RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 RPF2Q9H7B2 306 aaKnown RBP12.18□□□□□ -0.46
SHMT2-211ENST00000554310 ADAM29Q9UKF5 820 aa12.18□□□□□ -0.46
SHMT2-211ENST00000554310 SNX6Q9UNH7 406 aa12.18□□□□□ -0.46
SHMT2-211ENST00000554310 ZGRF1Q86YA3 2104 aa12.17□□□□□ -0.46
SHMT2-211ENST00000554310 A0A1B0GTL3 188 aa12.17□□□□□ -0.46
SHMT2-211ENST00000554310 TMPRSS11DO60235 418 aa12.17□□□□□ -0.46
SHMT2-211ENST00000554310 FGF17O60258 216 aa12.17□□□□□ -0.46
SHMT2-211ENST00000554310 EDF1O60869 148 aaKnown RBP12.17□□□□□ -0.46
SHMT2-211ENST00000554310 EEDO75530 441 aaKnown RBP12.17□□□□□ -0.46
SHMT2-211ENST00000554310 SUPT7LO94864 414 aa12.17□□□□□ -0.46
SHMT2-211ENST00000554310 RASAL1O95294 804 aa12.17□□□□□ -0.46
SHMT2-211ENST00000554310 MLYCDO95822 493 aa12.17□□□□□ -0.46
SHMT2-211ENST00000554310 CRYABP02511 175 aaKnown RBP12.17□□□□□ -0.46
SHMT2-211ENST00000554310 NR2F6P10588 404 aa12.17□□□□□ -0.46
SHMT2-211ENST00000554310 CD46P15529 392 aa12.17□□□□□ -0.46
SHMT2-211ENST00000554310 IMPDH1P20839 514 aa12.17□□□□□ -0.46
SHMT2-211ENST00000554310 CD96P40200 585 aa12.17□□□□□ -0.46
SHMT2-211ENST00000554310 STT3AP46977 705 aa12.17□□□□□ -0.46
SHMT2-211ENST00000554310 GPR143P51810 404 aa12.17□□□□□ -0.46
SHMT2-211ENST00000554310 PLIN5Q00G26 463 aa12.17□□□□□ -0.46
SHMT2-211ENST00000554310 SRSF1Q07955 248 aaKnown RBP eCLIP12.17□□□□□ -0.46
SHMT2-211ENST00000554310 LCP2Q13094 533 aa12.17□□□□□ -0.46
SHMT2-211ENST00000554310 UNC50Q53HI1 259 aa12.17□□□□□ -0.46
SHMT2-211ENST00000554310 ZNF324BQ6AW86 544 aaPredicted RBP12.17□□□□□ -0.46
SHMT2-211ENST00000554310 MRM1Q6IN84 353 aaKnown RBP12.17□□□□□ -0.46
SHMT2-211ENST00000554310 GPRIN3Q6ZVF9 776 aa12.17□□□□□ -0.46
SHMT2-211ENST00000554310 RPS27LQ71UM5 84 aaKnown RBP12.17□□□□□ -0.46
SHMT2-211ENST00000554310 PAGE2Q7Z2X7 111 aa12.17□□□□□ -0.46
SHMT2-211ENST00000554310 DNAJB8Q8NHS0 232 aa12.17□□□□□ -0.46
SHMT2-211ENST00000554310 TRPC4APQ8TEL6 797 aa12.17□□□□□ -0.46
SHMT2-211ENST00000554310 PTPMT1Q8WUK0 201 aaPredicted RBP12.17□□□□□ -0.46
SHMT2-211ENST00000554310 NR4A3Q92570 626 aa12.17□□□□□ -0.46
SHMT2-211ENST00000554310 ZNF75CPQ92670 426 aaPredicted RBP12.17□□□□□ -0.46
SHMT2-211ENST00000554310 TANKQ92844 425 aa12.17□□□□□ -0.46
SHMT2-211ENST00000554310 ANKRD9Q96BM1 317 aaPredicted RBP12.17□□□□□ -0.46
SHMT2-211ENST00000554310 SIGLEC12Q96PQ1 595 aa12.17□□□□□ -0.46
SHMT2-211ENST00000554310 PELOQ9BRX2 385 aaKnown RBP12.17□□□□□ -0.46
SHMT2-211ENST00000554310 IQCGQ9H095 443 aaKnown RBP12.17□□□□□ -0.46
SHMT2-211ENST00000554310 TRIM45Q9H8W5 580 aaPredicted RBP12.17□□□□□ -0.46
SHMT2-211ENST00000554310 WDR41Q9HAD4 459 aa12.17□□□□□ -0.46
SHMT2-211ENST00000554310 BRF2Q9HAW0 419 aa12.17□□□□□ -0.46
SHMT2-211ENST00000554310 ANKRD10Q9NXR5 420 aa12.17□□□□□ -0.46
SHMT2-211ENST00000554310 AHSPQ9NZD4 102 aa12.17□□□□□ -0.46
SHMT2-211ENST00000554310 LRFN1Q9P244 771 aa12.17□□□□□ -0.46
SHMT2-211ENST00000554310 SLC17A7Q9P2U7 560 aa12.17□□□□□ -0.46
SHMT2-211ENST00000554310 ZNF223Q9UK11 482 aaPredicted RBP12.17□□□□□ -0.46
SHMT2-211ENST00000554310 ARL2BPQ9Y2Y0 163 aa12.17□□□□□ -0.46
SHMT2-211ENST00000554310 ATG4BQ9Y4P1 393 aa12.17□□□□□ -0.46
SHMT2-211ENST00000554310 C17orf105B2RV13 164 aa12.16□□□□□ -0.46
SHMT2-211ENST00000554310 PPP6CO00743 305 aa12.16□□□□□ -0.46
SHMT2-211ENST00000554310 PROM1O43490 865 aa12.16□□□□□ -0.46
SHMT2-211ENST00000554310 DYRK3O43781 588 aa12.16□□□□□ -0.46
SHMT2-211ENST00000554310 SLC25A12O75746 678 aa12.16□□□□□ -0.46
SHMT2-211ENST00000554310 NEURL1O76050 574 aa12.16□□□□□ -0.46
SHMT2-211ENST00000554310 ZFAND5O76080 213 aa12.16□□□□□ -0.46
SHMT2-211ENST00000554310 AGFG2O95081 481 aa12.16□□□□□ -0.46
SHMT2-211ENST00000554310 KRT6AP02538 564 aa12.16□□□□□ -0.46
SHMT2-211ENST00000554310 KRT6BP04259 564 aa12.16□□□□□ -0.46
SHMT2-211ENST00000554310 FAM58BPP0C7Q3 252 aa12.16□□□□□ -0.46
SHMT2-211ENST00000554310 MYL2P10916 166 aa12.16□□□□□ -0.46
SHMT2-211ENST00000554310 HSD3B1P14060 373 aa12.16□□□□□ -0.46
SHMT2-211ENST00000554310 TSPAN8P19075 237 aa12.16□□□□□ -0.46
SHMT2-211ENST00000554310 TNNI3P19429 210 aa12.16□□□□□ -0.46
SHMT2-211ENST00000554310 HSD3B2P26439 372 aa12.16□□□□□ -0.46
SHMT2-211ENST00000554310 CRHR1P34998 444 aa12.16□□□□□ -0.46
SHMT2-211ENST00000554310 KRT6CP48668 564 aa12.16□□□□□ -0.46
SHMT2-211ENST00000554310 CYB561P49447 251 aa12.16□□□□□ -0.46
SHMT2-211ENST00000554310 HLCSP50747 726 aa12.16□□□□□ -0.46
SHMT2-211ENST00000554310 TDGF1P3P51864 188 aa12.16□□□□□ -0.46
SHMT2-211ENST00000554310 NAA20P61599 178 aa12.16□□□□□ -0.46
SHMT2-211ENST00000554310 ID2Q02363 134 aa12.16□□□□□ -0.46
SHMT2-211ENST00000554310 FOLH1Q04609 750 aa12.16□□□□□ -0.46
SHMT2-211ENST00000554310 CCDC153Q494R4 210 aa12.16□□□□□ -0.46
SHMT2-211ENST00000554310 OR52E8Q6IFG1 317 aa12.16□□□□□ -0.46
SHMT2-211ENST00000554310 CGB2Q6NT52 195 aa12.16□□□□□ -0.46
SHMT2-211ENST00000554310 ZYG11AQ6WRX3 759 aa12.16□□□□□ -0.46
SHMT2-211ENST00000554310 HSDL2Q6YN16 418 aa12.16□□□□□ -0.46
SHMT2-211ENST00000554310 TRIM42Q8IWZ5 723 aa12.16□□□□□ -0.46
SHMT2-211ENST00000554310 FAM98AQ8NCA5 519 aaKnown RBP12.16□□□□□ -0.46
SHMT2-211ENST00000554310 OR8K3Q8NH51 312 aa12.16□□□□□ -0.46
SHMT2-211ENST00000554310 PRR7Q8TB68 274 aa12.16□□□□□ -0.46
SHMT2-211ENST00000554310 RDH11Q8TC12 318 aa12.16□□□□□ -0.46
SHMT2-211ENST00000554310 SLC2A12Q8TD20 617 aa12.16□□□□□ -0.46
SHMT2-211ENST00000554310 SELENOMQ8WWX9 145 aa12.16□□□□□ -0.46
SHMT2-211ENST00000554310 MTFMTQ96DP5 389 aaKnown RBP12.16□□□□□ -0.46
SHMT2-211ENST00000554310 ART5Q96L15 291 aa12.16□□□□□ -0.46
SHMT2-211ENST00000554310 DGAT2Q96PD7 388 aa12.16□□□□□ -0.46
SHMT2-211ENST00000554310 MRPL1Q9BYD6 325 aaKnown RBP12.16□□□□□ -0.46
SHMT2-211ENST00000554310 OR8D2Q9GZM6 311 aa12.16□□□□□ -0.46
SHMT2-211ENST00000554310 NMRK1Q9NWW6 199 aa12.16□□□□□ -0.46
SHMT2-211ENST00000554310 COPS7AQ9UBW8 275 aa12.16□□□□□ -0.46
SHMT2-211ENST00000554310 ZNF225Q9UK10 706 aa12.16□□□□□ -0.46
SHMT2-211ENST00000554310 EMCNQ9ULC0 261 aa12.16□□□□□ -0.46
SHMT2-211ENST00000554310 PLLPQ9Y342 182 aa12.16□□□□□ -0.46
SHMT2-211ENST00000554310 ASB4Q9Y574 426 aa12.16□□□□□ -0.46
SHMT2-211ENST00000554310 A0A1W2PR48 441 aa12.15□□□□□ -0.46
SHMT2-211ENST00000554310 ARHGAP10A1A4S6 786 aa12.15□□□□□ -0.46
SHMT2-211ENST00000554310 ASPDHA6ND91 283 aa12.15□□□□□ -0.46
SHMT2-211ENST00000554310 KLF11O14901 512 aa12.15□□□□□ -0.46
SHMT2-211ENST00000554310 NME2P1O60361 137 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms