 aa8.1□□□□□ -1.11
ACTN1-213ENST00000554508 LRIG3Q6UXM1 1119 aa8.1□□□□□ -1.11
ACTN1-213ENST00000554508 Q6ZPB1 254 aaPredicted RBP8.1□□□□□ -1.11
ACTN1-213ENST00000554508 PAGE2Q7Z2X7 111 aa8.1□□□□□ -1.11
ACTN1-213ENST00000554508 CROCCP2Q86T23 111 aa8.1□□□□□ -1.11
ACTN1-213ENST00000554508 SPPL2CQ8IUH8 684 aa8.1□□□□□ -1.11
ACTN1-213ENST00000554508 SIAH3Q8IW03 269 aa8.1□□□□□ -1.11
ACTN1-213ENST00000554508 SULF2Q8IWU5 870 aa8.1□□□□□ -1.11
ACTN1-213ENST00000554508 OR4N5Q8IXE1 308 aa8.1□□□□□ -1.11
ACTN1-213ENST00000554508 ST13P4Q8IZP2 240 aaPredicted RBP8.1□□□□□ -1.11
ACTN1-213ENST00000554508 SLC34A3Q8N130 599 aa8.1□□□□□ -1.11
ACTN1-213ENST00000554508 GHDCQ8N2G8 530 aa8.1□□□□□ -1.11
ACTN1-213ENST00000554508 CPSF7Q8N684 471 aaKnown RBP8.1□□□□□ -1.11
ACTN1-213ENST00000554508 OR4F6Q8NGB9 312 aa8.1□□□□□ -1.11
ACTN1-213ENST00000554508 OR52B6Q8NGF0 335 aa8.1□□□□□ -1.11
ACTN1-213ENST00000554508 C16orf52Q8NHV5 167 aa8.1□□□□□ -1.11
ACTN1-213ENST00000554508 ACMSDQ8TDX5 336 aa8.1□□□□□ -1.11
ACTN1-213ENST00000554508 ZNF721Q8TF20 911 aa8.1□□□□□ -1.11
ACTN1-213ENST00000554508 ZNF483Q8TF39 744 aaPredicted RBP8.1□□□□□ -1.11
ACTN1-213ENST00000554508 MZB1Q8WU39 189 aa8.1□□□□□ -1.11
ACTN1-213ENST00000554508 ASB15Q8WXK1 588 aa8.1□□□□□ -1.11
ACTN1-213ENST00000554508 SENP5Q96HI0 755 aaPredicted RBP8.1□□□□□ -1.11
ACTN1-213ENST00000554508 CDK15Q96Q40 435 aa8.1□□□□□ -1.11
ACTN1-213ENST00000554508 RASL10BQ96S79 203 aa8.1□□□□□ -1.11
ACTN1-213ENST00000554508 TMEM109Q9BVC6 243 aa8.1□□□□□ -1.11
ACTN1-213ENST00000554508 ELOVL6Q9H5J4 265 aa8.1□□□□□ -1.11
ACTN1-213ENST00000554508 BRF2Q9HAW0 419 aa8.1□□□□□ -1.11
ACTN1-213ENST00000554508 SEMA4BQ9NPR2 832 aaPredicted RBP8.1□□□□□ -1.11
ACTN1-213ENST00000554508 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.1□□□□□ -1.111e-7■□□□□ 10.1
ACTN1-213ENST00000554508 NMRK1Q9NWW6 199 aa8.1□□□□□ -1.11
ACTN1-213ENST00000554508 LGALS13Q9UHV8 139 aa8.1□□□□□ -1.11
ACTN1-213ENST00000554508 NPIPA1Q9UND3 350 aa8.1□□□□□ -1.11
ACTN1-213ENST00000554508 CACNA1CQ13936 2221 aa8.09□□□□□ -1.11
ACTN1-213ENST00000554508 PHF3Q92576 2039 aaKnown RBP8.09□□□□□ -1.11
ACTN1-213ENST00000554508 A0A1W2PR48 441 aa8.09□□□□□ -1.11
ACTN1-213ENST00000554508 GOLGA6L10A6NI86 522 aa8.09□□□□□ -1.11
ACTN1-213ENST00000554508 WWP2O00308 870 aa8.09□□□□□ -1.11
ACTN1-213ENST00000554508 COPEO14579 308 aa8.09□□□□□ -1.11
ACTN1-213ENST00000554508 TMPRSS11DO60235 418 aa8.09□□□□□ -1.11
ACTN1-213ENST00000554508 ZG16O60844 167 aa8.09□□□□□ -1.11
ACTN1-213ENST00000554508 GUCY1B2O75343 617 aa8.09□□□□□ -1.11
ACTN1-213ENST00000554508 EEDO75530 441 aaKnown RBP8.09□□□□□ -1.11
ACTN1-213ENST00000554508 IGKV3-11P04433 115 aa8.09□□□□□ -1.11
ACTN1-213ENST00000554508 GSTA1P08263 222 aa8.09□□□□□ -1.11
ACTN1-213ENST00000554508 NR2F6P10588 404 aa8.09□□□□□ -1.11
ACTN1-213ENST00000554508 H2AFXP16104 143 aaPredicted RBP8.09□□□□□ -1.11
ACTN1-213ENST00000554508 IMPDH1P20839 514 aa8.09□□□□□ -1.11
ACTN1-213ENST00000554508 SOX3P41225 446 aa8.09□□□□□ -1.11
ACTN1-213ENST00000554508 CCT5P48643 541 aa8.09□□□□□ -1.11
ACTN1-213ENST00000554508 HERVK_113P63132 956 aa8.09□□□□□ -1.11
ACTN1-213ENST00000554508 ID2Q02363 134 aa8.09□□□□□ -1.11
ACTN1-213ENST00000554508 CLCQ05315 142 aa8.09□□□□□ -1.11
ACTN1-213ENST00000554508 SPRED3Q2MJR0 410 aa8.09□□□□□ -1.11
ACTN1-213ENST00000554508 PIGGQ5H8A4 983 aa8.09□□□□□ -1.11
ACTN1-213ENST00000554508 OR52E8Q6IFG1 317 aa8.09□□□□□ -1.11
ACTN1-213ENST00000554508 RPTNQ6XPR3 784 aa8.09□□□□□ -1.11
ACTN1-213ENST00000554508 RTL4Q6ZR62 310 aa8.09□□□□□ -1.11
ACTN1-213ENST00000554508 HDXQ7Z353 690 aa8.09□□□□□ -1.11
ACTN1-213ENST00000554508 MDGA2Q7Z553 956 aa8.09□□□□□ -1.11
ACTN1-213ENST00000554508 SLC22A9Q8IVM8 553 aa8.09□□□□□ -1.11
ACTN1-213ENST00000554508 SRRM1Q8IYB3 904 aaKnown RBP8.09□□□□□ -1.11
ACTN1-213ENST00000554508 C4orf33Q8N1A6 199 aa8.09□□□□□ -1.11
ACTN1-213ENST00000554508 METTL4Q8N3J2 472 aa8.09□□□□□ -1.11
ACTN1-213ENST00000554508 SLC15A4Q8N697 577 aa8.09□□□□□ -1.11
ACTN1-213ENST00000554508 ZNF321PQ8N8H1 164 aa8.09□□□□□ -1.11
ACTN1-213ENST00000554508 ZFP62Q8NB50 900 aaPredicted RBP8.09□□□□□ -1.11
ACTN1-213ENST00000554508 GOLM1Q8NBJ4 401 aa8.09□□□□□ -1.11
ACTN1-213ENST00000554508 PSD4Q8NDX1 1056 aa8.09□□□□□ -1.11
ACTN1-213ENST00000554508 NUBPLQ8TB37 319 aa8.09□□□□□ -1.11
ACTN1-213ENST00000554508 TRPC4APQ8TEL6 797 aa8.09□□□□□ -1.11
ACTN1-213ENST00000554508 PPWD1Q96BP3 646 aaKnown RBP8.09□□□□□ -1.11
ACTN1-213ENST00000554508 FBXL20Q96IG2 436 aa8.09□□□□□ -1.11
ACTN1-213ENST00000554508 MAGED4Q96JG8 741 aa8.09□□□□□ -1.11
ACTN1-213ENST00000554508 SGCZQ96LD1 299 aa8.09□□□□□ -1.11
ACTN1-213ENST00000554508 NSUN5Q96P11 429 aaKnown RBP8.09□□□□□ -1.11
ACTN1-213ENST00000554508 ERVK-6Q9BXR3 956 aa8.09□□□□□ -1.11
ACTN1-213ENST00000554508 TSPAN10Q9H1Z9 355 aaPredicted RBP8.09□□□□□ -1.11
ACTN1-213ENST00000554508 LIN28AQ9H9Z2 209 aaKnown RBP8.09□□□□□ -1.11
ACTN1-213ENST00000554508 TMEM216Q9P0N5 145 aa8.09□□□□□ -1.11
ACTN1-213ENST00000554508 TRPS1Q9UHF7 1281 aa8.09□□□□□ -1.11
ACTN1-213ENST00000554508 DCDC2Q9UHG0 476 aa8.09□□□□□ -1.11
ACTN1-213ENST00000554508 SNX6Q9UNH7 406 aa8.09□□□□□ -1.11
ACTN1-213ENST00000554508 ARHGAP10A1A4S6 786 aa8.08□□□□□ -1.12
ACTN1-213ENST00000554508 OR6C76A6NM76 312 aa8.08□□□□□ -1.12
ACTN1-213ENST00000554508 PRRG2O14669 202 aa8.08□□□□□ -1.12
ACTN1-213ENST00000554508 TFECO14948 347 aaPredicted RBP8.08□□□□□ -1.12
ACTN1-213ENST00000554508 OR10H2O60403 315 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms