RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 WDR92Q96MX6 357 aa8.48□□□□□ -1.05
TMEM116-209ENST00000550020 AMDHD1Q96NU7 426 aa8.48□□□□□ -1.05
TMEM116-209ENST00000550020 NECTIN4Q96NY8 510 aa8.48□□□□□ -1.05
TMEM116-209ENST00000550020 MYADMQ96S97 322 aa8.48□□□□□ -1.05
TMEM116-209ENST00000550020 MYOCQ99972 504 aa8.48□□□□□ -1.05
TMEM116-209ENST00000550020 C17orf62Q9BQA9 187 aa8.48□□□□□ -1.05
TMEM116-209ENST00000550020 SORBS1Q9BX66 1292 aaKnown RBP8.48□□□□□ -1.05
TMEM116-209ENST00000550020 TEX12Q9BXU0 123 aa8.48□□□□□ -1.05
TMEM116-209ENST00000550020 PLA2G2FQ9BZM2 168 aa8.48□□□□□ -1.05
TMEM116-209ENST00000550020 NAA50Q9GZZ1 169 aaKnown RBP8.48□□□□□ -1.05
TMEM116-209ENST00000550020 OR51I1Q9H343 314 aa8.48□□□□□ -1.05
TMEM116-209ENST00000550020 C8orf33Q9H7E9 229 aaPredicted RBP8.48□□□□□ -1.05
TMEM116-209ENST00000550020 CERS4Q9HA82 394 aa8.48□□□□□ -1.05
TMEM116-209ENST00000550020 TM7SF3Q9NS93 570 aa8.48□□□□□ -1.05
TMEM116-209ENST00000550020 ZCCHC3Q9NUD5 404 aaKnown RBP8.48□□□□□ -1.05
TMEM116-209ENST00000550020 MS4A12Q9NXJ0 267 aa8.48□□□□□ -1.05
TMEM116-209ENST00000550020 KLHL28Q9NXS3 571 aa8.48□□□□□ -1.05
TMEM116-209ENST00000550020 PCOLCE2Q9UKZ9 415 aa8.48□□□□□ -1.05
TMEM116-209ENST00000550020 HCN2Q9UL51 889 aa8.48□□□□□ -1.05
TMEM116-209ENST00000550020 WDR37Q9Y2I8 494 aa8.48□□□□□ -1.05
TMEM116-209ENST00000550020 YBX2Q9Y2T7 364 aaKnown RBP8.48□□□□□ -1.05
TMEM116-209ENST00000550020 GPC6Q9Y625 555 aaPredicted RBP8.48□□□□□ -1.05
TMEM116-209ENST00000550020 DGKBQ9Y6T7 804 aa8.48□□□□□ -1.05
TMEM116-209ENST00000550020 A3GALT2U3KPV4 340 aa8.48□□□□□ -1.05
TMEM116-209ENST00000550020 SPACA6W5XKT8 324 aa8.48□□□□□ -1.05
TMEM116-209ENST00000550020 ANKRD12Q6UB98 2062 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 A0A1W2PRQ8 180 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 PRSS38A1L453 326 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 OR2A25A4D2G3 310 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 LRRC72A6NJI9 287 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 ZAR1LA6NP61 321 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 ISM1B1AKI9 464 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 SYT5O00445 386 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 HMGN4O00479 90 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 MAN2B1O00754 1011 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 EMC8O43402 210 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 C1QCP02747 245 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 SLC35G6P0C7Q6 338 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 ATP5A1P25705 553 aaKnown RBP8.47□□□□□ -1.05
TMEM116-209ENST00000550020 ACVR2AP27037 513 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 PSMB5P28074 263 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 TLX1P31314 330 aaPredicted RBP8.47□□□□□ -1.05
TMEM116-209ENST00000550020 AKT2P31751 481 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 BCL6P41182 706 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 BUD31P41223 144 aaPredicted RBP8.47□□□□□ -1.05
TMEM116-209ENST00000550020 CTSKP43235 329 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 STT3AP46977 705 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 EMP3P54852 163 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 SNRPGP62308 76 aaKnown RBP8.47□□□□□ -1.05
TMEM116-209ENST00000550020 YPEL5P62699 121 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 ALDH6A1Q02252 535 aaKnown RBP8.47□□□□□ -1.05
TMEM116-209ENST00000550020 RELAQ04206 551 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 PIGFQ07326 219 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 ILKQ13418 452 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 TMED1Q13445 227 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 DGCR6Q14129 220 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 FGL2Q14314 439 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 SHHQ15465 462 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 MLF2Q15773 248 aaPredicted RBP8.47□□□□□ -1.05
TMEM116-209ENST00000550020 RGS21Q2M5E4 152 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 TJAP1Q5JTD0 557 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 EOGTQ5NDL2 527 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 FRMPD2BQ6IN97 320 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 KIAA1211LQ6NV74 962 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 SLC48A1Q6P1K1 146 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 DUS1LQ6P1R4 473 aaKnown RBP8.47□□□□□ -1.05
TMEM116-209ENST00000550020 KLHL35Q6PF15 583 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 PARM1Q6UWI2 310 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 CASP12Q6UXS9 341 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 CD300LDQ6UXZ3 194 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 SLC16A12Q6ZSM3 486 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 PTCHD4Q6ZW05 846 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 USP43Q70EL4 1123 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 SZRD1Q7Z422 152 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 UBE3DQ7Z6J8 389 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 TSEN54Q7Z6J9 526 aaKnown RBP8.47□□□□□ -1.05
TMEM116-209ENST00000550020 SLCO6A1Q86UG4 719 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 CACUL1Q86Y37 369 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 NRROSQ86YC3 692 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 ZNF655Q8N720 491 aaPredicted RBP8.47□□□□□ -1.05
TMEM116-209ENST00000550020 AMER2Q8N7J2 671 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 ACOT4Q8N9L9 421 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 IL17RCQ8NAC3 791 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 SMYD1Q8NB12 490 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 TOR1AIP2Q8NFQ8 470 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 OR52J3Q8NH60 311 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 NT5CQ8TCD5 201 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 XAGE5Q8WWM1 108 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 EZH1Q92800 747 aaPredicted RBP8.47□□□□□ -1.05
TMEM116-209ENST00000550020 SIPA1Q96FS4 1042 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 OTUB1Q96FW1 271 aaPredicted RBP8.47□□□□□ -1.05
TMEM116-209ENST00000550020 PLEKHA8Q96JA3 519 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 DHRS1Q96LJ7 313 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 FNDC11Q9BVV2 318 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 PINK1Q9BXM7 581 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 NKX2-4Q9H2Z4 354 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 SRMSQ9H3Y6 488 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 ANKRD19PQ9H560 264 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 NMNAT1Q9HAN9 279 aaPredicted RBP8.47□□□□□ -1.05
TMEM116-209ENST00000550020 LTB4R2Q9NPC1 389 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms