RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 YAE1D1Q9NRH1 226 aa4.34□□□□□ -1.71
SCFD1-209ENST00000553280 AATFQ9NY61 560 aaKnown RBP eCLIP4.34□□□□□ -1.71
SCFD1-209ENST00000553280 TBK1Q9UHD2 729 aa4.34□□□□□ -1.71
SCFD1-209ENST00000553280 BCAP29Q9UHQ4 241 aa4.34□□□□□ -1.71
SCFD1-209ENST00000553280 FAM72CH0Y354 149 aa4.33□□□□□ -1.72
SCFD1-209ENST00000553280 LGALS8O00214 317 aa4.33□□□□□ -1.72
SCFD1-209ENST00000553280 TLX2O43763 284 aaPredicted RBP4.33□□□□□ -1.72
SCFD1-209ENST00000553280 LANCL1O43813 399 aa4.33□□□□□ -1.72
SCFD1-209ENST00000553280 CSO75390 466 aaKnown RBP4.33□□□□□ -1.72
SCFD1-209ENST00000553280 KRT13P13646 458 aa4.33□□□□□ -1.72
SCFD1-209ENST00000553280 ANOS1P23352 680 aa4.33□□□□□ -1.72
SCFD1-209ENST00000553280 TMOD1P28289 359 aa4.33□□□□□ -1.72
SCFD1-209ENST00000553280 SOX6P35712 828 aa4.33□□□□□ -1.72
SCFD1-209ENST00000553280 PRPHP41219 470 aa4.33□□□□□ -1.72
SCFD1-209ENST00000553280 TSFMP43897 325 aaKnown RBP4.33□□□□□ -1.72
SCFD1-209ENST00000553280 NPY2RP49146 381 aa4.33□□□□□ -1.72
SCFD1-209ENST00000553280 RAPSNQ13702 412 aa4.33□□□□□ -1.72
SCFD1-209ENST00000553280 ADPRMQ3LIE5 342 aa4.33□□□□□ -1.72
SCFD1-209ENST00000553280 FAM72AQ5TYM5 149 aa4.33□□□□□ -1.72
SCFD1-209ENST00000553280 FAM72DQ6L9T8 149 aa4.33□□□□□ -1.72
SCFD1-209ENST00000553280 FIP1L1Q6UN15 594 aaKnown RBP4.33□□□□□ -1.72
SCFD1-209ENST00000553280 CWC27Q6UX04 472 aaKnown RBP4.33□□□□□ -1.72
SCFD1-209ENST00000553280 Q71RC1 249 aaPredicted RBP4.33□□□□□ -1.72
SCFD1-209ENST00000553280 ARMCX2Q7L311 632 aa4.33□□□□□ -1.72
SCFD1-209ENST00000553280 FAM72BQ86X60 149 aa4.33□□□□□ -1.72
SCFD1-209ENST00000553280 OR4N5Q8IXE1 308 aa4.33□□□□□ -1.72
SCFD1-209ENST00000553280 GVQW1Q8N7I0 195 aa4.33□□□□□ -1.72
SCFD1-209ENST00000553280 FBXO30Q8TB52 745 aa4.33□□□□□ -1.72
SCFD1-209ENST00000553280 LIPHQ8WWY8 451 aa4.33□□□□□ -1.72
SCFD1-209ENST00000553280 CCDC51Q96ER9 411 aa4.33□□□□□ -1.72
SCFD1-209ENST00000553280 COG3Q96JB2 828 aa4.33□□□□□ -1.72
SCFD1-209ENST00000553280 MAGED4Q96JG8 741 aa4.33□□□□□ -1.72
SCFD1-209ENST00000553280 ACCSQ96QU6 501 aa4.33□□□□□ -1.72
SCFD1-209ENST00000553280 TPPP3Q9BW30 176 aa4.33□□□□□ -1.72
SCFD1-209ENST00000553280 RAB11FIP5Q9BXF6 653 aa4.33□□□□□ -1.72
SCFD1-209ENST00000553280 KRTAP2-2Q9BYT5 123 aa4.33□□□□□ -1.72
SCFD1-209ENST00000553280 CENPMQ9NSP4 180 aa4.33□□□□□ -1.72
SCFD1-209ENST00000553280 GTSE1Q9NYZ3 720 aa4.33□□□□□ -1.72
SCFD1-209ENST00000553280 WWOXQ9NZC7 414 aa4.33□□□□□ -1.72
SCFD1-209ENST00000553280 KLK11Q9UBX7 282 aa4.33□□□□□ -1.72
SCFD1-209ENST00000553280 MIOXQ9UGB7 285 aa4.33□□□□□ -1.72
SCFD1-209ENST00000553280 ZNF490Q9ULM2 529 aaPredicted RBP4.33□□□□□ -1.72
SCFD1-209ENST00000553280 DUSP12Q9UNI6 340 aa4.33□□□□□ -1.72
SCFD1-209ENST00000553280 TCF19Q9Y242 345 aa4.33□□□□□ -1.72
SCFD1-209ENST00000553280 KLHDC2Q9Y2U9 406 aa4.33□□□□□ -1.72
SCFD1-209ENST00000553280 MFHAS1Q9Y4C4 1052 aa4.33□□□□□ -1.72
SCFD1-209ENST00000553280 ANGPTL3Q9Y5C1 460 aa4.33□□□□□ -1.72
SCFD1-209ENST00000553280 RNF215Q9Y6U7 377 aa4.33□□□□□ -1.72
SCFD1-209ENST00000553280 DOCK7Q96N67 2140 aa4.33□□□□□ -1.72
SCFD1-209ENST00000553280 A0A0U1RQV5 110 aa4.32□□□□□ -1.72
SCFD1-209ENST00000553280 A0A1B0GUL7 405 aa4.32□□□□□ -1.72
SCFD1-209ENST00000553280 IQCMA0A1B0GVH7 501 aa4.32□□□□□ -1.72
SCFD1-209ENST00000553280 ANKRD30BLA7E2S9 258 aa4.32□□□□□ -1.72
SCFD1-209ENST00000553280 E9PMD0 336 aa4.32□□□□□ -1.72
SCFD1-209ENST00000553280 SGK494L7N484 410 aa4.32□□□□□ -1.72
SCFD1-209ENST00000553280 PDXKO00764 312 aa4.32□□□□□ -1.72
SCFD1-209ENST00000553280 TSPAN2O60636 221 aa4.32□□□□□ -1.72
SCFD1-209ENST00000553280 IDH1O75874 414 aaKnown RBP4.32□□□□□ -1.72
SCFD1-209ENST00000553280 IGHEP01854 428 aa4.32□□□□□ -1.72
SCFD1-209ENST00000553280 FCER2P06734 321 aa4.32□□□□□ -1.72
SCFD1-209ENST00000553280 PATE4P0C8F1 98 aa4.32□□□□□ -1.72
SCFD1-209ENST00000553280 CALCBP10092 127 aa4.32□□□□□ -1.72
SCFD1-209ENST00000553280 MBL2P11226 248 aaPredicted RBP4.32□□□□□ -1.72
SCFD1-209ENST00000553280 GNB3P16520 340 aa4.32□□□□□ -1.72
SCFD1-209ENST00000553280 PTPN6P29350 595 aa4.32□□□□□ -1.72
SCFD1-209ENST00000553280 FCGR2BP31994 310 aaPredicted RBP4.32□□□□□ -1.72
SCFD1-209ENST00000553280 IFNAR2P48551 515 aa4.32□□□□□ -1.72
SCFD1-209ENST00000553280 NDST1P52848 882 aa4.32□□□□□ -1.72
SCFD1-209ENST00000553280 ARFIP1P53367 373 aa4.32□□□□□ -1.72
SCFD1-209ENST00000553280 OVGP1Q12889 678 aa4.32□□□□□ -1.72
SCFD1-209ENST00000553280 HNRNPDQ14103 355 aaKnown RBP4.32□□□□□ -1.72
SCFD1-209ENST00000553280 MTF1Q14872 753 aa4.32□□□□□ -1.72
SCFD1-209ENST00000553280 P2RY14Q15391 338 aa4.32□□□□□ -1.72
SCFD1-209ENST00000553280 Q6ZRG5 221 aa4.32□□□□□ -1.72
SCFD1-209ENST00000553280 GOLGA7Q7Z5G4 137 aa4.32□□□□□ -1.72
SCFD1-209ENST00000553280 VPS36Q86VN1 386 aa4.32□□□□□ -1.72
SCFD1-209ENST00000553280 DCUN1D3Q8IWE4 304 aa4.32□□□□□ -1.72
SCFD1-209ENST00000553280 ZNF397Q8NF99 534 aaPredicted RBP4.32□□□□□ -1.72
SCFD1-209ENST00000553280 RPLP0P6Q8NHW5 317 aa4.32□□□□□ -1.72
SCFD1-209ENST00000553280 RDH11Q8TC12 318 aa4.32□□□□□ -1.72
SCFD1-209ENST00000553280 MRGPRDQ8TDS7 321 aa4.32□□□□□ -1.72
SCFD1-209ENST00000553280 MRPL24Q96A35 216 aaKnown RBP4.32□□□□□ -1.72
SCFD1-209ENST00000553280 CAPNS2Q96L46 248 aa4.32□□□□□ -1.72
SCFD1-209ENST00000553280 TXN2Q99757 166 aa4.32□□□□□ -1.72
SCFD1-209ENST00000553280 CRACR2AQ9BSW2 395 aa4.32□□□□□ -1.72
SCFD1-209ENST00000553280 WRAP53Q9BUR4 548 aaKnown RBP4.32□□□□□ -1.72
SCFD1-209ENST00000553280 NT5C3AQ9H0P0 336 aa4.32□□□□□ -1.72
SCFD1-209ENST00000553280 LNPEPQ9UIQ6 1025 aa4.32□□□□□ -1.72
SCFD1-209ENST00000553280 PPP1R3CQ9UQK1 317 aa4.32□□□□□ -1.72
SCFD1-209ENST00000553280 CHMP2BQ9UQN3 213 aa4.32□□□□□ -1.72
SCFD1-209ENST00000553280 ZNF175Q9Y473 711 aa4.32□□□□□ -1.72
SCFD1-209ENST00000553280 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.32□□□□□ -1.72
SCFD1-209ENST00000553280 ZHX2Q9Y6X8 837 aa4.32□□□□□ -1.72
SCFD1-209ENST00000553280 OR5H15A6NDH6 313 aa4.31□□□□□ -1.72
SCFD1-209ENST00000553280 A8MU76 341 aa4.31□□□□□ -1.72
SCFD1-209ENST00000553280 MEI4A8MW99 385 aa4.31□□□□□ -1.72
SCFD1-209ENST00000553280 SH2D1BO14796 132 aa4.31□□□□□ -1.72
SCFD1-209ENST00000553280 TNFSF12O43508 249 aa4.31□□□□□ -1.72
SCFD1-209ENST00000553280 BUB1O43683 1085 aa4.31□□□□□ -1.72
SCFD1-209ENST00000553280 MAGEC1O60732 1142 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms