RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 HUNKP57058 714 aa4.31□□□□□ -1.72
CHD8-207ENST00000554384 MSLNQ13421 630 aaPredicted RBP4.31□□□□□ -1.72
CHD8-207ENST00000554384 MRGPRG-AS1Q2M3A8 158 aa4.31□□□□□ -1.72
CHD8-207ENST00000554384 MOGAT2Q3SYC2 334 aa4.31□□□□□ -1.72
CHD8-207ENST00000554384 PRAMEF7Q5VXH5 474 aa4.31□□□□□ -1.72
CHD8-207ENST00000554384 KRTAP5-1Q6L8H4 278 aa4.31□□□□□ -1.72
CHD8-207ENST00000554384 NLRP14Q86W24 1093 aa4.31□□□□□ -1.72
CHD8-207ENST00000554384 GPATCH11Q8N954 259 aa4.31□□□□□ -1.72
CHD8-207ENST00000554384 RELL2Q8NC24 303 aaPredicted RBP4.31□□□□□ -1.72
CHD8-207ENST00000554384 CCDC197Q8NCU1 140 aa4.31□□□□□ -1.72
CHD8-207ENST00000554384 OR4L1Q8NH43 312 aa4.31□□□□□ -1.72
CHD8-207ENST00000554384 POM121L2Q96KW2 1035 aa4.31□□□□□ -1.72
CHD8-207ENST00000554384 GUCD1Q96NT3 240 aa4.31□□□□□ -1.72
CHD8-207ENST00000554384 TMEM237Q96Q45 408 aa4.31□□□□□ -1.72
CHD8-207ENST00000554384 KRT12Q99456 494 aa4.31□□□□□ -1.72
CHD8-207ENST00000554384 TSPYL1Q9H0U9 437 aa4.31□□□□□ -1.72
CHD8-207ENST00000554384 UPF3AQ9H1J1 476 aaKnown RBP4.31□□□□□ -1.72
CHD8-207ENST00000554384 DCLRE1BQ9H816 532 aa4.31□□□□□ -1.72
CHD8-207ENST00000554384 MTHFD2LQ9H903 347 aaPredicted RBP4.31□□□□□ -1.72
CHD8-207ENST00000554384 PLEKHA3Q9HB20 300 aa4.31□□□□□ -1.72
CHD8-207ENST00000554384 COMMD8Q9NX08 183 aa4.31□□□□□ -1.72
CHD8-207ENST00000554384 THAP10Q9P2Z0 257 aaPredicted RBP4.31□□□□□ -1.72
CHD8-207ENST00000554384 KLK11Q9UBX7 282 aa4.31□□□□□ -1.72
CHD8-207ENST00000554384 TDRKHQ9Y2W6 561 aaKnown RBP4.31□□□□□ -1.72
CHD8-207ENST00000554384 MRPS18CQ9Y3D5 142 aaKnown RBP4.31□□□□□ -1.72
CHD8-207ENST00000554384 MYH15Q9Y2K3 1946 aa4.31□□□□□ -1.72
CHD8-207ENST00000554384 HFM1A2PYH4 1435 aa4.3□□□□□ -1.72
CHD8-207ENST00000554384 SSH2Q76I76 1423 aa4.3□□□□□ -1.72
CHD8-207ENST00000554384 COL14A1Q05707 1796 aaKnown RBP4.3□□□□□ -1.72
CHD8-207ENST00000554384 RNF123Q5XPI4 1314 aa4.3□□□□□ -1.72
CHD8-207ENST00000554384 IGHV3-20A0A0C4DH32 117 aa4.3□□□□□ -1.72
CHD8-207ENST00000554384 K7EQD1 137 aa4.3□□□□□ -1.72
CHD8-207ENST00000554384 CSO75390 466 aaKnown RBP4.3□□□□□ -1.72
CHD8-207ENST00000554384 ABHD2P08910 425 aa4.3□□□□□ -1.72
CHD8-207ENST00000554384 TYMPP19971 482 aa4.3□□□□□ -1.72
CHD8-207ENST00000554384 KRTAP5-9P26371 169 aa4.3□□□□□ -1.72
CHD8-207ENST00000554384 ID1P41134 155 aa4.3□□□□□ -1.72
CHD8-207ENST00000554384 PITPNBP48739 271 aa4.3□□□□□ -1.72
CHD8-207ENST00000554384 NT5C2P49902 561 aa4.3□□□□□ -1.72
CHD8-207ENST00000554384 IRX1P78414 480 aaPredicted RBP4.3□□□□□ -1.72
CHD8-207ENST00000554384 CYCSP99999 105 aaKnown RBP4.3□□□□□ -1.72
CHD8-207ENST00000554384 CALCOCO2Q13137 446 aa4.3□□□□□ -1.72
CHD8-207ENST00000554384 KRT31Q15323 416 aa4.3□□□□□ -1.72
CHD8-207ENST00000554384 STX1AQ16623 288 aa4.3□□□□□ -1.72
CHD8-207ENST00000554384 FASTKD1Q53R41 847 aaKnown RBP4.3□□□□□ -1.72
CHD8-207ENST00000554384 ZC2HC1BQ5TFG8 222 aa4.3□□□□□ -1.72
CHD8-207ENST00000554384 NEPROQ6NW34 567 aa4.3□□□□□ -1.72
CHD8-207ENST00000554384 ZNF497Q6ZNH5 498 aa4.3□□□□□ -1.72
CHD8-207ENST00000554384 C1orf186Q6ZWK4 172 aa4.3□□□□□ -1.72
CHD8-207ENST00000554384 KRTAP7-1Q8IUC3 87 aa4.3□□□□□ -1.72
CHD8-207ENST00000554384 ELMOD1Q8N336 334 aa4.3□□□□□ -1.72
CHD8-207ENST00000554384 RTL3Q8N8U3 475 aaKnown RBP4.3□□□□□ -1.72
CHD8-207ENST00000554384 SIDT2Q8NBJ9 832 aaKnown RBP4.3□□□□□ -1.72
CHD8-207ENST00000554384 OR52B6Q8NGF0 335 aa4.3□□□□□ -1.72
CHD8-207ENST00000554384 OR52E1Q8NGJ3 308 aa4.3□□□□□ -1.72
CHD8-207ENST00000554384 LIPHQ8WWY8 451 aa4.3□□□□□ -1.72
CHD8-207ENST00000554384 CFAP36Q96G28 342 aa4.3□□□□□ -1.72
CHD8-207ENST00000554384 NSMCE3Q96MG7 304 aa4.3□□□□□ -1.72
CHD8-207ENST00000554384 IWS1Q96ST2 819 aa4.3□□□□□ -1.72
CHD8-207ENST00000554384 SSX3Q99909 188 aa4.3□□□□□ -1.72
CHD8-207ENST00000554384 AGPAT1Q99943 283 aa4.3□□□□□ -1.72
CHD8-207ENST00000554384 NUSAP1Q9BXS6 441 aaKnown RBP4.3□□□□□ -1.72
CHD8-207ENST00000554384 DDX28Q9NUL7 540 aaKnown RBP4.3□□□□□ -1.72
CHD8-207ENST00000554384 MIS18AQ9NYP9 233 aa4.3□□□□□ -1.72
CHD8-207ENST00000554384 NUDT4Q9NZJ9 180 aa4.3□□□□□ -1.72
CHD8-207ENST00000554384 WIPI2Q9Y4P8 454 aa4.3□□□□□ -1.72
CHD8-207ENST00000554384 TULP4Q9NRJ4 1543 aa4.3□□□□□ -1.72
CHD8-207ENST00000554384 PLEKHH1Q9ULM0 1364 aa4.29□□□□□ -1.72
CHD8-207ENST00000554384 CDC42BPGQ6DT37 1551 aa4.29□□□□□ -1.72
CHD8-207ENST00000554384 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.29□□□□□ -1.72
CHD8-207ENST00000554384 A0A0U1RQG5 324 aaPredicted RBP4.29□□□□□ -1.72
CHD8-207ENST00000554384 TCP10L2B9ZVM9 353 aa4.29□□□□□ -1.72
CHD8-207ENST00000554384 SLC28A1O00337 649 aa4.29□□□□□ -1.72
CHD8-207ENST00000554384 ZNF749O43361 778 aa4.29□□□□□ -1.72
CHD8-207ENST00000554384 ATP6V1G1O75348 118 aa4.29□□□□□ -1.72
CHD8-207ENST00000554384 CNN1P51911 297 aaKnown RBP4.29□□□□□ -1.72
CHD8-207ENST00000554384 CASP9P55211 416 aa4.29□□□□□ -1.72
CHD8-207ENST00000554384 HERV-K104P63124 156 aa4.29□□□□□ -1.72
CHD8-207ENST00000554384 ARF5P84085 180 aa4.29□□□□□ -1.72
CHD8-207ENST00000554384 ZNF177Q13360 481 aaPredicted RBP4.29□□□□□ -1.72
CHD8-207ENST00000554384 HEPACAMQ14CZ8 416 aa4.29□□□□□ -1.72
CHD8-207ENST00000554384 CEP85LQ5SZL2 805 aa4.29□□□□□ -1.72
CHD8-207ENST00000554384 RAB12Q6IQ22 244 aa4.29□□□□□ -1.72
CHD8-207ENST00000554384 GDPGP1Q6ZNW5 385 aa4.29□□□□□ -1.72
CHD8-207ENST00000554384 CYP4V2Q6ZWL3 525 aaPredicted RBP4.29□□□□□ -1.72
CHD8-207ENST00000554384 KCNMB4Q86W47 210 aa4.29□□□□□ -1.72
CHD8-207ENST00000554384 WDSUB1Q8N9V3 476 aa4.29□□□□□ -1.72
CHD8-207ENST00000554384 PSMA8Q8TAA3 256 aa4.29□□□□□ -1.72
CHD8-207ENST00000554384 URGCPQ8TCY9 931 aa4.29□□□□□ -1.72
CHD8-207ENST00000554384 CHURC1Q8WUH1 139 aa4.29□□□□□ -1.72
CHD8-207ENST00000554384 ABCG4Q9H172 646 aa4.29□□□□□ -1.72
CHD8-207ENST00000554384 CARD9Q9H257 536 aa4.29□□□□□ -1.72
CHD8-207ENST00000554384 S100A14Q9HCY8 104 aa4.29□□□□□ -1.72
CHD8-207ENST00000554384 MED17Q9NVC6 651 aa4.29□□□□□ -1.72
CHD8-207ENST00000554384 TEX10Q9NXF1 929 aaPredicted RBP4.29□□□□□ -1.72
CHD8-207ENST00000554384 TECRQ9NZ01 308 aaKnown RBP4.29□□□□□ -1.72
CHD8-207ENST00000554384 TRMT6Q9UJA5 497 aaKnown RBP4.29□□□□□ -1.72
CHD8-207ENST00000554384 ERVK-19Q9WJR5 959 aa4.29□□□□□ -1.72
CHD8-207ENST00000554384 ABCA3Q99758 1704 aa4.29□□□□□ -1.72
CHD8-207ENST00000554384 PHRF1Q9P1Y6 1649 aaKnown RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms