RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 DGKQP52824 942 aa13.63□□□□□ -0.23
SHMT2-210ENST00000553950 MANFP55145 182 aaKnown RBP13.63□□□□□ -0.23
SHMT2-210ENST00000553950 PCBP4P57723 403 aaKnown RBP13.63□□□□□ -0.23
SHMT2-210ENST00000553950 IGLV3-21P80748 117 aaPredicted RBP13.63□□□□□ -0.23
SHMT2-210ENST00000553950 BNIP1Q12981 228 aa13.63□□□□□ -0.23
SHMT2-210ENST00000553950 NFYCQ13952 458 aa13.63□□□□□ -0.23
SHMT2-210ENST00000553950 RTP5Q14D33 572 aa13.63□□□□□ -0.23
SHMT2-210ENST00000553950 SYT16Q17RD7 645 aa13.63□□□□□ -0.23
SHMT2-210ENST00000553950 DNAL1Q4LDG9 190 aa13.63□□□□□ -0.23
SHMT2-210ENST00000553950 ZNF385BQ569K4 471 aa13.63□□□□□ -0.23
SHMT2-210ENST00000553950 ANKRD26P1Q6NSI1 321 aa13.63□□□□□ -0.23
SHMT2-210ENST00000553950 MRPL14Q6P1L8 145 aaKnown RBP13.63□□□□□ -0.23
SHMT2-210ENST00000553950 BHLHB9Q6PI77 547 aa13.63□□□□□ -0.23
SHMT2-210ENST00000553950 DHDDSQ86SQ9 333 aa13.63□□□□□ -0.23
SHMT2-210ENST00000553950 ST13P4Q8IZP2 240 aaPredicted RBP13.63□□□□□ -0.23
SHMT2-210ENST00000553950 DTWD1Q8N5C7 304 aa13.63□□□□□ -0.23
SHMT2-210ENST00000553950 POU5F2Q8N7G0 328 aa13.63□□□□□ -0.23
SHMT2-210ENST00000553950 OR4A15Q8NGL6 344 aa13.63□□□□□ -0.23
SHMT2-210ENST00000553950 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.63□□□□□ -0.23
SHMT2-210ENST00000553950 METTL21AQ8WXB1 218 aa13.63□□□□□ -0.23
SHMT2-210ENST00000553950 PMEPA1Q969W9 287 aa13.63□□□□□ -0.23
SHMT2-210ENST00000553950 VPS33AQ96AX1 596 aa13.63□□□□□ -0.23
SHMT2-210ENST00000553950 RCN3Q96D15 328 aa13.63□□□□□ -0.23
SHMT2-210ENST00000553950 ZNF578Q96N58 590 aaPredicted RBP13.63□□□□□ -0.23
SHMT2-210ENST00000553950 DGAT2Q96PD7 388 aa13.63□□□□□ -0.23
SHMT2-210ENST00000553950 PANX1Q96RD7 426 aa13.63□□□□□ -0.23
SHMT2-210ENST00000553950 C1orf21Q9H246 121 aa13.63□□□□□ -0.23
SHMT2-210ENST00000553950 LANCL2Q9NS86 450 aa13.63□□□□□ -0.23
SHMT2-210ENST00000553950 TAS2R9Q9NYW1 312 aa13.63□□□□□ -0.23
SHMT2-210ENST00000553950 FOXJ2Q9P0K8 574 aa13.63□□□□□ -0.23
SHMT2-210ENST00000553950 VPS4AQ9UN37 437 aa13.63□□□□□ -0.23
SHMT2-210ENST00000553950 CORO2BQ9UQ03 480 aa13.63□□□□□ -0.23
SHMT2-210ENST00000553950 AP3M1Q9Y2T2 418 aa13.63□□□□□ -0.23
SHMT2-210ENST00000553950 PGRMC2O15173 223 aa13.62□□□□□ -0.23
SHMT2-210ENST00000553950 FGF17O60258 216 aa13.62□□□□□ -0.23
SHMT2-210ENST00000553950 RAD1O60671 282 aa13.62□□□□□ -0.23
SHMT2-210ENST00000553950 PRKRAO75569 313 aaKnown RBP13.62□□□□□ -0.23
SHMT2-210ENST00000553950 HEXBP07686 556 aa13.62□□□□□ -0.23
SHMT2-210ENST00000553950 ZCCHC18P0CG32 403 aa13.62□□□□□ -0.23
SHMT2-210ENST00000553950 SLC35E2P0CK97 266 aa13.62□□□□□ -0.23
SHMT2-210ENST00000553950 SLC5A2P31639 672 aa13.62□□□□□ -0.23
SHMT2-210ENST00000553950 GPC1P35052 558 aa13.62□□□□□ -0.23
SHMT2-210ENST00000553950 FOLR3P41439 243 aa13.62□□□□□ -0.23
SHMT2-210ENST00000553950 XKP51811 444 aa13.62□□□□□ -0.23
SHMT2-210ENST00000553950 TLR1Q15399 786 aa13.62□□□□□ -0.23
SHMT2-210ENST00000553950 NKG7Q16617 165 aa13.62□□□□□ -0.23
SHMT2-210ENST00000553950 LRIF1Q5T3J3 769 aa13.62□□□□□ -0.23
SHMT2-210ENST00000553950 CPZQ66K79 652 aa13.62□□□□□ -0.23
SHMT2-210ENST00000553950 TMEM64Q6YI46 380 aa13.62□□□□□ -0.23
SHMT2-210ENST00000553950 MMP21Q8N119 569 aa13.62□□□□□ -0.23
SHMT2-210ENST00000553950 PLPP5Q8NEB5 264 aa13.62□□□□□ -0.23
SHMT2-210ENST00000553950 GOT1L1Q8NHS2 421 aaPredicted RBP13.62□□□□□ -0.23
SHMT2-210ENST00000553950 SFXN5Q8TD22 340 aa13.62□□□□□ -0.23
SHMT2-210ENST00000553950 ZNF675Q8TD23 568 aa13.62□□□□□ -0.23
SHMT2-210ENST00000553950 CNRIP1Q96F85 164 aaPredicted RBP13.62□□□□□ -0.23
SHMT2-210ENST00000553950 ART5Q96L15 291 aa13.62□□□□□ -0.23
SHMT2-210ENST00000553950 AMDHD1Q96NU7 426 aa13.62□□□□□ -0.23
SHMT2-210ENST00000553950 SH3GL1Q99961 368 aa13.62□□□□□ -0.23
SHMT2-210ENST00000553950 CRB3Q9BUF7 120 aa13.62□□□□□ -0.23
SHMT2-210ENST00000553950 EFHD1Q9BUP0 239 aa13.62□□□□□ -0.23
SHMT2-210ENST00000553950 CHST8Q9H2A9 424 aa13.62□□□□□ -0.23
SHMT2-210ENST00000553950 RAD21L1Q9H4I0 556 aa13.62□□□□□ -0.23
SHMT2-210ENST00000553950 ADAP2Q9NPF8 381 aa13.62□□□□□ -0.23
SHMT2-210ENST00000553950 SLC52A3Q9NQ40 469 aa13.62□□□□□ -0.23
SHMT2-210ENST00000553950 SLC22A11Q9NSA0 550 aa13.62□□□□□ -0.23
SHMT2-210ENST00000553950 C5AR2Q9P296 337 aa13.62□□□□□ -0.23
SHMT2-210ENST00000553950 KCND3Q9UK17 655 aa13.62□□□□□ -0.23
SHMT2-210ENST00000553950 MKL2Q9ULH7 1088 aa13.62□□□□□ -0.23
SHMT2-210ENST00000553950 IGKV3D-11A0A0A0MRZ8 115 aa13.61□□□□□ -0.23
SHMT2-210ENST00000553950 AIM2O14862 343 aa13.61□□□□□ -0.23
SHMT2-210ENST00000553950 BRINP1O60477 761 aa13.61□□□□□ -0.23
SHMT2-210ENST00000553950 LDB3O75112 727 aa13.61□□□□□ -0.23
SHMT2-210ENST00000553950 CDC123O75794 336 aaPredicted RBP13.61□□□□□ -0.23
SHMT2-210ENST00000553950 STAT5AP42229 794 aa13.61□□□□□ -0.23
SHMT2-210ENST00000553950 MAGEA8P43361 318 aa13.61□□□□□ -0.23
SHMT2-210ENST00000553950 STT3AP46977 705 aa13.61□□□□□ -0.23
SHMT2-210ENST00000553950 ANXA11P50995 505 aaKnown RBP13.61□□□□□ -0.23
SHMT2-210ENST00000553950 WNT3P56703 355 aa13.61□□□□□ -0.23
SHMT2-210ENST00000553950 RPS15P62841 145 aaKnown RBP13.61□□□□□ -0.23
SHMT2-210ENST00000553950 TXNL4AP83876 142 aaKnown RBP13.61□□□□□ -0.23
SHMT2-210ENST00000553950 PRR5P85299 388 aa13.61□□□□□ -0.23
SHMT2-210ENST00000553950 RHAGQ02094 409 aa13.61□□□□□ -0.23
SHMT2-210ENST00000553950 FOXC1Q12948 553 aa13.61□□□□□ -0.23
SHMT2-210ENST00000553950 HSPB3Q12988 150 aa13.61□□□□□ -0.23
SHMT2-210ENST00000553950 MLIPQ5VWP3 458 aa13.61□□□□□ -0.23
SHMT2-210ENST00000553950 SLC2A7Q6PXP3 512 aa13.61□□□□□ -0.23
SHMT2-210ENST00000553950 TMEM52Q8NDY8 209 aa13.61□□□□□ -0.23
SHMT2-210ENST00000553950 OR2Y1Q8NGV0 311 aa13.61□□□□□ -0.23
SHMT2-210ENST00000553950 PSMA8Q8TAA3 256 aa13.61□□□□□ -0.23
SHMT2-210ENST00000553950 GTF2H4Q92759 462 aa13.61□□□□□ -0.23
SHMT2-210ENST00000553950 CIDECQ96AQ7 238 aaPredicted RBP13.61□□□□□ -0.23
SHMT2-210ENST00000553950 KIAA1143Q96AT1 154 aaPredicted RBP13.61□□□□□ -0.23
SHMT2-210ENST00000553950 NACC2Q96BF6 587 aa13.61□□□□□ -0.23
SHMT2-210ENST00000553950 SLC45A3Q96JT2 553 aa13.61□□□□□ -0.23
SHMT2-210ENST00000553950 ZNF681Q96N22 645 aa13.61□□□□□ -0.23
SHMT2-210ENST00000553950 PTCHD1Q96NR3 888 aa13.61□□□□□ -0.23
SHMT2-210ENST00000553950 SPSB2Q99619 263 aa13.61□□□□□ -0.23
SHMT2-210ENST00000553950 HOPXQ9BPY8 73 aaPredicted RBP13.61□□□□□ -0.23
SHMT2-210ENST00000553950 GPR87Q9BY21 358 aa13.61□□□□□ -0.23
SHMT2-210ENST00000553950 SPRY4Q9C004 299 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms