RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 SPIN4Q56A73 249 aa14.27□□□□□ -0.13
SHMT2-204ENST00000553324 ZNF324BQ6AW86 544 aaPredicted RBP14.27□□□□□ -0.13
SHMT2-204ENST00000553324 BANPQ8N9N5 519 aa14.27□□□□□ -0.13
SHMT2-204ENST00000553324 OR4K14Q8NGD5 310 aa14.27□□□□□ -0.13
SHMT2-204ENST00000553324 PRR7Q8TB68 274 aa14.27□□□□□ -0.13
SHMT2-204ENST00000553324 AGAP11Q8TF27 550 aa14.27□□□□□ -0.13
SHMT2-204ENST00000553324 THAP3Q8WTV1 239 aaPredicted RBP14.27□□□□□ -0.13
SHMT2-204ENST00000553324 CHTF18Q8WVB6 975 aa14.27□□□□□ -0.13
SHMT2-204ENST00000553324 SREK1Q8WXA9 508 aaKnown RBP14.27□□□□□ -0.13
SHMT2-204ENST00000553324 NR4A3Q92570 626 aa14.27□□□□□ -0.13
SHMT2-204ENST00000553324 RIT1Q92963 219 aa14.27□□□□□ -0.13
SHMT2-204ENST00000553324 APOPT1Q96IL0 206 aa14.27□□□□□ -0.13
SHMT2-204ENST00000553324 SMC6Q96SB8 1091 aa14.27□□□□□ -0.13
SHMT2-204ENST00000553324 TRMOQ9BU70 441 aa14.27□□□□□ -0.13
SHMT2-204ENST00000553324 FAIM2Q9BWQ8 316 aa14.27□□□□□ -0.13
SHMT2-204ENST00000553324 SENP1Q9P0U3 644 aa14.27□□□□□ -0.13
SHMT2-204ENST00000553324 ZNF223Q9UK11 482 aaPredicted RBP14.27□□□□□ -0.13
SHMT2-204ENST00000553324 MYOCOSA0A1B0GUC4 107 aa14.26□□□□□ -0.13
SHMT2-204ENST00000553324 CLEC18AA5D8T8 446 aa14.26□□□□□ -0.13
SHMT2-204ENST00000553324 GLOD5A6NK44 160 aa14.26□□□□□ -0.13
SHMT2-204ENST00000553324 PGRMC2O15173 223 aa14.26□□□□□ -0.13
SHMT2-204ENST00000553324 TRIM13O60858 407 aa14.26□□□□□ -0.13
SHMT2-204ENST00000553324 SLC25A12O75746 678 aa14.26□□□□□ -0.13
SHMT2-204ENST00000553324 DEKP35659 375 aaKnown RBP14.26□□□□□ -0.13
SHMT2-204ENST00000553324 GSTM5P46439 218 aa14.26□□□□□ -0.13
SHMT2-204ENST00000553324 RNF4P78317 190 aa14.26□□□□□ -0.13
SHMT2-204ENST00000553324 GALNT1Q10472 559 aaPredicted RBP14.26□□□□□ -0.13
SHMT2-204ENST00000553324 MRPL49Q13405 166 aaKnown RBP14.26□□□□□ -0.13
SHMT2-204ENST00000553324 SPRED3Q2MJR0 410 aa14.26□□□□□ -0.13
SHMT2-204ENST00000553324 CLEC18BQ6UXF7 455 aa14.26□□□□□ -0.13
SHMT2-204ENST00000553324 FRMD7Q6ZUT3 714 aa14.26□□□□□ -0.13
SHMT2-204ENST00000553324 CROCCP2Q86T23 111 aa14.26□□□□□ -0.13
SHMT2-204ENST00000553324 SRRM1Q8IYB3 904 aaKnown RBP14.26□□□□□ -0.13
SHMT2-204ENST00000553324 CLEC18CQ8NCF0 446 aa14.26□□□□□ -0.13
SHMT2-204ENST00000553324 NUBPLQ8TB37 319 aa14.26□□□□□ -0.13
SHMT2-204ENST00000553324 ZNF721Q8TF20 911 aa14.26□□□□□ -0.13
SHMT2-204ENST00000553324 PPWD1Q96BP3 646 aaKnown RBP14.26□□□□□ -0.13
SHMT2-204ENST00000553324 FBXL20Q96IG2 436 aa14.26□□□□□ -0.13
SHMT2-204ENST00000553324 TAAR6Q96RI8 345 aa14.26□□□□□ -0.13
SHMT2-204ENST00000553324 SLX1AQ9BQ83 275 aa14.26□□□□□ -0.13
SHMT2-204ENST00000553324 KLHL1Q9NR64 748 aa14.26□□□□□ -0.13
SHMT2-204ENST00000553324 MCM8Q9UJA3 840 aa14.26□□□□□ -0.13
SHMT2-204ENST00000553324 ASPDHA6ND91 283 aa14.25□□□□□ -0.13
SHMT2-204ENST00000553324 GOLGA6L10A6NI86 522 aa14.25□□□□□ -0.13
SHMT2-204ENST00000553324 OR6C76A6NM76 312 aa14.25□□□□□ -0.13
SHMT2-204ENST00000553324 A8MVJ9 347 aa14.25□□□□□ -0.13
SHMT2-204ENST00000553324 KLRC4-KLRK1H3BQV0 150 aa14.25□□□□□ -0.13
SHMT2-204ENST00000553324 ZIC2O95409 532 aaPredicted RBP14.25□□□□□ -0.13
SHMT2-204ENST00000553324 IGKV3-11P04433 115 aa14.25□□□□□ -0.13
SHMT2-204ENST00000553324 UROSP10746 265 aa14.25□□□□□ -0.13
SHMT2-204ENST00000553324 XKP51811 444 aa14.25□□□□□ -0.13
SHMT2-204ENST00000553324 ACSM2AQ08AH3 577 aa14.25□□□□□ -0.13
SHMT2-204ENST00000553324 MPEG1Q2M385 716 aa14.25□□□□□ -0.13
SHMT2-204ENST00000553324 KRTCAP3Q53RY4 240 aa14.25□□□□□ -0.13
SHMT2-204ENST00000553324 C6orf163Q5TEZ5 329 aa14.25□□□□□ -0.13
SHMT2-204ENST00000553324 ZNF468Q5VIY5 522 aaPredicted RBP14.25□□□□□ -0.13
SHMT2-204ENST00000553324 ACSM2BQ68CK6 577 aa14.25□□□□□ -0.13
SHMT2-204ENST00000553324 C10orf107Q8IVU9 208 aa14.25□□□□□ -0.13
SHMT2-204ENST00000553324 CYP4Z2PQ8N1L4 340 aa14.25□□□□□ -0.13
SHMT2-204ENST00000553324 C1orf52Q8N6N3 182 aaKnown RBP14.25□□□□□ -0.13
SHMT2-204ENST00000553324 POGLUT1Q8NBL1 392 aa14.25□□□□□ -0.13
SHMT2-204ENST00000553324 ASB15Q8WXK1 588 aa14.25□□□□□ -0.13
SHMT2-204ENST00000553324 TM4SF18Q96CE8 201 aa14.25□□□□□ -0.13
SHMT2-204ENST00000553324 HPF1Q9NWY4 346 aa14.25□□□□□ -0.13
SHMT2-204ENST00000553324 SIRT5Q9NXA8 310 aa14.25□□□□□ -0.13
SHMT2-204ENST00000553324 TEX10Q9NXF1 929 aaPredicted RBP14.25□□□□□ -0.13
SHMT2-204ENST00000553324 ERVK-11Q9UQG0 969 aa14.25□□□□□ -0.13
SHMT2-204ENST00000553324 KLF13Q9Y2Y9 288 aaPredicted RBP14.25□□□□□ -0.13
SHMT2-204ENST00000553324 TIMM22Q9Y584 194 aa14.25□□□□□ -0.13
SHMT2-204ENST00000553324 PCDHA9Q9Y5H5 950 aa14.25□□□□□ -0.13
SHMT2-204ENST00000553324 TMEM200CA6NKL6 621 aa14.24□□□□□ -0.13
SHMT2-204ENST00000553324 UBFD1O14562 309 aaKnown RBP14.24□□□□□ -0.13
SHMT2-204ENST00000553324 NME2P1O60361 137 aa14.24□□□□□ -0.13
SHMT2-204ENST00000553324 PRKRAO75569 313 aaKnown RBP14.24□□□□□ -0.13
SHMT2-204ENST00000553324 OR2J2O76002 312 aa14.24□□□□□ -0.13
SHMT2-204ENST00000553324 AGFG2O95081 481 aa14.24□□□□□ -0.13
SHMT2-204ENST00000553324 DRD2P14416 443 aa14.24□□□□□ -0.13
SHMT2-204ENST00000553324 PORP16435 677 aaPredicted RBP14.24□□□□□ -0.13
SHMT2-204ENST00000553324 NME2P22392 152 aa14.24□□□□□ -0.13
SHMT2-204ENST00000553324 ZNF267Q14586 743 aaPredicted RBP14.24□□□□□ -0.13
SHMT2-204ENST00000553324 HEPACAMQ14CZ8 416 aa14.24□□□□□ -0.13
SHMT2-204ENST00000553324 IMPG1Q17R60 797 aa14.24□□□□□ -0.13
SHMT2-204ENST00000553324 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.24□□□□□ -0.13
SHMT2-204ENST00000553324 TCHHL1Q5QJ38 904 aaPredicted RBP14.24□□□□□ -0.13
SHMT2-204ENST00000553324 SLC48A1Q6P1K1 146 aa14.24□□□□□ -0.13
SHMT2-204ENST00000553324 GALNT18Q6P9A2 607 aa14.24□□□□□ -0.13
SHMT2-204ENST00000553324 OPN5Q6U736 354 aa14.24□□□□□ -0.13
SHMT2-204ENST00000553324 SLC29A4Q7RTT9 530 aa14.24□□□□□ -0.13
SHMT2-204ENST00000553324 TRIM46Q7Z4K8 759 aa14.24□□□□□ -0.13
SHMT2-204ENST00000553324 GALNTL5Q7Z4T8 443 aa14.24□□□□□ -0.13
SHMT2-204ENST00000553324 SAMD14Q8IZD0 417 aaPredicted RBP14.24□□□□□ -0.13
SHMT2-204ENST00000553324 SLC15A4Q8N697 577 aa14.24□□□□□ -0.13
SHMT2-204ENST00000553324 FAM76AQ8TAV0 307 aa14.24□□□□□ -0.13
SHMT2-204ENST00000553324 METTL2AQ96IZ6 378 aaKnown RBP14.24□□□□□ -0.13
SHMT2-204ENST00000553324 SGCZQ96LD1 299 aa14.24□□□□□ -0.13
SHMT2-204ENST00000553324 RASL10BQ96S79 203 aa14.24□□□□□ -0.13
SHMT2-204ENST00000553324 HBEGFQ99075 208 aa14.24□□□□□ -0.13
SHMT2-204ENST00000553324 ACPTQ9BZG2 426 aa14.24□□□□□ -0.13
SHMT2-204ENST00000553324 EML4Q9HC35 981 aaKnown RBP14.24□□□□□ -0.13
SHMT2-204ENST00000553324 TIMMDC1Q9NPL8 285 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms