RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 ABHD17BQ5VST6 288 aa10.93□□□□□ -0.66
TRAFD1-209ENST00000552896 ATG14Q6ZNE5 492 aa10.93□□□□□ -0.66
TRAFD1-209ENST00000552896 IKBIPQ70UQ0 350 aa10.93□□□□□ -0.66
TRAFD1-209ENST00000552896 PTRH1Q86Y79 214 aaKnown RBP10.93□□□□□ -0.66
TRAFD1-209ENST00000552896 DDIASQ8IXT1 998 aa10.93□□□□□ -0.66
TRAFD1-209ENST00000552896 ARMC10Q8N2F6 343 aa10.93□□□□□ -0.66
TRAFD1-209ENST00000552896 ZADH2Q8N4Q0 377 aa10.93□□□□□ -0.66
TRAFD1-209ENST00000552896 RBMXL3Q8N7X1 1067 aaKnown RBP10.93□□□□□ -0.66
TRAFD1-209ENST00000552896 GOLGA6L1Q8N7Z2 621 aa10.93□□□□□ -0.66
TRAFD1-209ENST00000552896 TEX19Q8NA77 164 aa10.93□□□□□ -0.66
TRAFD1-209ENST00000552896 OR2T11Q8NH01 316 aa10.93□□□□□ -0.66
TRAFD1-209ENST00000552896 AGR3Q8TD06 166 aa10.93□□□□□ -0.66
TRAFD1-209ENST00000552896 PTPMT1Q8WUK0 201 aaPredicted RBP10.93□□□□□ -0.66
TRAFD1-209ENST00000552896 NCLNQ969V3 563 aa10.93□□□□□ -0.66
TRAFD1-209ENST00000552896 PNPLA2Q96AD5 504 aa10.93□□□□□ -0.66
TRAFD1-209ENST00000552896 ARL8AQ96BM9 186 aa10.93□□□□□ -0.66
TRAFD1-209ENST00000552896 TM4SF18Q96CE8 201 aa10.93□□□□□ -0.66
TRAFD1-209ENST00000552896 ART5Q96L15 291 aa10.93□□□□□ -0.66
TRAFD1-209ENST00000552896 FCRL1Q96LA6 429 aa10.93□□□□□ -0.66
TRAFD1-209ENST00000552896 CCT7Q99832 543 aa10.93□□□□□ -0.66
TRAFD1-209ENST00000552896 EBPLQ9BY08 206 aa10.93□□□□□ -0.66
TRAFD1-209ENST00000552896 MYNNQ9NPC7 610 aa10.93□□□□□ -0.66
TRAFD1-209ENST00000552896 C1orf109Q9NX04 203 aa10.93□□□□□ -0.66
TRAFD1-209ENST00000552896 HAO1Q9UJM8 370 aa10.93□□□□□ -0.66
TRAFD1-209ENST00000552896 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.93□□□□□ -0.66
TRAFD1-209ENST00000552896 TMED5Q9Y3A6 229 aa10.93□□□□□ -0.66
TRAFD1-209ENST00000552896 EML6Q6ZMW3 1958 aa10.93□□□□□ -0.66
TRAFD1-209ENST00000552896 TRBV11-1A0A0K0K1C0 115 aa10.92□□□□□ -0.66
TRAFD1-209ENST00000552896 DYTNA2CJ06 578 aa10.92□□□□□ -0.66
TRAFD1-209ENST00000552896 HMGB1P1B2RPK0 211 aaPredicted RBP10.92□□□□□ -0.66
TRAFD1-209ENST00000552896 CDK2AP1O14519 115 aa10.92□□□□□ -0.66
TRAFD1-209ENST00000552896 LSM1O15116 133 aaKnown RBP10.92□□□□□ -0.66
TRAFD1-209ENST00000552896 PGRMC2O15173 223 aa10.92□□□□□ -0.66
TRAFD1-209ENST00000552896 SUV39H1O43463 412 aa10.92□□□□□ -0.66
TRAFD1-209ENST00000552896 ITM2AO43736 263 aa10.92□□□□□ -0.66
TRAFD1-209ENST00000552896 OR10H2O60403 315 aa10.92□□□□□ -0.66
TRAFD1-209ENST00000552896 LYPLA1O75608 230 aaPredicted RBP10.92□□□□□ -0.66
TRAFD1-209ENST00000552896 SORBS2O94875 1100 aaKnown RBP10.92□□□□□ -0.66
TRAFD1-209ENST00000552896 DDAH2O95865 285 aa10.92□□□□□ -0.66
TRAFD1-209ENST00000552896 IL3P08700 152 aa10.92□□□□□ -0.66
TRAFD1-209ENST00000552896 ANXA4P09525 319 aaPredicted RBP10.92□□□□□ -0.66
TRAFD1-209ENST00000552896 LINC00032P0C843 101 aa10.92□□□□□ -0.66
TRAFD1-209ENST00000552896 SLC35E2P0CK97 266 aa10.92□□□□□ -0.66
TRAFD1-209ENST00000552896 DRD2P14416 443 aa10.92□□□□□ -0.66
TRAFD1-209ENST00000552896 CASRP41180 1078 aa10.92□□□□□ -0.66
TRAFD1-209ENST00000552896 SLC1A6P48664 564 aa10.92□□□□□ -0.66
TRAFD1-209ENST00000552896 CLCN2P51788 898 aa10.92□□□□□ -0.66
TRAFD1-209ENST00000552896 GPR143P51810 404 aa10.92□□□□□ -0.66
TRAFD1-209ENST00000552896 BTKQ06187 659 aa10.92□□□□□ -0.66
TRAFD1-209ENST00000552896 HEPACAMQ14CZ8 416 aa10.92□□□□□ -0.66
TRAFD1-209ENST00000552896 ACER2Q5QJU3 275 aa10.92□□□□□ -0.66
TRAFD1-209ENST00000552896 B3GNTL1Q67FW5 361 aaPredicted RBP10.92□□□□□ -0.66
TRAFD1-209ENST00000552896 SLC6A19Q695T7 634 aa10.92□□□□□ -0.66
TRAFD1-209ENST00000552896 LINC00696Q6ZRV3 163 aa10.92□□□□□ -0.66
TRAFD1-209ENST00000552896 CRLF3Q8IUI8 442 aa10.92□□□□□ -0.66
TRAFD1-209ENST00000552896 OR4N5Q8IXE1 308 aa10.92□□□□□ -0.66
TRAFD1-209ENST00000552896 KIF2BQ8N4N8 673 aa10.92□□□□□ -0.66
TRAFD1-209ENST00000552896 OR4K14Q8NGD5 310 aa10.92□□□□□ -0.66
TRAFD1-209ENST00000552896 SLC2A12Q8TD20 617 aa10.92□□□□□ -0.66
TRAFD1-209ENST00000552896 MGARPQ8TDB4 240 aa10.92□□□□□ -0.66
TRAFD1-209ENST00000552896 C16orf78Q8WTQ4 265 aa10.92□□□□□ -0.66
TRAFD1-209ENST00000552896 KLHL29Q96CT2 875 aa10.92□□□□□ -0.66
TRAFD1-209ENST00000552896 FBXL20Q96IG2 436 aa10.92□□□□□ -0.66
TRAFD1-209ENST00000552896 ZNF354BQ96LW1 612 aa10.92□□□□□ -0.66
TRAFD1-209ENST00000552896 SORT1Q99523 831 aa10.92□□□□□ -0.66
TRAFD1-209ENST00000552896 PAIP2Q9BPZ3 127 aaKnown RBP10.92□□□□□ -0.66
TRAFD1-209ENST00000552896 ACBD3Q9H3P7 528 aa10.92□□□□□ -0.66
TRAFD1-209ENST00000552896 LRTM1Q9HBL6 345 aa10.92□□□□□ -0.66
TRAFD1-209ENST00000552896 ZBTB20Q9HC78 741 aaPredicted RBP10.92□□□□□ -0.66
TRAFD1-209ENST00000552896 PFDN4Q9NQP4 134 aa10.92□□□□□ -0.66
TRAFD1-209ENST00000552896 EHD3Q9NZN3 535 aa10.92□□□□□ -0.66
TRAFD1-209ENST00000552896 ABI3Q9P2A4 366 aa10.92□□□□□ -0.66
TRAFD1-209ENST00000552896 COPS7AQ9UBW8 275 aa10.92□□□□□ -0.66
TRAFD1-209ENST00000552896 ZDHHC2Q9UIJ5 367 aa10.92□□□□□ -0.66
TRAFD1-209ENST00000552896 ZNF223Q9UK11 482 aaPredicted RBP10.92□□□□□ -0.66
TRAFD1-209ENST00000552896 CES1P1Q9UKY3 287 aa10.92□□□□□ -0.66
TRAFD1-209ENST00000552896 B3GNT3Q9Y2A9 372 aa10.92□□□□□ -0.66
TRAFD1-209ENST00000552896 DLGAP4Q9Y2H0 992 aa10.92□□□□□ -0.66
TRAFD1-209ENST00000552896 WBP11Q9Y2W2 641 aaKnown RBP10.92□□□□□ -0.66
TRAFD1-209ENST00000552896 RAP2CQ9Y3L5 183 aa10.92□□□□□ -0.66
TRAFD1-209ENST00000552896 NBASA2RRP1 2371 aa10.91□□□□□ -0.66
TRAFD1-209ENST00000552896 GCN1Q92616 2671 aaKnown RBP10.91□□□□□ -0.66
TRAFD1-209ENST00000552896 MYOCOSA0A1B0GUC4 107 aa10.91□□□□□ -0.66
TRAFD1-209ENST00000552896 SEC22BO75396 215 aa10.91□□□□□ -0.66
TRAFD1-209ENST00000552896 SKAP2O75563 359 aaPredicted RBP10.91□□□□□ -0.66
TRAFD1-209ENST00000552896 SASH3O75995 380 aa10.91□□□□□ -0.66
TRAFD1-209ENST00000552896 IGKV3-11P04433 115 aa10.91□□□□□ -0.66
TRAFD1-209ENST00000552896 ATP1B1P05026 303 aa10.91□□□□□ -0.66
TRAFD1-209ENST00000552896 CPMP14384 443 aa10.91□□□□□ -0.66
TRAFD1-209ENST00000552896 ALDH9A1P49189 494 aa10.91□□□□□ -0.66
TRAFD1-209ENST00000552896 RPL38P63173 70 aaKnown RBP10.91□□□□□ -0.66
TRAFD1-209ENST00000552896 BST1Q10588 318 aa10.91□□□□□ -0.66
TRAFD1-209ENST00000552896 STX3Q13277 289 aa10.91□□□□□ -0.66
TRAFD1-209ENST00000552896 KIAA0040Q15053 153 aa10.91□□□□□ -0.66
TRAFD1-209ENST00000552896 MEP1AQ16819 746 aa10.91□□□□□ -0.66
TRAFD1-209ENST00000552896 NADK2Q4G0N4 442 aa10.91□□□□□ -0.66
TRAFD1-209ENST00000552896 NOXRED1Q6NXP6 359 aa10.91□□□□□ -0.66
TRAFD1-209ENST00000552896 Q6ZS92 163 aa10.91□□□□□ -0.66
TRAFD1-209ENST00000552896 Q6ZSR9 355 aa10.91□□□□□ -0.66
TRAFD1-209ENST00000552896 TRIM42Q8IWZ5 723 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms