RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 ADORA2A-AS1P86434 159 aa12.52□□□□□ -0.41
NUP188-211ENST00000550219 CPSF6Q16630 551 aaKnown RBP eCLIP12.52□□□□□ -0.41
NUP188-211ENST00000550219 HIST2H2ACQ16777 129 aaPredicted RBP12.52□□□□□ -0.41
NUP188-211ENST00000550219 KANK2Q63ZY3 851 aa12.52□□□□□ -0.41
NUP188-211ENST00000550219 TTC19Q6DKK2 380 aaPredicted RBP12.52□□□□□ -0.41
NUP188-211ENST00000550219 HIST2H2AA3Q6FI13 130 aa12.52□□□□□ -0.41
NUP188-211ENST00000550219 SLC25A25Q6KCM7 469 aa12.52□□□□□ -0.41
NUP188-211ENST00000550219 TMIGD1Q6UXZ0 262 aa12.52□□□□□ -0.41
NUP188-211ENST00000550219 LGI4Q8N135 537 aa12.52□□□□□ -0.41
NUP188-211ENST00000550219 CA13Q8N1Q1 262 aa12.52□□□□□ -0.41
NUP188-211ENST00000550219 CPSF7Q8N684 471 aaKnown RBP12.52□□□□□ -0.41
NUP188-211ENST00000550219 ZNF781Q8N8C0 355 aa12.52□□□□□ -0.41
NUP188-211ENST00000550219 CDYL2Q8N8U2 506 aa12.52□□□□□ -0.41
NUP188-211ENST00000550219 TRPV3Q8NET8 790 aa12.52□□□□□ -0.41
NUP188-211ENST00000550219 OR7G3Q8NG95 312 aa12.52□□□□□ -0.41
NUP188-211ENST00000550219 METTL6Q8TCB7 284 aa12.52□□□□□ -0.41
NUP188-211ENST00000550219 ELP5Q8TE02 316 aa12.52□□□□□ -0.41
NUP188-211ENST00000550219 THAP3Q8WTV1 239 aaPredicted RBP12.52□□□□□ -0.41
NUP188-211ENST00000550219 ZNF317Q96PQ6 595 aaPredicted RBP12.52□□□□□ -0.41
NUP188-211ENST00000550219 RUBCNLQ9H714 662 aa12.52□□□□□ -0.41
NUP188-211ENST00000550219 PRM3Q9NNZ6 103 aa12.52□□□□□ -0.41
NUP188-211ENST00000550219 NECTIN3Q9NQS3 549 aa12.52□□□□□ -0.41
NUP188-211ENST00000550219 PRDM9Q9NQV7 894 aa12.52□□□□□ -0.41
NUP188-211ENST00000550219 PSD3Q9NYI0 1048 aa12.52□□□□□ -0.41
NUP188-211ENST00000550219 PPT2Q9UMR5 302 aa12.52□□□□□ -0.41
NUP188-211ENST00000550219 PCDHGB6Q9Y5F9 930 aa12.52□□□□□ -0.41
NUP188-211ENST00000550219 KLF2Q9Y5W3 355 aaPredicted RBP12.52□□□□□ -0.41
NUP188-211ENST00000550219 CACNA1DQ01668 2161 aa12.52□□□□□ -0.41
NUP188-211ENST00000550219 CNTRLQ7Z7A1 2325 aa12.51□□□□□ -0.41
NUP188-211ENST00000550219 TRBV11-1A0A0K0K1C0 115 aa12.51□□□□□ -0.41
NUP188-211ENST00000550219 ASPDHA6ND91 283 aa12.51□□□□□ -0.41
NUP188-211ENST00000550219 MANBAO00462 879 aa12.51□□□□□ -0.41
NUP188-211ENST00000550219 EDF1O60869 148 aaKnown RBP12.51□□□□□ -0.41
NUP188-211ENST00000550219 MYO1DO94832 1006 aa12.51□□□□□ -0.41
NUP188-211ENST00000550219 COX6B1P14854 86 aa12.51□□□□□ -0.41
NUP188-211ENST00000550219 SERPINB1P30740 379 aa12.51□□□□□ -0.41
NUP188-211ENST00000550219 ARL1P40616 181 aaPredicted RBP12.51□□□□□ -0.41
NUP188-211ENST00000550219 PIK3CBP42338 1070 aa12.51□□□□□ -0.41
NUP188-211ENST00000550219 CYB561P49447 251 aa12.51□□□□□ -0.41
NUP188-211ENST00000550219 RPL14P50914 215 aaKnown RBP12.51□□□□□ -0.41
NUP188-211ENST00000550219 BTN3A2P78410 334 aa12.51□□□□□ -0.41
NUP188-211ENST00000550219 SH2D4BQ5SQS7 431 aa12.51□□□□□ -0.41
NUP188-211ENST00000550219 FRG2Q64ET8 278 aa12.51□□□□□ -0.41
NUP188-211ENST00000550219 CLEC6AQ6EIG7 209 aa12.51□□□□□ -0.41
NUP188-211ENST00000550219 VN1R5Q7Z5H4 357 aa12.51□□□□□ -0.41
NUP188-211ENST00000550219 MYLK4Q86YV6 388 aaPredicted RBP12.51□□□□□ -0.41
NUP188-211ENST00000550219 TTLQ8NG68 377 aa12.51□□□□□ -0.41
NUP188-211ENST00000550219 CREB3L4Q8TEY5 395 aa12.51□□□□□ -0.41
NUP188-211ENST00000550219 TMEM125Q96AQ2 219 aa12.51□□□□□ -0.41
NUP188-211ENST00000550219 REPS1Q96D71 796 aa12.51□□□□□ -0.41
NUP188-211ENST00000550219 FAR2Q96K12 515 aa12.51□□□□□ -0.41
NUP188-211ENST00000550219 FRG2BQ96QU4 278 aa12.51□□□□□ -0.41
NUP188-211ENST00000550219 KCNA7Q96RP8 456 aa12.51□□□□□ -0.41
NUP188-211ENST00000550219 DEFB126Q9BYW3 111 aa12.51□□□□□ -0.41
NUP188-211ENST00000550219 AICDAQ9GZX7 198 aa12.51□□□□□ -0.41
NUP188-211ENST00000550219 PNO1Q9NRX1 252 aaKnown RBP12.51□□□□□ -0.41
NUP188-211ENST00000550219 PNPOQ9NVS9 261 aa12.51□□□□□ -0.41
NUP188-211ENST00000550219 ADGRE2Q9UHX3 823 aa12.51□□□□□ -0.41
NUP188-211ENST00000550219 SNX6Q9UNH7 406 aa12.51□□□□□ -0.41
NUP188-211ENST00000550219 TIMM22Q9Y584 194 aa12.51□□□□□ -0.41
NUP188-211ENST00000550219 DNAJC15Q9Y5T4 150 aa12.51□□□□□ -0.41
NUP188-211ENST00000550219 DIDO1Q9BTC0 2240 aaKnown RBP12.51□□□□□ -0.41
NUP188-211ENST00000550219 SCN2AQ99250 2005 aa12.5□□□□□ -0.41
NUP188-211ENST00000550219 TCRBV16S1A1N1A0A5B0 115 aa12.5□□□□□ -0.41
NUP188-211ENST00000550219 TMEM233B4DJY2 109 aa12.5□□□□□ -0.41
NUP188-211ENST00000550219 FOXE1O00358 373 aaPredicted RBP12.5□□□□□ -0.41
NUP188-211ENST00000550219 FCHO1O14526 889 aa12.5□□□□□ -0.41
NUP188-211ENST00000550219 ERI3O43414 337 aaKnown RBP12.5□□□□□ -0.41
NUP188-211ENST00000550219 NME2P1O60361 137 aa12.5□□□□□ -0.41
NUP188-211ENST00000550219 TBX6O95947 436 aaPredicted RBP12.5□□□□□ -0.41
NUP188-211ENST00000550219 KRT6AP02538 564 aa12.5□□□□□ -0.41
NUP188-211ENST00000550219 KRT6BP04259 564 aa12.5□□□□□ -0.41
NUP188-211ENST00000550219 SERPINA6P08185 405 aa12.5□□□□□ -0.41
NUP188-211ENST00000550219 NME2P22392 152 aa12.5□□□□□ -0.41
NUP188-211ENST00000550219 SERPINB3P29508 390 aa12.5□□□□□ -0.41
NUP188-211ENST00000550219 HMOX2P30519 316 aa12.5□□□□□ -0.41
NUP188-211ENST00000550219 LSP1P33241 339 aa12.5□□□□□ -0.41
NUP188-211ENST00000550219 RFC3P40938 356 aa12.5□□□□□ -0.41
NUP188-211ENST00000550219 KRT6CP48668 564 aa12.5□□□□□ -0.41
NUP188-211ENST00000550219 SMSP52788 366 aa12.5□□□□□ -0.41
NUP188-211ENST00000550219 HK2P52789 917 aa12.5□□□□□ -0.41
NUP188-211ENST00000550219 MLF1P58340 268 aa12.5□□□□□ -0.41
NUP188-211ENST00000550219 STXBP1P61764 594 aaKnown RBP12.5□□□□□ -0.41
NUP188-211ENST00000550219 TCHHL1Q5QJ38 904 aaPredicted RBP12.5□□□□□ -0.41
NUP188-211ENST00000550219 FAM219BQ5XKK7 198 aa12.5□□□□□ -0.41
NUP188-211ENST00000550219 C3P1Q6ZMU1 363 aa12.5□□□□□ -0.41
NUP188-211ENST00000550219 FAM47EQ6ZV65 393 aa12.5□□□□□ -0.41
NUP188-211ENST00000550219 TRIM46Q7Z4K8 759 aa12.5□□□□□ -0.41
NUP188-211ENST00000550219 GDF7Q7Z4P5 450 aa12.5□□□□□ -0.41
NUP188-211ENST00000550219 SPPL2CQ8IUH8 684 aa12.5□□□□□ -0.41
NUP188-211ENST00000550219 GHDCQ8N2G8 530 aa12.5□□□□□ -0.41
NUP188-211ENST00000550219 FAM47BQ8NA70 645 aa12.5□□□□□ -0.41
NUP188-211ENST00000550219 HUS1BQ8NHY5 278 aa12.5□□□□□ -0.41
NUP188-211ENST00000550219 PIWIL2Q8TC59 973 aaKnown RBP12.5□□□□□ -0.41
NUP188-211ENST00000550219 ZNF473Q8WTR7 871 aaKnown RBP12.5□□□□□ -0.41
NUP188-211ENST00000550219 GAL3ST3Q96A11 431 aa12.5□□□□□ -0.41
NUP188-211ENST00000550219 TUBB1Q9H4B7 451 aa12.5□□□□□ -0.41
NUP188-211ENST00000550219 PRTFDC1Q9NRG1 225 aa12.5□□□□□ -0.41
NUP188-211ENST00000550219 ADAM21Q9UKJ8 722 aa12.5□□□□□ -0.41
NUP188-211ENST00000550219 FBXW2Q9UKT8 454 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms