RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 ERAL1O75616 437 aaKnown RBP19.74■□□□□ 0.75
CACNB3-210ENST00000548874 SLC35E2P0CK97 266 aa19.74■□□□□ 0.75
CACNB3-210ENST00000548874 COX6A1P12074 109 aa19.74■□□□□ 0.75
CACNB3-210ENST00000548874 CPMP14384 443 aa19.74■□□□□ 0.75
CACNB3-210ENST00000548874 STT3AP46977 705 aa19.74■□□□□ 0.75
CACNB3-210ENST00000548874 XKP51811 444 aa19.74■□□□□ 0.75
CACNB3-210ENST00000548874 OR4D2P58180 307 aa19.74■□□□□ 0.75
CACNB3-210ENST00000548874 IRX1P78414 480 aaPredicted RBP19.74■□□□□ 0.75
CACNB3-210ENST00000548874 SF3A3Q12874 501 aaKnown RBP eCLIP19.74■□□□□ 0.75
CACNB3-210ENST00000548874 PCOLCEQ15113 449 aa19.74■□□□□ 0.75
CACNB3-210ENST00000548874 ZNF385BQ569K4 471 aa19.74■□□□□ 0.75
CACNB3-210ENST00000548874 SFT2D3Q587I9 215 aa19.74■□□□□ 0.75
CACNB3-210ENST00000548874 METTL21CQ5VZV1 264 aa19.74■□□□□ 0.75
CACNB3-210ENST00000548874 SPATA21Q7Z572 469 aa19.74■□□□□ 0.75
CACNB3-210ENST00000548874 CAMKMTQ7Z624 323 aa19.74■□□□□ 0.75
CACNB3-210ENST00000548874 CPLX4Q7Z7G2 160 aa19.74■□□□□ 0.75
CACNB3-210ENST00000548874 SAMD14Q8IZD0 417 aaPredicted RBP19.74■□□□□ 0.75
CACNB3-210ENST00000548874 THAP4Q8WY91 577 aa19.74■□□□□ 0.75
CACNB3-210ENST00000548874 EXOSC8Q96B26 276 aaKnown RBP19.74■□□□□ 0.75
CACNB3-210ENST00000548874 PPCDCQ96CD2 204 aa19.74■□□□□ 0.75
CACNB3-210ENST00000548874 CATSPER2Q96P56 530 aa19.74■□□□□ 0.75
CACNB3-210ENST00000548874 ELAC2Q9BQ52 826 aaKnown RBP19.74■□□□□ 0.75
CACNB3-210ENST00000548874 DPY30Q9C005 99 aa19.74■□□□□ 0.75
CACNB3-210ENST00000548874 FAM107BQ9H098 131 aa19.74■□□□□ 0.75
CACNB3-210ENST00000548874 ZNF700Q9H0M5 742 aa19.74■□□□□ 0.75
CACNB3-210ENST00000548874 P4HTMQ9NXG6 502 aa19.74■□□□□ 0.75
CACNB3-210ENST00000548874 G3BP2Q9UN86 482 aaKnown RBP19.74■□□□□ 0.75
CACNB3-210ENST00000548874 MYOCOSA0A1B0GUC4 107 aa19.73■□□□□ 0.75
CACNB3-210ENST00000548874 K7ENP7 123 aa19.73■□□□□ 0.75
CACNB3-210ENST00000548874 SNX3O60493 162 aa19.73■□□□□ 0.75
CACNB3-210ENST00000548874 PRKAR1AP10644 381 aa19.73■□□□□ 0.75
CACNB3-210ENST00000548874 CSNK2A2P19784 350 aaPredicted RBP19.73■□□□□ 0.75
CACNB3-210ENST00000548874 ATP4BP51164 291 aa19.73■□□□□ 0.75
CACNB3-210ENST00000548874 UFM1P61960 85 aa19.73■□□□□ 0.75
CACNB3-210ENST00000548874 PLIN5Q00G26 463 aa19.73■□□□□ 0.75
CACNB3-210ENST00000548874 EEF1A2Q05639 463 aaKnown RBP19.73■□□□□ 0.75
CACNB3-210ENST00000548874 DUSP2Q05923 314 aa19.73■□□□□ 0.75
CACNB3-210ENST00000548874 ATP1A4Q13733 1029 aa19.73■□□□□ 0.75
CACNB3-210ENST00000548874 ELAVL1Q15717 326 aaKnown RBP19.73■□□□□ 0.75
CACNB3-210ENST00000548874 MPEG1Q2M385 716 aa19.73■□□□□ 0.75
CACNB3-210ENST00000548874 ZNF750Q32MQ0 723 aa19.73■□□□□ 0.75
CACNB3-210ENST00000548874 ANKRD26P1Q6NSI1 321 aa19.73■□□□□ 0.75
CACNB3-210ENST00000548874 INO80CQ6PI98 192 aaPredicted RBP19.73■□□□□ 0.75
CACNB3-210ENST00000548874 ST13P4Q8IZP2 240 aaPredicted RBP19.73■□□□□ 0.75
CACNB3-210ENST00000548874 ZSCAN1Q8NBB4 408 aa19.73■□□□□ 0.75
CACNB3-210ENST00000548874 OR7A2PQ8NGA2 310 aa19.73■□□□□ 0.75
CACNB3-210ENST00000548874 NUDT8Q8WV74 236 aa19.73■□□□□ 0.75
CACNB3-210ENST00000548874 TESCQ96BS2 214 aa19.73■□□□□ 0.75
CACNB3-210ENST00000548874 COQ8BQ96D53 544 aa19.73■□□□□ 0.75
CACNB3-210ENST00000548874 VPS50Q96JG6 964 aa19.73■□□□□ 0.75
CACNB3-210ENST00000548874 TEX37Q96LM6 180 aa19.73■□□□□ 0.75
CACNB3-210ENST00000548874 PELOQ9BRX2 385 aaKnown RBP19.73■□□□□ 0.75
CACNB3-210ENST00000548874 ZNF385DQ9H6B1 395 aa19.73■□□□□ 0.75
CACNB3-210ENST00000548874 ADAP2Q9NPF8 381 aa19.73■□□□□ 0.75
CACNB3-210ENST00000548874 ZIM2Q9NZV7 527 aa19.73■□□□□ 0.75
CACNB3-210ENST00000548874 COPG1Q9Y678 874 aaKnown RBP19.73■□□□□ 0.75
CACNB3-210ENST00000548874 ZNF780BQ9Y6R6 833 aa19.73■□□□□ 0.75
CACNB3-210ENST00000548874 IGHV3-20A0A0C4DH32 117 aa19.72■□□□□ 0.75
CACNB3-210ENST00000548874 MYO1GB0I1T2 1018 aa19.72■□□□□ 0.75
CACNB3-210ENST00000548874 COX7A2P14406 83 aa19.72■□□□□ 0.75
CACNB3-210ENST00000548874 PORP16435 677 aaPredicted RBP19.72■□□□□ 0.75
CACNB3-210ENST00000548874 GALNSP34059 522 aa19.72■□□□□ 0.75
CACNB3-210ENST00000548874 CLNS1AP54105 237 aaKnown RBP19.72■□□□□ 0.75
CACNB3-210ENST00000548874 TMPRSS3P57727 454 aa19.72■□□□□ 0.75
CACNB3-210ENST00000548874 RPS6KA2Q15349 733 aa19.72■□□□□ 0.75
CACNB3-210ENST00000548874 TERF2Q15554 542 aa19.72■□□□□ 0.75
CACNB3-210ENST00000548874 FAM180BQ6P0A1 224 aa19.72■□□□□ 0.75
CACNB3-210ENST00000548874 SNRNP27Q8WVK2 155 aaKnown RBP19.72■□□□□ 0.75
CACNB3-210ENST00000548874 DGAT2Q96PD7 388 aa19.72■□□□□ 0.75
CACNB3-210ENST00000548874 CLMPQ9H6B4 373 aa19.72■□□□□ 0.75
CACNB3-210ENST00000548874 CPNE5Q9HCH3 593 aa19.72■□□□□ 0.75
CACNB3-210ENST00000548874 GIMAP4Q9NUV9 329 aa19.72■□□□□ 0.75
CACNB3-210ENST00000548874 FBXL4Q9UKA2 621 aa19.72■□□□□ 0.75
CACNB3-210ENST00000548874 ZMIZ1Q9ULJ6 1067 aa19.72■□□□□ 0.75
CACNB3-210ENST00000548874 TRIM33Q9UPN9 1127 aa19.72■□□□□ 0.75
CACNB3-210ENST00000548874 ENTPD4Q9Y227 616 aa19.72■□□□□ 0.75
CACNB3-210ENST00000548874 PEX12O00623 359 aa19.71■□□□□ 0.75
CACNB3-210ENST00000548874 HPP00738 406 aa19.71■□□□□ 0.75
CACNB3-210ENST00000548874 IFNA16P05015 189 aa19.71■□□□□ 0.75
CACNB3-210ENST00000548874 ATP1B1P05026 303 aa19.71■□□□□ 0.75
CACNB3-210ENST00000548874 LAMP1P11279 417 aa19.71■□□□□ 0.75
CACNB3-210ENST00000548874 DDX5P17844 614 aaKnown RBP19.71■□□□□ 0.75
CACNB3-210ENST00000548874 GPX3P22352 226 aa19.71■□□□□ 0.75
CACNB3-210ENST00000548874 IL12AP29459 219 aa19.71■□□□□ 0.75
CACNB3-210ENST00000548874 FEN1P39748 380 aaKnown RBP19.71■□□□□ 0.75
CACNB3-210ENST00000548874 FRKP42685 505 aaPredicted RBP19.71■□□□□ 0.75
CACNB3-210ENST00000548874 NME5P56597 212 aa19.71■□□□□ 0.75
CACNB3-210ENST00000548874 CPTPQ5TA50 214 aa19.71■□□□□ 0.75
CACNB3-210ENST00000548874 PAPD4Q6PIY7 484 aaKnown RBP19.71■□□□□ 0.75
CACNB3-210ENST00000548874 DGAT2L6Q6ZPD8 337 aa19.71■□□□□ 0.75
CACNB3-210ENST00000548874 NDUFAF7Q7L592 441 aa19.71■□□□□ 0.75
CACNB3-210ENST00000548874 PIGWQ7Z7B1 504 aa19.71■□□□□ 0.75
CACNB3-210ENST00000548874 MIER2Q8N344 545 aa19.71■□□□□ 0.75
CACNB3-210ENST00000548874 LRRC25Q8N386 305 aaPredicted RBP19.71■□□□□ 0.75
CACNB3-210ENST00000548874 SUN3Q8TAQ9 357 aa19.71■□□□□ 0.75
CACNB3-210ENST00000548874 PTPMT1Q8WUK0 201 aaPredicted RBP19.71■□□□□ 0.75
CACNB3-210ENST00000548874 RBM18Q96H35 190 aaKnown RBP19.71■□□□□ 0.75
CACNB3-210ENST00000548874 IMMP1LQ96LU5 166 aa19.71■□□□□ 0.75
CACNB3-210ENST00000548874 PRPF18Q99633 342 aaKnown RBP19.71■□□□□ 0.75
CACNB3-210ENST00000548874 LPAR4Q99677 370 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms