RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 N6AMT1Q9Y5N5 214 aa10.55□□□□□ -0.72
LINC00661-204ENST00000549354 KCNE1BA0A087WTH5 132 aa10.55□□□□□ -0.72
LINC00661-204ENST00000549354 C1QTNF3-AMACRE9PGA6 284 aa10.55□□□□□ -0.72
LINC00661-204ENST00000549354 ZW10O43264 779 aa10.55□□□□□ -0.72
LINC00661-204ENST00000549354 DYRK3O43781 588 aa10.55□□□□□ -0.72
LINC00661-204ENST00000549354 ATG13O75143 517 aa10.55□□□□□ -0.72
LINC00661-204ENST00000549354 PEPDP12955 493 aa10.55□□□□□ -0.72
LINC00661-204ENST00000549354 TNFRSF4P43489 277 aa10.55□□□□□ -0.72
LINC00661-204ENST00000549354 WNT3P56703 355 aa10.55□□□□□ -0.72
LINC00661-204ENST00000549354 KCNJ10P78508 379 aa10.55□□□□□ -0.72
LINC00661-204ENST00000549354 ALDH6A1Q02252 535 aaKnown RBP10.55□□□□□ -0.72
LINC00661-204ENST00000549354 SLBPQ14493 270 aaKnown RBP eCLIP10.55□□□□□ -0.72
LINC00661-204ENST00000549354 IRF3Q14653 427 aa10.55□□□□□ -0.72
LINC00661-204ENST00000549354 ITPRIPL2Q3MIP1 535 aa10.55□□□□□ -0.72
LINC00661-204ENST00000549354 C10orf62Q5T681 223 aaPredicted RBP10.55□□□□□ -0.72
LINC00661-204ENST00000549354 THOC7Q6I9Y2 204 aaKnown RBP10.55□□□□□ -0.72
LINC00661-204ENST00000549354 TYW3Q6IPR3 259 aaKnown RBP10.55□□□□□ -0.72
LINC00661-204ENST00000549354 PARM1Q6UWI2 310 aa10.55□□□□□ -0.72
LINC00661-204ENST00000549354 USP43Q70EL4 1123 aa10.55□□□□□ -0.72
LINC00661-204ENST00000549354 YAF2Q8IY57 180 aa10.55□□□□□ -0.72
LINC00661-204ENST00000549354 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.55□□□□□ -0.72
LINC00661-204ENST00000549354 L3MBTL4Q8NA19 623 aa10.55□□□□□ -0.72
LINC00661-204ENST00000549354 AQP11Q8NBQ7 271 aa10.55□□□□□ -0.72
LINC00661-204ENST00000549354 NLGN4YQ8NFZ3 816 aaPredicted RBP10.55□□□□□ -0.72
LINC00661-204ENST00000549354 MYDGFQ969H8 173 aa10.55□□□□□ -0.72
LINC00661-204ENST00000549354 NUS1Q96E22 293 aa10.55□□□□□ -0.72
LINC00661-204ENST00000549354 RSPH9Q9H1X1 276 aaPredicted RBP10.55□□□□□ -0.72
LINC00661-204ENST00000549354 ZNF556Q9HAH1 456 aa10.55□□□□□ -0.72
LINC00661-204ENST00000549354 TM7SF3Q9NS93 570 aa10.55□□□□□ -0.72
LINC00661-204ENST00000549354 NDUFAF4Q9P032 175 aa10.55□□□□□ -0.72
LINC00661-204ENST00000549354 KLHL3Q9UH77 587 aa10.55□□□□□ -0.72
LINC00661-204ENST00000549354 YARS2Q9Y2Z4 477 aaKnown RBP10.55□□□□□ -0.72
LINC00661-204ENST00000549354 CABIN1Q9Y6J0 2220 aa10.55□□□□□ -0.72
LINC00661-204ENST00000549354 BCHEP06276 602 aa10.55□□□□□ -0.72
LINC00661-204ENST00000549354 PRPS2P11908 318 aa10.55□□□□□ -0.72
LINC00661-204ENST00000549354 C6P13671 934 aa10.55□□□□□ -0.72
LINC00661-204ENST00000549354 P2RY2P41231 377 aa10.55□□□□□ -0.72
LINC00661-204ENST00000549354 SLC15A1P46059 708 aa10.55□□□□□ -0.72
LINC00661-204ENST00000549354 MAP4K2Q12851 820 aa10.55□□□□□ -0.72
LINC00661-204ENST00000549354 COL19A1Q14993 1142 aa10.55□□□□□ -0.72
LINC00661-204ENST00000549354 DUSP7Q16829 419 aa10.55□□□□□ -0.72
LINC00661-204ENST00000549354 PIP5KL1Q5T9C9 394 aa10.55□□□□□ -0.72
LINC00661-204ENST00000549354 RAET1GQ6H3X3 334 aa10.55□□□□□ -0.72
LINC00661-204ENST00000549354 CBLL1Q75N03 491 aa10.55□□□□□ -0.72
LINC00661-204ENST00000549354 DGLUCYQ7Z3D6 616 aa10.55□□□□□ -0.72
LINC00661-204ENST00000549354 OR5D16Q8NGK9 328 aa10.55□□□□□ -0.72
LINC00661-204ENST00000549354 FGF14Q92915 247 aa10.55□□□□□ -0.72
LINC00661-204ENST00000549354 FAM131CQ96AQ9 280 aa10.55□□□□□ -0.72
LINC00661-204ENST00000549354 MGLLQ99685 303 aa10.55□□□□□ -0.72
LINC00661-204ENST00000549354 TRMT61BQ9BVS5 477 aaKnown RBP10.55□□□□□ -0.72
LINC00661-204ENST00000549354 XKR8Q9H6D3 395 aa10.55□□□□□ -0.72
LINC00661-204ENST00000549354 STOX2Q9P2F5 926 aaPredicted RBP10.55□□□□□ -0.72
LINC00661-204ENST00000549354 GULP1Q9UBP9 304 aa10.55□□□□□ -0.72
LINC00661-204ENST00000549354 PSORS1C1Q9UIG5 152 aa10.55□□□□□ -0.72
LINC00661-204ENST00000549354 ASF1AQ9Y294 204 aa10.55□□□□□ -0.72
LINC00661-204ENST00000549354 LYVE1Q9Y5Y7 322 aa10.55□□□□□ -0.72
LINC00661-204ENST00000549354 EFCAB10A6NFE3 127 aa10.54□□□□□ -0.72
LINC00661-204ENST00000549354 H3BSH0 61 aa10.54□□□□□ -0.72
LINC00661-204ENST00000549354 TSC22D2O75157 780 aa10.54□□□□□ -0.72
LINC00661-204ENST00000549354 DDX5P17844 614 aaKnown RBP10.54□□□□□ -0.72
LINC00661-204ENST00000549354 BMP8BP34820 402 aa10.54□□□□□ -0.72
LINC00661-204ENST00000549354 SLC5A12Q1EHB4 618 aa10.54□□□□□ -0.72
LINC00661-204ENST00000549354 ZNF750Q32MQ0 723 aa10.54□□□□□ -0.72
LINC00661-204ENST00000549354 FAM46CQ5VWP2 391 aa10.54□□□□□ -0.72
LINC00661-204ENST00000549354 CCDC80Q76M96 950 aa10.54□□□□□ -0.72
LINC00661-204ENST00000549354 SLC46A3Q7Z3Q1 461 aa10.54□□□□□ -0.72
LINC00661-204ENST00000549354 ABI3BPQ7Z7G0 1075 aa10.54□□□□□ -0.72
LINC00661-204ENST00000549354 GPR151Q8TDV0 419 aa10.54□□□□□ -0.72
LINC00661-204ENST00000549354 FBLIM1Q8WUP2 373 aa10.54□□□□□ -0.72
LINC00661-204ENST00000549354 HRASLS5Q96KN8 279 aa10.54□□□□□ -0.72
LINC00661-204ENST00000549354 C7orf34Q96L11 122 aa10.54□□□□□ -0.72
LINC00661-204ENST00000549354 MAGEB10Q96LZ2 347 aaPredicted RBP10.54□□□□□ -0.72
LINC00661-204ENST00000549354 CPNE5Q9HCH3 593 aa10.54□□□□□ -0.72
LINC00661-204ENST00000549354 PAQR5Q9NXK6 330 aaPredicted RBP10.54□□□□□ -0.72
LINC00661-204ENST00000549354 TVP23BQ9NYZ1 205 aa10.54□□□□□ -0.72
LINC00661-204ENST00000549354 PCDHGB3Q9Y5G1 929 aa10.54□□□□□ -0.72
LINC00661-204ENST00000549354 C17orf113A0A1B0GUU1 675 aa10.54□□□□□ -0.72
LINC00661-204ENST00000549354 CLDN24A6NM45 220 aa10.54□□□□□ -0.72
LINC00661-204ENST00000549354 C5orf58C9J3I9 102 aa10.54□□□□□ -0.72
LINC00661-204ENST00000549354 DNAJB5O75953 348 aa10.54□□□□□ -0.72
LINC00661-204ENST00000549354 APODP05090 189 aa10.54□□□□□ -0.72
LINC00661-204ENST00000549354 CDK1P06493 297 aa10.54□□□□□ -0.72
LINC00661-204ENST00000549354 PRPS1L1P21108 318 aa10.54□□□□□ -0.72
LINC00661-204ENST00000549354 PRPH2P23942 346 aa10.54□□□□□ -0.72
LINC00661-204ENST00000549354 CD83Q01151 205 aa10.54□□□□□ -0.72
LINC00661-204ENST00000549354 NFE2L1Q14494 772 aa10.54□□□□□ -0.72
LINC00661-204ENST00000549354 LIPKQ5VXJ0 399 aa10.54□□□□□ -0.72
LINC00661-204ENST00000549354 TSEN54Q7Z6J9 526 aaKnown RBP10.54□□□□□ -0.72
LINC00661-204ENST00000549354 LAX1Q8IWV1 398 aa10.54□□□□□ -0.72
LINC00661-204ENST00000549354 OR7G3Q8NG95 312 aa10.54□□□□□ -0.72
LINC00661-204ENST00000549354 OR9Q1Q8NGQ5 310 aa10.54□□□□□ -0.72
LINC00661-204ENST00000549354 DNAJA3Q96EY1 480 aa10.54□□□□□ -0.72
LINC00661-204ENST00000549354 COX14Q96I36 57 aa10.54□□□□□ -0.72
LINC00661-204ENST00000549354 OR4K3Q96R72 315 aa10.54□□□□□ -0.72
LINC00661-204ENST00000549354 KXD1Q9BQD3 176 aa10.54□□□□□ -0.72
LINC00661-204ENST00000549354 WFDC6Q9BQY6 131 aa10.54□□□□□ -0.72
LINC00661-204ENST00000549354 FBXL12Q9NXK8 326 aa10.54□□□□□ -0.72
LINC00661-204ENST00000549354 ZNF226Q9NYT6 803 aa10.54□□□□□ -0.72
LINC00661-204ENST00000549354 ZNF221Q9UK13 617 aa10.54□□□□□ -0.72
LINC00661-204ENST00000549354 WBP11Q9Y2W2 641 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms