RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 DCAF7P61962 342 aa9.6□□□□□ -0.87
TRAFD1-208ENST00000552890 RPP38P78345 283 aaKnown RBP9.6□□□□□ -0.87
TRAFD1-208ENST00000552890 ARG2P78540 354 aa9.6□□□□□ -0.87
TRAFD1-208ENST00000552890 BTG2P78543 158 aa9.6□□□□□ -0.87
TRAFD1-208ENST00000552890 LRRC74AQ0VAA2 488 aa9.6□□□□□ -0.87
TRAFD1-208ENST00000552890 HLA-DQA1Q5Y7H0 255 aa9.6□□□□□ -0.87
TRAFD1-208ENST00000552890 ADNP2Q6IQ32 1131 aa9.6□□□□□ -0.87
TRAFD1-208ENST00000552890 ATG14Q6ZNE5 492 aa9.6□□□□□ -0.87
TRAFD1-208ENST00000552890 RPS19BP1Q86WX3 136 aaKnown RBP9.6□□□□□ -0.87
TRAFD1-208ENST00000552890 GALNT12Q8IXK2 581 aa9.6□□□□□ -0.87
TRAFD1-208ENST00000552890 TAGAPQ8N103 731 aa9.6□□□□□ -0.87
TRAFD1-208ENST00000552890 ARMC10Q8N2F6 343 aa9.6□□□□□ -0.87
TRAFD1-208ENST00000552890 LRRC25Q8N386 305 aaPredicted RBP9.6□□□□□ -0.87
TRAFD1-208ENST00000552890 DTWD1Q8N5C7 304 aa9.6□□□□□ -0.87
TRAFD1-208ENST00000552890 FAM98AQ8NCA5 519 aaKnown RBP9.6□□□□□ -0.87
TRAFD1-208ENST00000552890 VPS37AQ8NEZ2 397 aa9.6□□□□□ -0.87
TRAFD1-208ENST00000552890 OR1N1Q8NGS0 311 aa9.6□□□□□ -0.87
TRAFD1-208ENST00000552890 NUBPLQ8TB37 319 aa9.6□□□□□ -0.87
TRAFD1-208ENST00000552890 DNAJB14Q8TBM8 379 aa9.6□□□□□ -0.87
TRAFD1-208ENST00000552890 PNPLA2Q96AD5 504 aa9.6□□□□□ -0.87
TRAFD1-208ENST00000552890 KLHL29Q96CT2 875 aa9.6□□□□□ -0.87
TRAFD1-208ENST00000552890 TUBGCP3Q96CW5 907 aa9.6□□□□□ -0.87
TRAFD1-208ENST00000552890 C19orf60Q96EN9 201 aa9.6□□□□□ -0.87
TRAFD1-208ENST00000552890 C11orf24Q96F05 449 aaPredicted RBP9.6□□□□□ -0.87
TRAFD1-208ENST00000552890 CRELD1Q96HD1 420 aa9.6□□□□□ -0.87
TRAFD1-208ENST00000552890 UTP23Q9BRU9 249 aaKnown RBP9.6□□□□□ -0.87
TRAFD1-208ENST00000552890 SIKE1Q9BRV8 207 aa9.6□□□□□ -0.87
TRAFD1-208ENST00000552890 RBCK1Q9BYM8 510 aa9.6□□□□□ -0.87
TRAFD1-208ENST00000552890 SEMA4CQ9C0C4 833 aa9.6□□□□□ -0.87
TRAFD1-208ENST00000552890 ZNF552Q9H707 407 aaPredicted RBP9.6□□□□□ -0.87
TRAFD1-208ENST00000552890 NOP53Q9NZM5 478 aaKnown RBP9.6□□□□□ -0.87
TRAFD1-208ENST00000552890 PRODH2Q9UF12 536 aa9.6□□□□□ -0.87
TRAFD1-208ENST00000552890 UTS2RQ9UKP6 389 aa9.6□□□□□ -0.87
TRAFD1-208ENST00000552890 DLGAP4Q9Y2H0 992 aa9.6□□□□□ -0.87
TRAFD1-208ENST00000552890 YARS2Q9Y2Z4 477 aaKnown RBP9.6□□□□□ -0.87
TRAFD1-208ENST00000552890 CCDC88CQ9P219 2028 aa9.6□□□□□ -0.87
TRAFD1-208ENST00000552890 CFAP47Q6ZTR5 3102 aa9.59□□□□□ -0.87
TRAFD1-208ENST00000552890 UQCRHLA0A096LP55 91 aa9.59□□□□□ -0.87
TRAFD1-208ENST00000552890 HDAC3O15379 428 aa9.59□□□□□ -0.87
TRAFD1-208ENST00000552890 TBX19O60806 448 aa9.59□□□□□ -0.87
TRAFD1-208ENST00000552890 B3GALT4O96024 378 aa9.59□□□□□ -0.87
TRAFD1-208ENST00000552890 LINC00032P0C843 101 aa9.59□□□□□ -0.87
TRAFD1-208ENST00000552890 CD46P15529 392 aa9.59□□□□□ -0.87
TRAFD1-208ENST00000552890 CREB1P16220 341 aa9.59□□□□□ -0.87
TRAFD1-208ENST00000552890 SOX11P35716 441 aa9.59□□□□□ -0.87
TRAFD1-208ENST00000552890 ALDH9A1P49189 494 aa9.59□□□□□ -0.87
TRAFD1-208ENST00000552890 CYB561P49447 251 aa9.59□□□□□ -0.87
TRAFD1-208ENST00000552890 NRG3P56975 720 aa9.59□□□□□ -0.87
TRAFD1-208ENST00000552890 HMGCS1Q01581 520 aa9.59□□□□□ -0.87
TRAFD1-208ENST00000552890 EMX2Q04743 252 aa9.59□□□□□ -0.87
TRAFD1-208ENST00000552890 BTKQ06187 659 aa9.59□□□□□ -0.87
TRAFD1-208ENST00000552890 C2orf80Q0P641 193 aa9.59□□□□□ -0.87
TRAFD1-208ENST00000552890 DPY19L1Q2PZI1 675 aa9.59□□□□□ -0.87
TRAFD1-208ENST00000552890 ACER2Q5QJU3 275 aa9.59□□□□□ -0.87
TRAFD1-208ENST00000552890 CPZQ66K79 652 aa9.59□□□□□ -0.87
TRAFD1-208ENST00000552890 CLEC6AQ6EIG7 209 aa9.59□□□□□ -0.87
TRAFD1-208ENST00000552890 RPUSD3Q6P087 351 aaKnown RBP9.59□□□□□ -0.87
TRAFD1-208ENST00000552890 BHLHB9Q6PI77 547 aa9.59□□□□□ -0.87
TRAFD1-208ENST00000552890 OPN5Q6U736 354 aa9.59□□□□□ -0.87
TRAFD1-208ENST00000552890 RNF111Q6ZNA4 994 aa9.59□□□□□ -0.87
TRAFD1-208ENST00000552890 LANCL3Q6ZV70 420 aa9.59□□□□□ -0.87
TRAFD1-208ENST00000552890 TMEM156Q8N614 296 aa9.59□□□□□ -0.87
TRAFD1-208ENST00000552890 EXD3Q8N9H8 876 aa9.59□□□□□ -0.87
TRAFD1-208ENST00000552890 FNDC5Q8NAU1 212 aa9.59□□□□□ -0.87
TRAFD1-208ENST00000552890 TMEM178AQ8NBL3 297 aa9.59□□□□□ -0.87
TRAFD1-208ENST00000552890 C17orf47Q8NEP4 570 aa9.59□□□□□ -0.87
TRAFD1-208ENST00000552890 PIWIL2Q8TC59 973 aaKnown RBP9.59□□□□□ -0.87
TRAFD1-208ENST00000552890 SLC22A8Q8TCC7 542 aa9.59□□□□□ -0.87
TRAFD1-208ENST00000552890 BRIX1Q8TDN6 353 aaKnown RBP9.59□□□□□ -0.87
TRAFD1-208ENST00000552890 C16orf78Q8WTQ4 265 aa9.59□□□□□ -0.87
TRAFD1-208ENST00000552890 TSLPQ969D9 159 aa9.59□□□□□ -0.87
TRAFD1-208ENST00000552890 ANKRD9Q96BM1 317 aaPredicted RBP9.59□□□□□ -0.87
TRAFD1-208ENST00000552890 TM4SF18Q96CE8 201 aa9.59□□□□□ -0.87
TRAFD1-208ENST00000552890 ZBED6CLQ96FA7 236 aaPredicted RBP9.59□□□□□ -0.87
TRAFD1-208ENST00000552890 SENP5Q96HI0 755 aaPredicted RBP9.59□□□□□ -0.87
TRAFD1-208ENST00000552890 SGCZQ96LD1 299 aa9.59□□□□□ -0.87
TRAFD1-208ENST00000552890 BBS4Q96RK4 519 aa9.59□□□□□ -0.87
TRAFD1-208ENST00000552890 KCNA7Q96RP8 456 aa9.59□□□□□ -0.87
TRAFD1-208ENST00000552890 TRIM55Q9BYV6 548 aa9.59□□□□□ -0.87
TRAFD1-208ENST00000552890 C12orf65Q9H3J6 166 aaKnown RBP9.59□□□□□ -0.87
TRAFD1-208ENST00000552890 SLC35C2Q9NQQ7 365 aa9.59□□□□□ -0.87
TRAFD1-208ENST00000552890 NECTIN3Q9NQS3 549 aa9.59□□□□□ -0.87
TRAFD1-208ENST00000552890 AGPAT4Q9NRZ5 378 aa9.59□□□□□ -0.87
TRAFD1-208ENST00000552890 ASIC5Q9NY37 505 aa9.59□□□□□ -0.87
TRAFD1-208ENST00000552890 TP53TG5Q9Y2B4 290 aa9.59□□□□□ -0.87
TRAFD1-208ENST00000552890 RP1L1Q8IWN7 2480 aaPredicted RBP9.59□□□□□ -0.87
TRAFD1-208ENST00000552890 SCN2AQ99250 2005 aa9.58□□□□□ -0.88
TRAFD1-208ENST00000552890 A0A1B0GTL3 188 aa9.58□□□□□ -0.88
TRAFD1-208ENST00000552890 OR5H15A6NDH6 313 aa9.58□□□□□ -0.88
TRAFD1-208ENST00000552890 A8MUI8 341 aa9.58□□□□□ -0.88
TRAFD1-208ENST00000552890 PIP5K1BO14986 540 aa9.58□□□□□ -0.88
TRAFD1-208ENST00000552890 LSM1O15116 133 aaKnown RBP9.58□□□□□ -0.88
TRAFD1-208ENST00000552890 FGF17O60258 216 aa9.58□□□□□ -0.88
TRAFD1-208ENST00000552890 LDB3O75112 727 aa9.58□□□□□ -0.88
TRAFD1-208ENST00000552890 COQ9O75208 318 aa9.58□□□□□ -0.88
TRAFD1-208ENST00000552890 SNNO75324 88 aaPredicted RBP9.58□□□□□ -0.88
TRAFD1-208ENST00000552890 ERAL1O75616 437 aaKnown RBP9.58□□□□□ -0.88
TRAFD1-208ENST00000552890 CRYABP02511 175 aaKnown RBP9.58□□□□□ -0.88
TRAFD1-208ENST00000552890 CHRNGP07510 517 aa9.58□□□□□ -0.88
TRAFD1-208ENST00000552890 NR1D1P20393 614 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms