RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 ZNF681Q96N22 645 aa7.2□□□□□ -1.26
TDP1-209ENST00000554180 CPPED1Q9BRF8 314 aaPredicted RBP7.2□□□□□ -1.26
TDP1-209ENST00000554180 PELOQ9BRX2 385 aaKnown RBP7.2□□□□□ -1.26
TDP1-209ENST00000554180 SPATA9Q9BWV2 254 aa7.2□□□□□ -1.26
TDP1-209ENST00000554180 SLC7A5P2Q9GIP4 190 aa7.2□□□□□ -1.26
TDP1-209ENST00000554180 TGIF2Q9GZN2 237 aa7.2□□□□□ -1.26
TDP1-209ENST00000554180 MUC13Q9H3R2 512 aa7.2□□□□□ -1.26
TDP1-209ENST00000554180 GLIPR2Q9H4G4 154 aa7.2□□□□□ -1.26
TDP1-209ENST00000554180 ALG2Q9H553 416 aa7.2□□□□□ -1.26
TDP1-209ENST00000554180 KAT8Q9H7Z6 458 aaKnown RBP7.2□□□□□ -1.26
TDP1-209ENST00000554180 TPT1P8Q9HAU6 139 aa7.2□□□□□ -1.26
TDP1-209ENST00000554180 ZNF304Q9HCX3 659 aa7.2□□□□□ -1.26
TDP1-209ENST00000554180 MKKSQ9NPJ1 570 aaPredicted RBP7.2□□□□□ -1.26
TDP1-209ENST00000554180 SEMA3GQ9NS98 782 aa7.2□□□□□ -1.26
TDP1-209ENST00000554180 SLC6A13Q9NSD5 602 aa7.2□□□□□ -1.26
TDP1-209ENST00000554180 C14orf105Q9NVL8 296 aa7.2□□□□□ -1.26
TDP1-209ENST00000554180 OCIAD1Q9NX40 245 aa7.2□□□□□ -1.26
TDP1-209ENST00000554180 CMTM6Q9NX76 183 aa7.2□□□□□ -1.26
TDP1-209ENST00000554180 ADA2Q9NZK5 511 aa7.2□□□□□ -1.26
TDP1-209ENST00000554180 DHCR7Q9UBM7 475 aaKnown RBP7.2□□□□□ -1.26
TDP1-209ENST00000554180 SUCOQ9UBS9 1254 aaKnown RBP7.2□□□□□ -1.26
TDP1-209ENST00000554180 CD300AQ9UGN4 299 aa7.2□□□□□ -1.26
TDP1-209ENST00000554180 NDOR1Q9UHB4 597 aa7.2□□□□□ -1.26
TDP1-209ENST00000554180 SLC7A8Q9UHI5 535 aa7.2□□□□□ -1.26
TDP1-209ENST00000554180 LOXL2Q9Y4K0 774 aa7.2□□□□□ -1.26
TDP1-209ENST00000554180 MMACHCQ9Y4U1 282 aa7.2□□□□□ -1.26
TDP1-209ENST00000554180 TMEM184BQ9Y519 407 aaPredicted RBP7.2□□□□□ -1.26
TDP1-209ENST00000554180 CNOT1A5YKK6 2376 aaKnown RBP7.2□□□□□ -1.26
TDP1-209ENST00000554180 PCNX2A6NKB5 2137 aa7.19□□□□□ -1.26
TDP1-209ENST00000554180 CCDC187A0A096LP49 1063 aa7.19□□□□□ -1.26
TDP1-209ENST00000554180 PRORSD1PA6NEY8 169 aa7.19□□□□□ -1.26
TDP1-209ENST00000554180 H0YHG0 523 aa7.19□□□□□ -1.26
TDP1-209ENST00000554180 CLIC1O00299 241 aa7.19□□□□□ -1.26
TDP1-209ENST00000554180 PLOD2O00469 737 aa7.19□□□□□ -1.26
TDP1-209ENST00000554180 HYAL3O43820 417 aaPredicted RBP7.19□□□□□ -1.26
TDP1-209ENST00000554180 FGF17O60258 216 aa7.19□□□□□ -1.26
TDP1-209ENST00000554180 CTNSO60931 367 aa7.19□□□□□ -1.26
TDP1-209ENST00000554180 DNAJB6O75190 326 aa7.19□□□□□ -1.26
TDP1-209ENST00000554180 CSO75390 466 aaKnown RBP7.19□□□□□ -1.26
TDP1-209ENST00000554180 PRKRAO75569 313 aaKnown RBP7.19□□□□□ -1.26
TDP1-209ENST00000554180 KRT75O95678 551 aa7.19□□□□□ -1.26
TDP1-209ENST00000554180 MT-CO3P00414 261 aa7.19□□□□□ -1.26
TDP1-209ENST00000554180 ALBP02768 609 aa7.19□□□□□ -1.26
TDP1-209ENST00000554180 GSNP06396 782 aa7.19□□□□□ -1.26
TDP1-209ENST00000554180 SLC35E2P0CK97 266 aa7.19□□□□□ -1.26
TDP1-209ENST00000554180 CEACAM1P13688 526 aa7.19□□□□□ -1.26
TDP1-209ENST00000554180 PORP16435 677 aaPredicted RBP7.19□□□□□ -1.26
TDP1-209ENST00000554180 GPX2P18283 190 aa7.19□□□□□ -1.26
TDP1-209ENST00000554180 GALNSP34059 522 aa7.19□□□□□ -1.26
TDP1-209ENST00000554180 RORAP35398 523 aa7.19□□□□□ -1.26
TDP1-209ENST00000554180 MTPNP58546 118 aa7.19□□□□□ -1.26
TDP1-209ENST00000554180 DCDP81605 110 aaKnown RBP7.19□□□□□ -1.26
TDP1-209ENST00000554180 PRR5P85299 388 aa7.19□□□□□ -1.26
TDP1-209ENST00000554180 MAT1AQ00266 395 aaKnown RBP7.19□□□□□ -1.26
TDP1-209ENST00000554180 PLIN5Q00G26 463 aa7.19□□□□□ -1.26
TDP1-209ENST00000554180 TRAP1Q12931 704 aaKnown RBP7.19□□□□□ -1.26
TDP1-209ENST00000554180 HSPB3Q12988 150 aa7.19□□□□□ -1.26
TDP1-209ENST00000554180 SERTAD2Q14140 314 aa7.19□□□□□ -1.26
TDP1-209ENST00000554180 TRIM25Q14258 630 aaKnown RBP7.19□□□□□ -1.26
TDP1-209ENST00000554180 FXNQ16595 210 aa7.19□□□□□ -1.26
TDP1-209ENST00000554180 GTDC1Q4AE62 458 aa7.19□□□□□ -1.26
TDP1-209ENST00000554180 NKAIN1Q4KMZ8 207 aa7.19□□□□□ -1.26
TDP1-209ENST00000554180 RABL3Q5HYI8 236 aa7.19□□□□□ -1.26
TDP1-209ENST00000554180 HES3Q5TGS1 186 aa7.19□□□□□ -1.26
TDP1-209ENST00000554180 PRAMEF17Q5VTA0 474 aa7.19□□□□□ -1.26
TDP1-209ENST00000554180 SAXO2Q658L1 398 aa7.19□□□□□ -1.26
TDP1-209ENST00000554180 ZNF385CQ66K41 422 aaPredicted RBP7.19□□□□□ -1.26
TDP1-209ENST00000554180 QSOX2Q6ZRP7 698 aa7.19□□□□□ -1.26
TDP1-209ENST00000554180 ASCL5Q7RTU5 278 aa7.19□□□□□ -1.26
TDP1-209ENST00000554180 ZNF551Q7Z340 670 aaPredicted RBP7.19□□□□□ -1.26
TDP1-209ENST00000554180 NET1Q7Z628 596 aaPredicted RBP7.19□□□□□ -1.26
TDP1-209ENST00000554180 SERPINA11Q86U17 422 aa7.19□□□□□ -1.26
TDP1-209ENST00000554180 PTRH1Q86Y79 214 aaKnown RBP7.19□□□□□ -1.26
TDP1-209ENST00000554180 HPS6Q86YV9 775 aa7.19□□□□□ -1.26
TDP1-209ENST00000554180 ST13P4Q8IZP2 240 aaPredicted RBP7.19□□□□□ -1.26
TDP1-209ENST00000554180 DTWD1Q8N5C7 304 aa7.19□□□□□ -1.26
TDP1-209ENST00000554180 TMEM52Q8NDY8 209 aa7.19□□□□□ -1.26
TDP1-209ENST00000554180 FAM13CQ8NE31 585 aa7.19□□□□□ -1.26
TDP1-209ENST00000554180 DEFB124Q8NES8 71 aa7.19□□□□□ -1.26
TDP1-209ENST00000554180 OR56A1Q8NGH5 318 aa7.19□□□□□ -1.26
TDP1-209ENST00000554180 ZNF675Q8TD23 568 aa7.19□□□□□ -1.26
TDP1-209ENST00000554180 ZFP90Q8TF47 636 aa7.19□□□□□ -1.26
TDP1-209ENST00000554180 COL26A1Q96A83 441 aa7.19□□□□□ -1.26
TDP1-209ENST00000554180 FKBP10Q96AY3 582 aa7.19□□□□□ -1.26
TDP1-209ENST00000554180 ASB9Q96DX5 294 aa7.19□□□□□ -1.26
TDP1-209ENST00000554180 CLIP3Q96DZ5 547 aa7.19□□□□□ -1.26
TDP1-209ENST00000554180 NEURL3Q96EH8 262 aa7.19□□□□□ -1.26
TDP1-209ENST00000554180 AURKBQ96GD4 344 aaPredicted RBP7.19□□□□□ -1.26
TDP1-209ENST00000554180 PEX11GQ96HA9 241 aa7.19□□□□□ -1.26
TDP1-209ENST00000554180 CLPTM1LQ96KA5 538 aa7.19□□□□□ -1.26
TDP1-209ENST00000554180 ZNF578Q96N58 590 aaPredicted RBP7.19□□□□□ -1.26
TDP1-209ENST00000554180 ECSITQ9BQ95 431 aa7.19□□□□□ -1.26
TDP1-209ENST00000554180 SLC35A5Q9BS91 424 aa7.19□□□□□ -1.26
TDP1-209ENST00000554180 THUMPD3Q9BV44 507 aaKnown RBP7.19□□□□□ -1.26
TDP1-209ENST00000554180 DDA1Q9BW61 102 aa7.19□□□□□ -1.26
TDP1-209ENST00000554180 ASPSCR1Q9BZE9 553 aa7.19□□□□□ -1.26
TDP1-209ENST00000554180 TRIM4Q9C037 500 aa7.19□□□□□ -1.26
TDP1-209ENST00000554180 B3GNT4Q9C0J1 378 aa7.19□□□□□ -1.26
TDP1-209ENST00000554180 SLC26A1Q9H2B4 701 aa7.19□□□□□ -1.26
TDP1-209ENST00000554180 CXorf36Q9H7Y0 433 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms