RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 MID2Q9UJV3 735 aa8.25□□□□□ -1.09
TDP1-208ENST00000553989 ERVK-11Q9UQG0 969 aa8.25□□□□□ -1.09
TDP1-208ENST00000553989 ASB1Q9Y576 335 aa8.25□□□□□ -1.09
TDP1-208ENST00000553989 FBN2P35556 2912 aa8.25□□□□□ -1.09
TDP1-208ENST00000553989 CACNA1CQ13936 2221 aa8.25□□□□□ -1.09
TDP1-208ENST00000553989 ANKRD17O75179 2603 aaKnown RBP8.24□□□□□ -1.09
TDP1-208ENST00000553989 CSMD2Q7Z408 3487 aa8.24□□□□□ -1.09
TDP1-208ENST00000553989 NKX2-6A6NCS4 301 aa8.24□□□□□ -1.09
TDP1-208ENST00000553989 A6NHS1 94 aa8.24□□□□□ -1.09
TDP1-208ENST00000553989 CAPN14A8MX76 684 aa8.24□□□□□ -1.09
TDP1-208ENST00000553989 CXorf49A8MYA2 514 aaPredicted RBP8.24□□□□□ -1.09
TDP1-208ENST00000553989 ACOT7O00154 380 aa8.24□□□□□ -1.09
TDP1-208ENST00000553989 PEX1O43933 1283 aa8.24□□□□□ -1.09
TDP1-208ENST00000553989 DNAJB6O75190 326 aa8.24□□□□□ -1.09
TDP1-208ENST00000553989 ITGA10O75578 1167 aa8.24□□□□□ -1.09
TDP1-208ENST00000553989 PDE9AO76083 593 aa8.24□□□□□ -1.09
TDP1-208ENST00000553989 MYO1DO94832 1006 aa8.24□□□□□ -1.09
TDP1-208ENST00000553989 PSMG1O95456 288 aa8.24□□□□□ -1.09
TDP1-208ENST00000553989 SERPINE1P05121 402 aa8.24□□□□□ -1.09
TDP1-208ENST00000553989 TFEBP19484 476 aa8.24□□□□□ -1.09
TDP1-208ENST00000553989 SAT1P21673 171 aa8.24□□□□□ -1.09
TDP1-208ENST00000553989 CALRP27797 417 aaKnown RBP8.24□□□□□ -1.09
TDP1-208ENST00000553989 PRDX6P30041 224 aa8.24□□□□□ -1.09
TDP1-208ENST00000553989 PTDSS1P48651 473 aaKnown RBP8.24□□□□□ -1.09
TDP1-208ENST00000553989 CDKN2DP55273 166 aa8.24□□□□□ -1.09
TDP1-208ENST00000553989 AP1S2P56377 157 aa8.24□□□□□ -1.09
TDP1-208ENST00000553989 IL2P60568 153 aa8.24□□□□□ -1.09
TDP1-208ENST00000553989 PLGLB1Q02325 96 aa8.24□□□□□ -1.09
TDP1-208ENST00000553989 ILF2Q12905 390 aaKnown RBP8.24□□□□□ -1.09
TDP1-208ENST00000553989 CHI3L2Q15782 390 aa8.24□□□□□ -1.09
TDP1-208ENST00000553989 TOR1AIP1Q5JTV8 583 aa8.24□□□□□ -1.09
TDP1-208ENST00000553989 CATSPEREQ5SY80 951 aa8.24□□□□□ -1.09
TDP1-208ENST00000553989 RBM20Q5T481 1227 aaKnown RBP8.24□□□□□ -1.09
TDP1-208ENST00000553989 ARHGAP11AQ6P4F7 1023 aa8.24□□□□□ -1.09
TDP1-208ENST00000553989 SULF2Q8IWU5 870 aa8.24□□□□□ -1.09
TDP1-208ENST00000553989 SCUBE1Q8IWY4 988 aa8.24□□□□□ -1.09
TDP1-208ENST00000553989 AFAP1L2Q8N4X5 818 aa8.24□□□□□ -1.09
TDP1-208ENST00000553989 C2CD4AQ8NCU7 369 aaPredicted RBP8.24□□□□□ -1.09
TDP1-208ENST00000553989 ABHD11Q8NFV4 315 aa8.24□□□□□ -1.09
TDP1-208ENST00000553989 OR5M3Q8NGP4 307 aa8.24□□□□□ -1.09
TDP1-208ENST00000553989 NT5CQ8TCD5 201 aa8.24□□□□□ -1.09
TDP1-208ENST00000553989 UTP15Q8TED0 518 aaKnown RBP8.24□□□□□ -1.09
TDP1-208ENST00000553989 STON2Q8WXE9 905 aa8.24□□□□□ -1.09
TDP1-208ENST00000553989 RND1Q92730 232 aa8.24□□□□□ -1.09
TDP1-208ENST00000553989 NEIL2Q969S2 332 aa8.24□□□□□ -1.09
TDP1-208ENST00000553989 CMTM5Q96DZ9 223 aa8.24□□□□□ -1.09
TDP1-208ENST00000553989 FAR2Q96K12 515 aa8.24□□□□□ -1.09
TDP1-208ENST00000553989 RILPQ96NA2 401 aa8.24□□□□□ -1.09
TDP1-208ENST00000553989 DMRTA2Q96SC8 542 aa8.24□□□□□ -1.09
TDP1-208ENST00000553989 CPNE1Q99829 537 aa8.24□□□□□ -1.09
TDP1-208ENST00000553989 AIF1LQ9BQI0 150 aa8.24□□□□□ -1.09
TDP1-208ENST00000553989 CCDC28BQ9BUN5 200 aa8.24□□□□□ -1.09
TDP1-208ENST00000553989 ENKD1Q9H0I2 346 aa8.24□□□□□ -1.09
TDP1-208ENST00000553989 VCX3BQ9H321 246 aa8.24□□□□□ -1.09
TDP1-208ENST00000553989 TP63Q9H3D4 680 aaPredicted RBP8.24□□□□□ -1.09
TDP1-208ENST00000553989 TIMMDC1Q9NPL8 285 aa8.24□□□□□ -1.09
TDP1-208ENST00000553989 PNO1Q9NRX1 252 aaKnown RBP8.24□□□□□ -1.09
TDP1-208ENST00000553989 MRGBPQ9NV56 204 aa8.24□□□□□ -1.09
TDP1-208ENST00000553989 BCAP29Q9UHQ4 241 aa8.24□□□□□ -1.09
TDP1-208ENST00000553989 POLQO75417 2590 aa8.24□□□□□ -1.09
TDP1-208ENST00000553989 CCDC168Q8NDH2 2452 aa8.24□□□□□ -1.09
TDP1-208ENST00000553989 TCRBV16S1A1N1A0A5B0 115 aa8.23□□□□□ -1.09
TDP1-208ENST00000553989 FAM166BA8MTA8 275 aa8.23□□□□□ -1.09
TDP1-208ENST00000553989 A8MVJ9 347 aa8.23□□□□□ -1.09
TDP1-208ENST00000553989 ADAM10O14672 748 aa8.23□□□□□ -1.09
TDP1-208ENST00000553989 ADSLP30566 484 aaPredicted RBP8.23□□□□□ -1.09
TDP1-208ENST00000553989 CHRNB4P30926 498 aa8.23□□□□□ -1.09
TDP1-208ENST00000553989 TRHRP34981 398 aaPredicted RBP8.23□□□□□ -1.09
TDP1-208ENST00000553989 AHRP35869 848 aa8.23□□□□□ -1.09
TDP1-208ENST00000553989 GP5P40197 560 aa8.23□□□□□ -1.09
TDP1-208ENST00000553989 SSR4P51571 173 aa8.23□□□□□ -1.09
TDP1-208ENST00000553989 AQP5P55064 265 aa8.23□□□□□ -1.09
TDP1-208ENST00000553989 BTN3A2P78410 334 aa8.23□□□□□ -1.09
TDP1-208ENST00000553989 REEP5Q00765 189 aa8.23□□□□□ -1.09
TDP1-208ENST00000553989 SLC13A2Q13183 592 aa8.23□□□□□ -1.09
TDP1-208ENST00000553989 MYBPHQ13203 477 aa8.23□□□□□ -1.09
TDP1-208ENST00000553989 KPNB1Q14974 876 aaKnown RBP8.23□□□□□ -1.09
TDP1-208ENST00000553989 MROH9Q5TGP6 573 aa8.23□□□□□ -1.09
TDP1-208ENST00000553989 HECTD2Q5U5R9 776 aa8.23□□□□□ -1.09
TDP1-208ENST00000553989 PAOXQ6QHF9 649 aa8.23□□□□□ -1.09
TDP1-208ENST00000553989 RINLQ6ZS11 566 aa8.23□□□□□ -1.09
TDP1-208ENST00000553989 FGD2Q7Z6J4 655 aa8.23□□□□□ -1.09
TDP1-208ENST00000553989 STRA8Q7Z7C7 330 aa8.23□□□□□ -1.09
TDP1-208ENST00000553989 CHERPQ8IWX8 916 aaKnown RBP8.23□□□□□ -1.09
TDP1-208ENST00000553989 TRPV3Q8NET8 790 aa8.23□□□□□ -1.09
TDP1-208ENST00000553989 B3GNT7Q8NFL0 401 aa8.23□□□□□ -1.09
TDP1-208ENST00000553989 OR4K1Q8NGD4 311 aa8.23□□□□□ -1.09
TDP1-208ENST00000553989 OR10Q1Q8NGQ4 319 aa8.23□□□□□ -1.09
TDP1-208ENST00000553989 OR56A3Q8NH54 315 aa8.23□□□□□ -1.09
TDP1-208ENST00000553989 PIWIL2Q8TC59 973 aaKnown RBP8.23□□□□□ -1.09
TDP1-208ENST00000553989 ASB15Q8WXK1 588 aa8.23□□□□□ -1.09
TDP1-208ENST00000553989 FBXL8Q96CD0 374 aa8.23□□□□□ -1.09
TDP1-208ENST00000553989 VMP1Q96GC9 406 aa8.23□□□□□ -1.09
TDP1-208ENST00000553989 OR4K3Q96R72 315 aa8.23□□□□□ -1.09
TDP1-208ENST00000553989 NR1H4Q96RI1 486 aaPredicted RBP8.23□□□□□ -1.09
TDP1-208ENST00000553989 EGFL8Q99944 293 aa8.23□□□□□ -1.09
TDP1-208ENST00000553989 ZNF559Q9BR84 538 aa8.23□□□□□ -1.09
TDP1-208ENST00000553989 SARGQ9BW04 601 aa8.23□□□□□ -1.09
TDP1-208ENST00000553989 CCDC106Q9BWC9 280 aa8.23□□□□□ -1.09
TDP1-208ENST00000553989 DEFB127Q9H1M4 99 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms