RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 PAQR5Q9NXK6 330 aaPredicted RBP9.39□□□□□ -0.91
SMARCD1-205ENST00000548573 PLEKHB1Q9UF11 243 aaPredicted RBP9.39□□□□□ -0.91
SMARCD1-205ENST00000548573 TESQ9UGI8 421 aaKnown RBP9.39□□□□□ -0.91
SMARCD1-205ENST00000548573 MAFFQ9ULX9 164 aa9.39□□□□□ -0.91
SMARCD1-205ENST00000548573 SH2B3Q9UQQ2 575 aa9.39□□□□□ -0.91
SMARCD1-205ENST00000548573 A0A1W2PQL4 384 aaPredicted RBP9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 A8MV72 311 aaPredicted RBP9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 B4DXG7 233 aa9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 LEFTY2O00292 366 aa9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 WWP2O00308 870 aa9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 TFECO14948 347 aaPredicted RBP9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 TBX19O60806 448 aa9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 TP53P04637 393 aaPredicted RBP9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 IGFBP1P08833 259 aaPredicted RBP9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 MSL3P1P0C860 447 aa9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 MYL9P24844 172 aa9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 HLA-DMAP28067 261 aa9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 RECQLP46063 649 aaPredicted RBP9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 KCNJ5P48544 419 aa9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 RACK1P63244 317 aaKnown RBP9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 CHRNEQ04844 493 aa9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 DMPKQ09013 629 aa9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 COX10Q12887 443 aa9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 FOXD4Q12950 439 aaPredicted RBP9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 HNRNPA0Q13151 305 aaKnown RBP9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 ZNF658BQ4V348 819 aaPredicted RBP9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 YIF1BQ5BJH7 314 aa9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 RPS26P11Q5JNZ5 115 aaPredicted RBP9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 IER5LQ5T953 404 aa9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 KIAA1211LQ6NV74 962 aa9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 TMEM220Q6QAJ8 160 aa9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 CD300LDQ6UXZ3 194 aa9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 USP30Q70CQ3 517 aa9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 GAREM2Q75VX8 874 aa9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 TECPR1Q7Z6L1 1165 aa9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 LRRC56Q8IYG6 542 aaPredicted RBP9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 GPR65Q8IYL9 337 aa9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 HORMAD2Q8N7B1 307 aa9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 OR52I1Q8NGK6 324 aa9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 AP3S1Q92572 193 aa9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 TRIM63Q969Q1 353 aa9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 TMEM19Q96HH6 336 aa9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 DIRAS2Q96HU8 199 aa9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 FRMD6Q96NE9 622 aa9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 TTYH2Q9BSA4 534 aa9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 C11orf54Q9H0W9 315 aaPredicted RBP9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 RNF121Q9H920 327 aa9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 RRAGCQ9HB90 399 aa9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 RNF186Q9NXI6 227 aa9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 MAU2Q9Y6X3 613 aa9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 TRAV19A0A0A6YYK7 116 aa9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 IRGMA1A4Y4 181 aa9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 PLD2O14939 933 aa9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 POLR1CO15160 346 aaPredicted RBP9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 TMCC2O75069 709 aa9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 TIMP2P16035 220 aa9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 DDCP20711 480 aa9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 OPRD1P41143 372 aa9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 TGM4P49221 684 aa9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 CAP1Q01518 475 aa9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 TAP2Q03519 686 aa9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 MXD1Q05195 221 aa9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 TARDBPQ13148 414 aaKnown RBP eCLIP9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 NDUFA9Q16795 377 aa9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 PLK5Q496M5 336 aa9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 C3orf38Q5JPI3 329 aa9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 ASTLQ6HA08 431 aaPredicted RBP9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 PAQR6Q6TCH4 344 aa9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 UTS2BQ765I0 119 aa9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 ZNF438Q7Z4V0 828 aa9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 WDR53Q7Z5U6 358 aaPredicted RBP9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 LIX1LQ8IVB5 337 aa9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 LINC00471Q8N535 108 aa9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 OR9A1PQ8NGU1 263 aa9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 KCTD7Q96MP8 289 aa9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 ZIC5Q96T25 663 aa9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 NEUROD4Q9HD90 331 aa9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 ISYNA1Q9NPH2 558 aa9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 SEMA3GQ9NS98 782 aa9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 MRPS18AQ9NVS2 196 aaKnown RBP9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 AHSPQ9NZD4 102 aa9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 SPG21Q9NZD8 308 aa9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 NUFIP1Q9UHK0 495 aaKnown RBP9.38□□□□□ -0.91
SMARCD1-205ENST00000548573 KIF26AQ9ULI4 1882 aaPredicted RBP9.37□□□□□ -0.91
SMARCD1-205ENST00000548573 LINC00854A0A1B0GVQ3 168 aa9.37□□□□□ -0.91
SMARCD1-205ENST00000548573 ANKDD1BA6NHY2 528 aa9.37□□□□□ -0.91
SMARCD1-205ENST00000548573 PRKYO43930 277 aa9.37□□□□□ -0.91
SMARCD1-205ENST00000548573 MMP20O60882 483 aa9.37□□□□□ -0.91
SMARCD1-205ENST00000548573 TRIM3O75382 744 aaPredicted RBP9.37□□□□□ -0.91
SMARCD1-205ENST00000548573 HLA-DQB1P01920 261 aa9.37□□□□□ -0.91
SMARCD1-205ENST00000548573 NR2F6P10588 404 aa9.37□□□□□ -0.91
SMARCD1-205ENST00000548573 ACADMP11310 421 aa9.37□□□□□ -0.91
SMARCD1-205ENST00000548573 CPN2P22792 545 aa9.37□□□□□ -0.91
SMARCD1-205ENST00000548573 PBLDP30039 288 aaPredicted RBP9.37□□□□□ -0.91
SMARCD1-205ENST00000548573 WNT4P56705 351 aa9.37□□□□□ -0.91
SMARCD1-205ENST00000548573 DAB2P98082 770 aa9.37□□□□□ -0.91
SMARCD1-205ENST00000548573 EFNB1P98172 346 aa9.37□□□□□ -0.91
SMARCD1-205ENST00000548573 CNTN1Q12860 1018 aa9.37□□□□□ -0.91
SMARCD1-205ENST00000548573 CAMK2BQ13554 666 aa9.37□□□□□ -0.91
SMARCD1-205ENST00000548573 KLHL22Q53GT1 634 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms