RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 WDR12Q9GZL7 423 aaKnown RBP11.09□□□□□ -0.63
SHMT2-212ENST00000554467 RHBGQ9H310 441 aa11.09□□□□□ -0.63
SHMT2-212ENST00000554467 CD320Q9NPF0 282 aa11.09□□□□□ -0.63
SHMT2-212ENST00000554467 PRR19A6NJB7 356 aa11.09□□□□□ -0.63
SHMT2-212ENST00000554467 ERI3O43414 337 aaKnown RBP11.09□□□□□ -0.63
SHMT2-212ENST00000554467 GPR37L1O60883 481 aa11.09□□□□□ -0.63
SHMT2-212ENST00000554467 GCM2O75603 506 aaPredicted RBP11.09□□□□□ -0.63
SHMT2-212ENST00000554467 SEMA4FO95754 770 aa11.09□□□□□ -0.63
SHMT2-212ENST00000554467 AGXTP21549 392 aa11.09□□□□□ -0.63
SHMT2-212ENST00000554467 PRIM2P49643 509 aa11.09□□□□□ -0.63
SHMT2-212ENST00000554467 C1orf61Q13536 156 aa11.09□□□□□ -0.63
SHMT2-212ENST00000554467 PDE7AQ13946 482 aa11.09□□□□□ -0.63
SHMT2-212ENST00000554467 DGCR6Q14129 220 aa11.09□□□□□ -0.63
SHMT2-212ENST00000554467 ALG11Q2TAA5 492 aa11.09□□□□□ -0.63
SHMT2-212ENST00000554467 CPZQ66K79 652 aa11.09□□□□□ -0.63
SHMT2-212ENST00000554467 OLIG3Q7RTU3 272 aa11.09□□□□□ -0.63
SHMT2-212ENST00000554467 R3HCC1LQ7Z5L2 792 aaKnown RBP11.09□□□□□ -0.63
SHMT2-212ENST00000554467 CAMKMTQ7Z624 323 aa11.09□□□□□ -0.63
SHMT2-212ENST00000554467 HMGN2P46Q86SG4 172 aa11.09□□□□□ -0.63
SHMT2-212ENST00000554467 OR2L8Q8NGY9 312 aa11.09□□□□□ -0.63
SHMT2-212ENST00000554467 NDNFQ8TB73 568 aa11.09□□□□□ -0.63
SHMT2-212ENST00000554467 CHST8Q9H2A9 424 aa11.09□□□□□ -0.63
SHMT2-212ENST00000554467 ZNF451Q9Y4E5 1061 aa11.09□□□□□ -0.63
SHMT2-212ENST00000554467 CAPN5O15484 640 aaPredicted RBP11.09□□□□□ -0.63
SHMT2-212ENST00000554467 PRSS23O95084 383 aa11.09□□□□□ -0.63
SHMT2-212ENST00000554467 ATXN8OSP0DMR3 200 aa11.09□□□□□ -0.63
SHMT2-212ENST00000554467 TEAD1P28347 426 aa11.09□□□□□ -0.63
SHMT2-212ENST00000554467 HSD17B2P37059 387 aa11.09□□□□□ -0.63
SHMT2-212ENST00000554467 DCTP40126 519 aa11.09□□□□□ -0.63
SHMT2-212ENST00000554467 SLC19A1P41440 591 aa11.09□□□□□ -0.63
SHMT2-212ENST00000554467 MANFP55145 182 aaKnown RBP11.09□□□□□ -0.63
SHMT2-212ENST00000554467 CHRNEQ04844 493 aa11.09□□□□□ -0.63
SHMT2-212ENST00000554467 USP30Q70CQ3 517 aa11.09□□□□□ -0.63
SHMT2-212ENST00000554467 LSRQ86X29 649 aaPredicted RBP11.09□□□□□ -0.63
SHMT2-212ENST00000554467 SLC22A18ASQ8N1D0 253 aa11.09□□□□□ -0.63
SHMT2-212ENST00000554467 RAB8BQ92930 207 aa11.09□□□□□ -0.63
SHMT2-212ENST00000554467 TOE1Q96GM8 510 aaKnown RBP11.09□□□□□ -0.63
SHMT2-212ENST00000554467 GPR174Q9BXC1 333 aa11.09□□□□□ -0.63
SHMT2-212ENST00000554467 PCBD2Q9H0N5 130 aa11.09□□□□□ -0.63
SHMT2-212ENST00000554467 C8orf33Q9H7E9 229 aaPredicted RBP11.09□□□□□ -0.63
SHMT2-212ENST00000554467 TAS2R9Q9NYW1 312 aa11.09□□□□□ -0.63
SHMT2-212ENST00000554467 ZNF639Q9UID6 485 aa11.09□□□□□ -0.63
SHMT2-212ENST00000554467 KLF15Q9UIH9 416 aa11.09□□□□□ -0.63
SHMT2-212ENST00000554467 FBXW2Q9UKT8 454 aa11.09□□□□□ -0.63
SHMT2-212ENST00000554467 MMP17Q9ULZ9 603 aa11.09□□□□□ -0.63
SHMT2-212ENST00000554467 ABCA7Q8IZY2 2146 aa11.09□□□□□ -0.63
SHMT2-212ENST00000554467 SH3BP5O60239 455 aa11.08□□□□□ -0.64
SHMT2-212ENST00000554467 C8orf89P0DMQ9 161 aa11.08□□□□□ -0.64
SHMT2-212ENST00000554467 ALDH3A2P51648 485 aa11.08□□□□□ -0.64
SHMT2-212ENST00000554467 SRP54P61011 504 aaKnown RBP11.08□□□□□ -0.64
SHMT2-212ENST00000554467 TUBA3CQ13748 450 aa11.08□□□□□ -0.64
SHMT2-212ENST00000554467 SIM2Q14190 667 aaPredicted RBP11.08□□□□□ -0.64
SHMT2-212ENST00000554467 PRRT3Q5FWE3 981 aa11.08□□□□□ -0.64
SHMT2-212ENST00000554467 EOGTQ5NDL2 527 aa11.08□□□□□ -0.64
SHMT2-212ENST00000554467 TMEM236Q5W0B7 351 aa11.08□□□□□ -0.64
SHMT2-212ENST00000554467 AMIGO1Q86WK6 493 aa11.08□□□□□ -0.64
SHMT2-212ENST00000554467 DCP2Q8IU60 420 aaKnown RBP11.08□□□□□ -0.64
SHMT2-212ENST00000554467 C8orf59Q8N0T1 100 aaPredicted RBP11.08□□□□□ -0.64
SHMT2-212ENST00000554467 SDR16C5Q8N3Y7 309 aa11.08□□□□□ -0.64
SHMT2-212ENST00000554467 CREB3L4Q8TEY5 395 aa11.08□□□□□ -0.64
SHMT2-212ENST00000554467 CXorf40BQ96DE9 158 aa11.08□□□□□ -0.64
SHMT2-212ENST00000554467 AHSPQ9NZD4 102 aa11.08□□□□□ -0.64
SHMT2-212ENST00000554467 ZNF282Q9UDV7 671 aaPredicted RBP11.08□□□□□ -0.64
SHMT2-212ENST00000554467 LRIT2A6NDA9 550 aa11.08□□□□□ -0.64
SHMT2-212ENST00000554467 LRRC72A6NJI9 287 aa11.08□□□□□ -0.64
SHMT2-212ENST00000554467 IL5RAQ01344 420 aa11.08□□□□□ -0.64
SHMT2-212ENST00000554467 CDC20Q12834 499 aa11.08□□□□□ -0.64
SHMT2-212ENST00000554467 RPS26P11Q5JNZ5 115 aaPredicted RBP11.08□□□□□ -0.64
SHMT2-212ENST00000554467 ARMC8Q8IUR7 673 aa11.08□□□□□ -0.64
SHMT2-212ENST00000554467 ZCCHC7Q8N3Z6 543 aaKnown RBP11.08□□□□□ -0.64
SHMT2-212ENST00000554467 ZNF555Q8NEP9 628 aa11.08□□□□□ -0.64
SHMT2-212ENST00000554467 RGMAQ96B86 450 aa11.08□□□□□ -0.64
SHMT2-212ENST00000554467 ANKRA2Q9H9E1 313 aa11.08□□□□□ -0.64
SHMT2-212ENST00000554467 SAMD4AQ9UPU9 718 aaKnown RBP11.08□□□□□ -0.64
SHMT2-212ENST00000554467 AP3M1Q9Y2T2 418 aa11.08□□□□□ -0.64
SHMT2-212ENST00000554467 UGT2A1Q9Y4X1 527 aa11.08□□□□□ -0.64
SHMT2-212ENST00000554467 XPNPEP2O43895 674 aa11.07□□□□□ -0.64
SHMT2-212ENST00000554467 ICMTO60725 284 aa11.07□□□□□ -0.64
SHMT2-212ENST00000554467 ERAL1O75616 437 aaKnown RBP11.07□□□□□ -0.64
SHMT2-212ENST00000554467 INMTO95050 263 aa11.07□□□□□ -0.64
SHMT2-212ENST00000554467 CHRM5P08912 532 aaPredicted RBP11.07□□□□□ -0.64
SHMT2-212ENST00000554467 POLR2CP19387 275 aaPredicted RBP11.07□□□□□ -0.64
SHMT2-212ENST00000554467 DDCP20711 480 aa11.07□□□□□ -0.64
SHMT2-212ENST00000554467 CERS1P27544 350 aa11.07□□□□□ -0.64
SHMT2-212ENST00000554467 GP2P55259 537 aaKnown RBP11.07□□□□□ -0.64
SHMT2-212ENST00000554467 OCA2Q04671 838 aa11.07□□□□□ -0.64
SHMT2-212ENST00000554467 ADPRMQ3LIE5 342 aa11.07□□□□□ -0.64
SHMT2-212ENST00000554467 CEP78Q5JTW2 689 aa11.07□□□□□ -0.64
SHMT2-212ENST00000554467 OR4C11Q6IEV9 310 aa11.07□□□□□ -0.64
SHMT2-212ENST00000554467 NUDT13Q86X67 352 aa11.07□□□□□ -0.64
SHMT2-212ENST00000554467 KCT2Q8NC54 265 aa11.07□□□□□ -0.64
SHMT2-212ENST00000554467 SPPL2AQ8TCT8 520 aa11.07□□□□□ -0.64
SHMT2-212ENST00000554467 GAS2L1Q99501 681 aaPredicted RBP11.07□□□□□ -0.64
SHMT2-212ENST00000554467 MIR1-1HGQ9H1L0 117 aa11.07□□□□□ -0.64
SHMT2-212ENST00000554467 SRMSQ9H3Y6 488 aa11.07□□□□□ -0.64
SHMT2-212ENST00000554467 MVB12BQ9H7P6 319 aa11.07□□□□□ -0.64
SHMT2-212ENST00000554467 GSAPA4D1B5 854 aa11.07□□□□□ -0.64
SHMT2-212ENST00000554467 MBTPS2O43462 519 aa11.07□□□□□ -0.64
SHMT2-212ENST00000554467 ABCB7O75027 752 aa11.07□□□□□ -0.64
SHMT2-212ENST00000554467 CRHBPP24387 322 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms