RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 B3GALT2O43825 422 aa10.97□□□□□ -0.65
CKAP4-202ENST00000552828 CTNSO60931 367 aa10.97□□□□□ -0.65
CKAP4-202ENST00000552828 ERLIN1O75477 346 aa10.97□□□□□ -0.65
CKAP4-202ENST00000552828 CLEC3AO75596 197 aa10.97□□□□□ -0.65
CKAP4-202ENST00000552828 GSTA1P08263 222 aa10.97□□□□□ -0.65
CKAP4-202ENST00000552828 EPB42P16452 691 aa10.97□□□□□ -0.65
CKAP4-202ENST00000552828 ZNF10P21506 573 aaPredicted RBP10.97□□□□□ -0.65
CKAP4-202ENST00000552828 CNR1P21554 472 aa10.97□□□□□ -0.65
CKAP4-202ENST00000552828 ACVR2AP27037 513 aa10.97□□□□□ -0.65
CKAP4-202ENST00000552828 DNAJA1P31689 397 aaKnown RBP10.97□□□□□ -0.65
CKAP4-202ENST00000552828 SOX3P41225 446 aa10.97□□□□□ -0.65
CKAP4-202ENST00000552828 CCT5P48643 541 aa10.97□□□□□ -0.65
CKAP4-202ENST00000552828 ART1P52961 327 aa10.97□□□□□ -0.65
CKAP4-202ENST00000552828 LIM2P55344 173 aa10.97□□□□□ -0.65
CKAP4-202ENST00000552828 GABPB1Q06547 395 aaPredicted RBP10.97□□□□□ -0.65
CKAP4-202ENST00000552828 PCBP2Q15366 365 aaKnown RBP eCLIP10.97□□□□□ -0.65
CKAP4-202ENST00000552828 METTL2BQ6P1Q9 378 aaKnown RBP10.97□□□□□ -0.65
CKAP4-202ENST00000552828 IL20RBQ6UXL0 311 aa10.97□□□□□ -0.65
CKAP4-202ENST00000552828 HSDL2Q6YN16 418 aa10.97□□□□□ -0.65
CKAP4-202ENST00000552828 VN1R5Q7Z5H4 357 aa10.97□□□□□ -0.65
CKAP4-202ENST00000552828 CLYBLQ8N0X4 340 aa10.97□□□□□ -0.65
CKAP4-202ENST00000552828 KRT78Q8N1N4 520 aa10.97□□□□□ -0.65
CKAP4-202ENST00000552828 PTGR2Q8N8N7 351 aaPredicted RBP10.97□□□□□ -0.65
CKAP4-202ENST00000552828 GOLM1Q8NBJ4 401 aa10.97□□□□□ -0.65
CKAP4-202ENST00000552828 MORN4Q8NDC4 146 aa10.97□□□□□ -0.65
CKAP4-202ENST00000552828 OR2L5Q8NG80 312 aa10.97□□□□□ -0.65
CKAP4-202ENST00000552828 PTPMT1Q8WUK0 201 aaPredicted RBP10.97□□□□□ -0.65
CKAP4-202ENST00000552828 ASB15Q8WXK1 588 aa10.97□□□□□ -0.65
CKAP4-202ENST00000552828 DAZLQ92904 295 aaKnown RBP10.97□□□□□ -0.65
CKAP4-202ENST00000552828 POM121Q96HA1 1249 aa10.97□□□□□ -0.65
CKAP4-202ENST00000552828 SGCZQ96LD1 299 aa10.97□□□□□ -0.65
CKAP4-202ENST00000552828 FAM173AQ9BQD7 235 aa10.97□□□□□ -0.65
CKAP4-202ENST00000552828 TTYH2Q9BSA4 534 aa10.97□□□□□ -0.65
CKAP4-202ENST00000552828 TMUB1Q9BVT8 246 aa10.97□□□□□ -0.65
CKAP4-202ENST00000552828 CXXC4Q9H2H0 198 aa10.97□□□□□ -0.65
CKAP4-202ENST00000552828 IL1RL2Q9HB29 575 aa10.97□□□□□ -0.65
CKAP4-202ENST00000552828 PNPLA3Q9NST1 481 aa10.97□□□□□ -0.65
CKAP4-202ENST00000552828 TMEM216Q9P0N5 145 aa10.97□□□□□ -0.65
CKAP4-202ENST00000552828 DAPP1Q9UN19 280 aa10.97□□□□□ -0.65
CKAP4-202ENST00000552828 FAM215AQ9Y5M1 114 aa10.97□□□□□ -0.65
CKAP4-202ENST00000552828 CLCA3PQ9Y6N3 262 aa10.97□□□□□ -0.65
CKAP4-202ENST00000552828 A0A0G2JMM0 328 aa10.96□□□□□ -0.65
CKAP4-202ENST00000552828 A0A0G2JN53 185 aa10.96□□□□□ -0.65
CKAP4-202ENST00000552828 A0A1W2PPB8 328 aa10.96□□□□□ -0.65
CKAP4-202ENST00000552828 A0A1W2PRS3 328 aa10.96□□□□□ -0.65
CKAP4-202ENST00000552828 FIGNL2A6NMB9 653 aa10.96□□□□□ -0.65
CKAP4-202ENST00000552828 FAM166BA8MTA8 275 aa10.96□□□□□ -0.65
CKAP4-202ENST00000552828 KIR3DP1A8MWS1 328 aa10.96□□□□□ -0.65
CKAP4-202ENST00000552828 STX16-NPEPL1H3BU86 382 aa10.96□□□□□ -0.65
CKAP4-202ENST00000552828 STX16O14662 325 aa10.96□□□□□ -0.65
CKAP4-202ENST00000552828 SUSD5O60279 629 aa10.96□□□□□ -0.65
CKAP4-202ENST00000552828 GLI4P10075 376 aa10.96□□□□□ -0.65
CKAP4-202ENST00000552828 TAC1P20366 129 aa10.96□□□□□ -0.65
CKAP4-202ENST00000552828 HPDP32754 393 aaPredicted RBP10.96□□□□□ -0.65
CKAP4-202ENST00000552828 PIK3CGP48736 1102 aa10.96□□□□□ -0.65
CKAP4-202ENST00000552828 HK2P52789 917 aa10.96□□□□□ -0.65
CKAP4-202ENST00000552828 PLGLB1Q02325 96 aa10.96□□□□□ -0.65
CKAP4-202ENST00000552828 IRF8Q02556 426 aa10.96□□□□□ -0.65
CKAP4-202ENST00000552828 FOXO1Q12778 655 aa10.96□□□□□ -0.65
CKAP4-202ENST00000552828 CHIT1Q13231 466 aa10.96□□□□□ -0.65
CKAP4-202ENST00000552828 LAPTM5Q13571 262 aa10.96□□□□□ -0.65
CKAP4-202ENST00000552828 RCN2Q14257 317 aa10.96□□□□□ -0.65
CKAP4-202ENST00000552828 SLBPQ14493 270 aaKnown RBP eCLIP10.96□□□□□ -0.65
CKAP4-202ENST00000552828 TBCCQ15814 346 aa10.96□□□□□ -0.65
CKAP4-202ENST00000552828 HIST2H2ACQ16777 129 aaPredicted RBP10.96□□□□□ -0.65
CKAP4-202ENST00000552828 PAGE2BQ5JRK9 111 aa10.96□□□□□ -0.65
CKAP4-202ENST00000552828 HIST2H2AA3Q6FI13 130 aa10.96□□□□□ -0.65
CKAP4-202ENST00000552828 RTL6Q6ICC9 239 aa10.96□□□□□ -0.65
CKAP4-202ENST00000552828 ABHD17CQ6PCB6 329 aa10.96□□□□□ -0.65
CKAP4-202ENST00000552828 RTL4Q6ZR62 310 aa10.96□□□□□ -0.65
CKAP4-202ENST00000552828 GK5Q6ZS86 529 aa10.96□□□□□ -0.65
CKAP4-202ENST00000552828 TRILQ7L0X0 811 aa10.96□□□□□ -0.65
CKAP4-202ENST00000552828 FAM109AQ8N4B1 249 aa10.96□□□□□ -0.65
CKAP4-202ENST00000552828 TMEM251Q8N6I4 163 aa10.96□□□□□ -0.65
CKAP4-202ENST00000552828 TEX9Q8N6V9 391 aa10.96□□□□□ -0.65
CKAP4-202ENST00000552828 FAM47BQ8NA70 645 aa10.96□□□□□ -0.65
CKAP4-202ENST00000552828 OR5M3Q8NGP4 307 aa10.96□□□□□ -0.65
CKAP4-202ENST00000552828 OR14A16Q8NHC5 309 aa10.96□□□□□ -0.65
CKAP4-202ENST00000552828 NINJ1Q92982 152 aa10.96□□□□□ -0.65
CKAP4-202ENST00000552828 PHF21BQ96EK2 531 aa10.96□□□□□ -0.65
CKAP4-202ENST00000552828 WDR34Q96EX3 536 aa10.96□□□□□ -0.65
CKAP4-202ENST00000552828 PTCD3Q96EY7 689 aaKnown RBP10.96□□□□□ -0.65
CKAP4-202ENST00000552828 SERINC2Q96SA4 455 aa10.96□□□□□ -0.65
CKAP4-202ENST00000552828 SMC6Q96SB8 1091 aa10.96□□□□□ -0.65
CKAP4-202ENST00000552828 FOXC2Q99958 501 aa10.96□□□□□ -0.65
CKAP4-202ENST00000552828 EFCAB11Q9BUY7 163 aa10.96□□□□□ -0.65
CKAP4-202ENST00000552828 TMEM109Q9BVC6 243 aa10.96□□□□□ -0.65
CKAP4-202ENST00000552828 REXO4Q9GZR2 422 aaKnown RBP10.96□□□□□ -0.65
CKAP4-202ENST00000552828 LIN28AQ9H9Z2 209 aaKnown RBP10.96□□□□□ -0.65
CKAP4-202ENST00000552828 ARGLU1Q9NWB6 273 aaPredicted RBP10.96□□□□□ -0.65
CKAP4-202ENST00000552828 ANKHD1Q8IWZ3 2542 aaKnown RBP10.95□□□□□ -0.66
CKAP4-202ENST00000552828 A0A0G2JNJ9 132 aa10.95□□□□□ -0.66
CKAP4-202ENST00000552828 WWP2O00308 870 aa10.95□□□□□ -0.66
CKAP4-202ENST00000552828 AQP7O14520 342 aa10.95□□□□□ -0.66
CKAP4-202ENST00000552828 ZNF354AO60765 605 aaPredicted RBP10.95□□□□□ -0.66
CKAP4-202ENST00000552828 WDR1O75083 606 aa10.95□□□□□ -0.66
CKAP4-202ENST00000552828 GLRA3O75311 464 aa10.95□□□□□ -0.66
CKAP4-202ENST00000552828 CTAG2O75638 210 aa10.95□□□□□ -0.66
CKAP4-202ENST00000552828 SIX3O95343 332 aaPredicted RBP10.95□□□□□ -0.66
CKAP4-202ENST00000552828 KRT4P19013 534 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms