RNA–Protein interactions for RNA: ENST00000550869.5

ERBB3-216, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 4

Gene ERBB3, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-216ENST00000550869 CASRP41180 1078 aa11.38□□□□□ -0.59
ERBB3-216ENST00000550869 AVPR1BP47901 424 aa11.38□□□□□ -0.59
ERBB3-216ENST00000550869 HNRNPFP52597 415 aaKnown RBP11.38□□□□□ -0.59
ERBB3-216ENST00000550869 KCNK10P57789 538 aa11.38□□□□□ -0.59
ERBB3-216ENST00000550869 CDC20Q12834 499 aa11.38□□□□□ -0.59
ERBB3-216ENST00000550869 DSG2Q14126 1118 aa11.38□□□□□ -0.59
ERBB3-216ENST00000550869 SPRED3Q2MJR0 410 aa11.38□□□□□ -0.59
ERBB3-216ENST00000550869 FAM174BQ3ZCQ3 159 aa11.38□□□□□ -0.59
ERBB3-216ENST00000550869 VPS26BQ4G0F5 336 aa11.38□□□□□ -0.59
ERBB3-216ENST00000550869 ZNF385BQ569K4 471 aa11.38□□□□□ -0.59
ERBB3-216ENST00000550869 C18orf63Q68DL7 685 aa11.38□□□□□ -0.59
ERBB3-216ENST00000550869 ZNF517Q6ZMY9 492 aaPredicted RBP11.38□□□□□ -0.59
ERBB3-216ENST00000550869 TTLL10Q6ZVT0 673 aa11.38□□□□□ -0.59
ERBB3-216ENST00000550869 RETREG3Q86VR2 466 aa11.38□□□□□ -0.59
ERBB3-216ENST00000550869 DPP10Q8N608 796 aa11.38□□□□□ -0.59
ERBB3-216ENST00000550869 ESX1Q8N693 406 aa11.38□□□□□ -0.59
ERBB3-216ENST00000550869 NATD1Q8N6N6 113 aa11.38□□□□□ -0.59
ERBB3-216ENST00000550869 FAM47BQ8NA70 645 aa11.38□□□□□ -0.59
ERBB3-216ENST00000550869 DNAJB14Q8TBM8 379 aa11.38□□□□□ -0.59
ERBB3-216ENST00000550869 ADAMTS18Q8TE60 1221 aa11.38□□□□□ -0.59
ERBB3-216ENST00000550869 GFM2Q969S9 779 aaKnown RBP11.38□□□□□ -0.59
ERBB3-216ENST00000550869 ZBTB18Q99592 522 aa11.38□□□□□ -0.59
ERBB3-216ENST00000550869 PRPF18Q99633 342 aaKnown RBP11.38□□□□□ -0.59
ERBB3-216ENST00000550869 BHLHE41Q9C0J9 482 aaPredicted RBP11.38□□□□□ -0.59
ERBB3-216ENST00000550869 SLC22A11Q9NSA0 550 aa11.38□□□□□ -0.59
ERBB3-216ENST00000550869 MAP10Q9P2G4 905 aa11.38□□□□□ -0.59
ERBB3-216ENST00000550869 DHCR7Q9UBM7 475 aaKnown RBP11.38□□□□□ -0.59
ERBB3-216ENST00000550869 ERVK-11Q9UQG0 969 aa11.38□□□□□ -0.59
ERBB3-216ENST00000550869 MAN2B2Q9Y2E5 1009 aa11.38□□□□□ -0.59
ERBB3-216ENST00000550869 NDUFAF1Q9Y375 327 aa11.38□□□□□ -0.59
ERBB3-216ENST00000550869 LRRK2Q5S007 2527 aa11.37□□□□□ -0.59
ERBB3-216ENST00000550869 BLACEA4D250 179 aa11.37□□□□□ -0.59
ERBB3-216ENST00000550869 ZNF860A6NHJ4 632 aa11.37□□□□□ -0.59
ERBB3-216ENST00000550869 PGRMC2O15173 223 aa11.37□□□□□ -0.59
ERBB3-216ENST00000550869 CFLARO15519 480 aa11.37□□□□□ -0.59
ERBB3-216ENST00000550869 SCRG1O75711 98 aa11.37□□□□□ -0.59
ERBB3-216ENST00000550869 ATP5HO75947 161 aa11.37□□□□□ -0.59
ERBB3-216ENST00000550869 IL10P22301 178 aa11.37□□□□□ -0.59
ERBB3-216ENST00000550869 CPN2P22792 545 aa11.37□□□□□ -0.59
ERBB3-216ENST00000550869 S100A3P33764 101 aa11.37□□□□□ -0.59
ERBB3-216ENST00000550869 HPCAL1P37235 193 aa11.37□□□□□ -0.59
ERBB3-216ENST00000550869 BUD31P41223 144 aaPredicted RBP11.37□□□□□ -0.59
ERBB3-216ENST00000550869 STAT5AP42229 794 aa11.37□□□□□ -0.59
ERBB3-216ENST00000550869 KIR3DL1P43629 444 aa11.37□□□□□ -0.59
ERBB3-216ENST00000550869 DGKQP52824 942 aa11.37□□□□□ -0.59
ERBB3-216ENST00000550869 OLR1P78380 273 aa11.37□□□□□ -0.59
ERBB3-216ENST00000550869 STX5Q13190 355 aa11.37□□□□□ -0.59
ERBB3-216ENST00000550869 MLC1Q15049 377 aa11.37□□□□□ -0.59
ERBB3-216ENST00000550869 CPTPQ5TA50 214 aa11.37□□□□□ -0.59
ERBB3-216ENST00000550869 SLC48A1Q6P1K1 146 aa11.37□□□□□ -0.59
ERBB3-216ENST00000550869 C8orf82Q6P1X6 216 aaPredicted RBP11.37□□□□□ -0.59
ERBB3-216ENST00000550869 HACD2Q6Y1H2 254 aa11.37□□□□□ -0.59
ERBB3-216ENST00000550869 COX15Q7KZN9 410 aa11.37□□□□□ -0.59
ERBB3-216ENST00000550869 TICAM1Q8IUC6 712 aa11.37□□□□□ -0.59
ERBB3-216ENST00000550869 POU5F2Q8N7G0 328 aa11.37□□□□□ -0.59
ERBB3-216ENST00000550869 PPCDCQ96CD2 204 aa11.37□□□□□ -0.59
ERBB3-216ENST00000550869 SLC7A6OSQ96CW6 309 aaPredicted RBP11.37□□□□□ -0.59
ERBB3-216ENST00000550869 MMABQ96EY8 250 aaPredicted RBP11.37□□□□□ -0.59
ERBB3-216ENST00000550869 ZNF681Q96N22 645 aa11.37□□□□□ -0.59
ERBB3-216ENST00000550869 CSF3RQ99062 836 aa11.37□□□□□ -0.59
ERBB3-216ENST00000550869 CTRCQ99895 268 aa11.37□□□□□ -0.59
ERBB3-216ENST00000550869 C1orf21Q9H246 121 aa11.37□□□□□ -0.59
ERBB3-216ENST00000550869 ACTR5Q9H9F9 607 aaPredicted RBP11.37□□□□□ -0.59
ERBB3-216ENST00000550869 SERHLQ9NQF3 203 aa11.37□□□□□ -0.59
ERBB3-216ENST00000550869 IRAK4Q9NWZ3 460 aa11.37□□□□□ -0.59
ERBB3-216ENST00000550869 FAM120CQ9NX05 1096 aaKnown RBP11.37□□□□□ -0.59
ERBB3-216ENST00000550869 BTNL2Q9UIR0 455 aa11.37□□□□□ -0.59
ERBB3-216ENST00000550869 FBXW2Q9UKT8 454 aa11.37□□□□□ -0.59
ERBB3-216ENST00000550869 MAP4K5Q9Y4K4 846 aa11.37□□□□□ -0.59
ERBB3-216ENST00000550869 CLDN16Q9Y5I7 305 aa11.37□□□□□ -0.59
ERBB3-216ENST00000550869 CCDC88CQ9P219 2028 aa11.36□□□□□ -0.59
ERBB3-216ENST00000550869 LOC101059948A0A1B0GTJ6 334 aa11.36□□□□□ -0.59
ERBB3-216ENST00000550869 PRSS51A0A1B0GVH4 220 aa11.36□□□□□ -0.59
ERBB3-216ENST00000550869 CCDC154A6NI56 674 aa11.36□□□□□ -0.59
ERBB3-216ENST00000550869 WASHC1A8K0Z3 465 aa11.36□□□□□ -0.59
ERBB3-216ENST00000550869 NR5A2O00482 541 aa11.36□□□□□ -0.59
ERBB3-216ENST00000550869 RNASET2O00584 256 aaKnown RBP11.36□□□□□ -0.59
ERBB3-216ENST00000550869 NKX2-8O15522 239 aa11.36□□□□□ -0.59
ERBB3-216ENST00000550869 HNRNPCL1O60812 293 aaKnown RBP11.36□□□□□ -0.59
ERBB3-216ENST00000550869 PRKRAO75569 313 aaKnown RBP11.36□□□□□ -0.59
ERBB3-216ENST00000550869 NPPAP01160 153 aa11.36□□□□□ -0.59
ERBB3-216ENST00000550869 NR2F6P10588 404 aa11.36□□□□□ -0.59
ERBB3-216ENST00000550869 ESRRAP11474 423 aaPredicted RBP11.36□□□□□ -0.59
ERBB3-216ENST00000550869 RNH1P13489 461 aaKnown RBP11.36□□□□□ -0.59
ERBB3-216ENST00000550869 COX7A2P14406 83 aa11.36□□□□□ -0.59
ERBB3-216ENST00000550869 ZNF28P17035 718 aa11.36□□□□□ -0.59
ERBB3-216ENST00000550869 HOXB9P17482 250 aaPredicted RBP11.36□□□□□ -0.59
ERBB3-216ENST00000550869 DDX5P17844 614 aaKnown RBP11.36□□□□□ -0.59
ERBB3-216ENST00000550869 TCN2P20062 427 aa11.36□□□□□ -0.59
ERBB3-216ENST00000550869 PTPN6P29350 595 aa11.36□□□□□ -0.59
ERBB3-216ENST00000550869 TLX1P31314 330 aaPredicted RBP11.36□□□□□ -0.59
ERBB3-216ENST00000550869 CPOXP36551 454 aa11.36□□□□□ -0.59
ERBB3-216ENST00000550869 OR1D4P47884 311 aa11.36□□□□□ -0.59
ERBB3-216ENST00000550869 MNAT1P51948 309 aa11.36□□□□□ -0.59
ERBB3-216ENST00000550869 IGLV3-21P80748 117 aaPredicted RBP11.36□□□□□ -0.59
ERBB3-216ENST00000550869 FOXK1P85037 733 aa11.36□□□□□ -0.59
ERBB3-216ENST00000550869 SRSF1Q07955 248 aaKnown RBP eCLIP11.36□□□□□ -0.59
ERBB3-216ENST00000550869 PAGE3Q5JUK9 113 aa11.36□□□□□ -0.59
ERBB3-216ENST00000550869 COLEC12Q5KU26 742 aa11.36□□□□□ -0.59
ERBB3-216ENST00000550869 REP15Q6BDI9 236 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms