RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 C16orf78Q8WTQ4 265 aa5□□□□□ -1.61
TMEM55B-204ENST00000553602 SETD7Q8WTS6 366 aaKnown RBP5□□□□□ -1.61
TMEM55B-204ENST00000553602 ASB15Q8WXK1 588 aa5□□□□□ -1.61
TMEM55B-204ENST00000553602 OR5P2Q8WZ92 322 aa5□□□□□ -1.61
TMEM55B-204ENST00000553602 SLC7A6Q92536 515 aa5□□□□□ -1.61
TMEM55B-204ENST00000553602 MRPS31Q92665 395 aaKnown RBP5□□□□□ -1.61
TMEM55B-204ENST00000553602 FGF11Q92914 225 aa5□□□□□ -1.61
TMEM55B-204ENST00000553602 GLYATL1Q969I3 302 aa5□□□□□ -1.61
TMEM55B-204ENST00000553602 MAL2Q969L2 176 aa5□□□□□ -1.61
TMEM55B-204ENST00000553602 NEIL2Q969S2 332 aa5□□□□□ -1.61
TMEM55B-204ENST00000553602 RNF170Q96K19 258 aa5□□□□□ -1.61
TMEM55B-204ENST00000553602 ZNF514Q96K75 400 aaPredicted RBP5□□□□□ -1.61
TMEM55B-204ENST00000553602 LINC00615Q96LM1 132 aaPredicted RBP5□□□□□ -1.61
TMEM55B-204ENST00000553602 SLC6A18Q96N87 628 aa5□□□□□ -1.61
TMEM55B-204ENST00000553602 DEPDC7Q96QD5 511 aa5□□□□□ -1.61
TMEM55B-204ENST00000553602 OR5M11Q96RB7 305 aa5□□□□□ -1.61
TMEM55B-204ENST00000553602 WRAP53Q9BUR4 548 aaKnown RBP5□□□□□ -1.61
TMEM55B-204ENST00000553602 YIPF2Q9BWQ6 316 aa5□□□□□ -1.61
TMEM55B-204ENST00000553602 JAM3Q9BX67 310 aa5□□□□□ -1.61
TMEM55B-204ENST00000553602 GON7Q9BXV9 100 aa5□□□□□ -1.61
TMEM55B-204ENST00000553602 NLNQ9BYT8 704 aa5□□□□□ -1.61
TMEM55B-204ENST00000553602 PRRG3Q9BZD7 231 aa5□□□□□ -1.61
TMEM55B-204ENST00000553602 BARHL1Q9BZE3 327 aa5□□□□□ -1.61
TMEM55B-204ENST00000553602 ATG10Q9H0Y0 220 aa5□□□□□ -1.61
TMEM55B-204ENST00000553602 TP63Q9H3D4 680 aaPredicted RBP5□□□□□ -1.61
TMEM55B-204ENST00000553602 FAM83DQ9H4H8 585 aa5□□□□□ -1.61
TMEM55B-204ENST00000553602 ANKRD19PQ9H560 264 aa5□□□□□ -1.61
TMEM55B-204ENST00000553602 NT5DC2Q9H857 520 aa5□□□□□ -1.61
TMEM55B-204ENST00000553602 FGF20Q9NP95 211 aaPredicted RBP5□□□□□ -1.61
TMEM55B-204ENST00000553602 DIABLOQ9NR28 239 aa5□□□□□ -1.61
TMEM55B-204ENST00000553602 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5□□□□□ -1.61
TMEM55B-204ENST00000553602 ACSS1Q9NUB1 689 aaPredicted RBP5□□□□□ -1.61
TMEM55B-204ENST00000553602 TAS2R7Q9NYW3 318 aa5□□□□□ -1.61
TMEM55B-204ENST00000553602 KLHL21Q9UJP4 597 aa5□□□□□ -1.61
TMEM55B-204ENST00000553602 ADAM29Q9UKF5 820 aa5□□□□□ -1.61
TMEM55B-204ENST00000553602 OGDHLQ9ULD0 1010 aa5□□□□□ -1.61
TMEM55B-204ENST00000553602 TMCC3Q9ULS5 477 aa5□□□□□ -1.61
TMEM55B-204ENST00000553602 SSR3Q9UNL2 185 aa5□□□□□ -1.61
TMEM55B-204ENST00000553602 DYRK1BQ9Y463 629 aa5□□□□□ -1.61
TMEM55B-204ENST00000553602 CMAHPQ9Y471 501 aa5□□□□□ -1.61
TMEM55B-204ENST00000553602 N6AMT1Q9Y5N5 214 aa5□□□□□ -1.61
TMEM55B-204ENST00000553602 ALPK3Q96L96 1907 aa4.99□□□□□ -1.61
TMEM55B-204ENST00000553602 TRAV19A0A0A6YYK7 116 aa4.99□□□□□ -1.61
TMEM55B-204ENST00000553602 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.99□□□□□ -1.61
TMEM55B-204ENST00000553602 A0A1W2PQ09 198 aa4.99□□□□□ -1.61
TMEM55B-204ENST00000553602 A0A1W2PRB8 838 aa4.99□□□□□ -1.61
TMEM55B-204ENST00000553602 MEIOCA2RUB1 952 aa4.99□□□□□ -1.61
TMEM55B-204ENST00000553602 ANKRD34BA5PLL1 514 aa4.99□□□□□ -1.61
TMEM55B-204ENST00000553602 CENPXA8MT69 81 aa4.99□□□□□ -1.61
TMEM55B-204ENST00000553602 NT5C1B-RDH14C9J2C7 533 aa4.99□□□□□ -1.61
TMEM55B-204ENST00000553602 CTDSP2O14595 271 aa4.99□□□□□ -1.61
TMEM55B-204ENST00000553602 PCDH17O14917 1159 aa4.99□□□□□ -1.61
TMEM55B-204ENST00000553602 MYL12BO14950 172 aa4.99□□□□□ -1.61
TMEM55B-204ENST00000553602 POLR1CO15160 346 aaPredicted RBP4.99□□□□□ -1.61
TMEM55B-204ENST00000553602 CASC3O15234 703 aaKnown RBP4.99□□□□□ -1.61
TMEM55B-204ENST00000553602 HOXC11O43248 304 aaPredicted RBP4.99□□□□□ -1.61
TMEM55B-204ENST00000553602 MMP20O60882 483 aa4.99□□□□□ -1.61
TMEM55B-204ENST00000553602 CSO75390 466 aaKnown RBP4.99□□□□□ -1.61
TMEM55B-204ENST00000553602 ALX3O95076 343 aa4.99□□□□□ -1.61
TMEM55B-204ENST00000553602 MFN2O95140 757 aa4.99□□□□□ -1.61
TMEM55B-204ENST00000553602 C1orf105O95561 183 aa4.99□□□□□ -1.61
TMEM55B-204ENST00000553602 RAB36O95755 333 aa4.99□□□□□ -1.61
TMEM55B-204ENST00000553602 C1QCP02747 245 aa4.99□□□□□ -1.61
TMEM55B-204ENST00000553602 OPN1SWP03999 348 aa4.99□□□□□ -1.61
TMEM55B-204ENST00000553602 H1F0P07305 194 aaKnown RBP4.99□□□□□ -1.61
TMEM55B-204ENST00000553602 HBQ1P09105 142 aa4.99□□□□□ -1.61
TMEM55B-204ENST00000553602 ERGP11308 486 aa4.99□□□□□ -1.61
TMEM55B-204ENST00000553602 DDCP20711 480 aa4.99□□□□□ -1.61
TMEM55B-204ENST00000553602 CPN2P22792 545 aa4.99□□□□□ -1.61
TMEM55B-204ENST00000553602 TCEA1P23193 301 aaKnown RBP4.99□□□□□ -1.61
TMEM55B-204ENST00000553602 CXCR2P25025 360 aa4.99□□□□□ -1.61
TMEM55B-204ENST00000553602 DDX6P26196 483 aaKnown RBP eCLIP4.99□□□□□ -1.61
TMEM55B-204ENST00000553602 ELAVL4P26378 380 aaKnown RBP4.99□□□□□ -1.61
TMEM55B-204ENST00000553602 AQP1P29972 269 aa4.99□□□□□ -1.61
TMEM55B-204ENST00000553602 ERP29P30040 261 aaKnown RBP4.99□□□□□ -1.61
TMEM55B-204ENST00000553602 GABRA5P31644 462 aa4.99□□□□□ -1.61
TMEM55B-204ENST00000553602 CD70P32970 193 aa4.99□□□□□ -1.61
TMEM55B-204ENST00000553602 CHI3L1P36222 383 aaPredicted RBP4.99□□□□□ -1.61
TMEM55B-204ENST00000553602 MMP12P39900 470 aa4.99□□□□□ -1.61
TMEM55B-204ENST00000553602 KCNJ5P48544 419 aa4.99□□□□□ -1.61
TMEM55B-204ENST00000553602 DGKGP49619 791 aa4.99□□□□□ -1.61
TMEM55B-204ENST00000553602 ANXA11P50995 505 aaKnown RBP4.99□□□□□ -1.61
TMEM55B-204ENST00000553602 XKP51811 444 aa4.99□□□□□ -1.61
TMEM55B-204ENST00000553602 ARFIP1P53367 373 aa4.99□□□□□ -1.61
TMEM55B-204ENST00000553602 RAB25P57735 213 aa4.99□□□□□ -1.61
TMEM55B-204ENST00000553602 RPS13P62277 151 aaKnown RBP4.99□□□□□ -1.61
TMEM55B-204ENST00000553602 TRA2BP62995 288 aaKnown RBP4.99□□□□□ -1.61
TMEM55B-204ENST00000553602 PPP3R1P63098 170 aa4.99□□□□□ -1.61
TMEM55B-204ENST00000553602 EFNB1P98172 346 aa4.99□□□□□ -1.61
TMEM55B-204ENST00000553602 BDH1Q02338 343 aa4.99□□□□□ -1.61
TMEM55B-204ENST00000553602 FPGSQ05932 587 aa4.99□□□□□ -1.61
TMEM55B-204ENST00000553602 C19orf57Q0VDD7 668 aa4.99□□□□□ -1.61
TMEM55B-204ENST00000553602 RAB40BQ12829 278 aa4.99□□□□□ -1.61
TMEM55B-204ENST00000553602 HYAL2Q12891 473 aa4.99□□□□□ -1.61
TMEM55B-204ENST00000553602 RPA4Q13156 261 aa4.99□□□□□ -1.61
TMEM55B-204ENST00000553602 IKZF1Q13422 519 aa4.99□□□□□ -1.61
TMEM55B-204ENST00000553602 DDX39BQ13838 428 aaKnown RBP4.99□□□□□ -1.61
TMEM55B-204ENST00000553602 GNA13Q14344 377 aa4.99□□□□□ -1.61
TMEM55B-204ENST00000553602 SLBPQ14493 270 aaKnown RBP eCLIP4.99□□□□□ -1.61
TMEM55B-204ENST00000553602 ARHGAP19Q14CB8 494 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms