RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 IL23RQ5VWK5 629 aa11.35□□□□□ -0.59
HDAC7-226ENST00000547259 GALNT18Q6P9A2 607 aa11.35□□□□□ -0.59
HDAC7-226ENST00000547259 FAM198BQ6UWH4 519 aa11.35□□□□□ -0.59
HDAC7-226ENST00000547259 PARP9Q8IXQ6 854 aa11.35□□□□□ -0.59
HDAC7-226ENST00000547259 SLC34A3Q8N130 599 aa11.35□□□□□ -0.59
HDAC7-226ENST00000547259 LIX1Q8N485 282 aa11.35□□□□□ -0.59
HDAC7-226ENST00000547259 ADAMTS18Q8TE60 1221 aa11.35□□□□□ -0.59
HDAC7-226ENST00000547259 C11orf24Q96F05 449 aaPredicted RBP11.35□□□□□ -0.59
HDAC7-226ENST00000547259 MARK4Q96L34 752 aa11.35□□□□□ -0.59
HDAC7-226ENST00000547259 MAPKAP1Q9BPZ7 522 aa11.35□□□□□ -0.59
HDAC7-226ENST00000547259 CLK4Q9HAZ1 481 aaKnown RBP11.35□□□□□ -0.59
HDAC7-226ENST00000547259 ATP13A2Q9NQ11 1180 aa11.35□□□□□ -0.59
HDAC7-226ENST00000547259 ASIC5Q9NY37 505 aa11.35□□□□□ -0.59
HDAC7-226ENST00000547259 DAPP1Q9UN19 280 aa11.35□□□□□ -0.59
HDAC7-226ENST00000547259 TRIM33Q9UPN9 1127 aa11.35□□□□□ -0.59
HDAC7-226ENST00000547259 DOCK10Q96BY6 2186 aa11.35□□□□□ -0.59
HDAC7-226ENST00000547259 ANKUB1A6NFN9 424 aa11.34□□□□□ -0.59
HDAC7-226ENST00000547259 PSMD12O00232 456 aaPredicted RBP11.34□□□□□ -0.59
HDAC7-226ENST00000547259 CHST10O43529 356 aa11.34□□□□□ -0.59
HDAC7-226ENST00000547259 CBX6O95503 412 aa11.34□□□□□ -0.59
HDAC7-226ENST00000547259 FAM107AO95990 144 aa11.34□□□□□ -0.59
HDAC7-226ENST00000547259 IL3P08700 152 aa11.34□□□□□ -0.59
HDAC7-226ENST00000547259 ALDOCP09972 364 aaKnown RBP11.34□□□□□ -0.59
HDAC7-226ENST00000547259 BCKDHAP12694 445 aa11.34□□□□□ -0.59
HDAC7-226ENST00000547259 RNH1P13489 461 aaKnown RBP11.34□□□□□ -0.59
HDAC7-226ENST00000547259 CPN2P22792 545 aa11.34□□□□□ -0.59
HDAC7-226ENST00000547259 OTX2P32243 289 aa11.34□□□□□ -0.59
HDAC7-226ENST00000547259 BUD31P41223 144 aaPredicted RBP11.34□□□□□ -0.59
HDAC7-226ENST00000547259 GSTM5P46439 218 aa11.34□□□□□ -0.59
HDAC7-226ENST00000547259 ASMTP46597 345 aa11.34□□□□□ -0.59
HDAC7-226ENST00000547259 DIO3P55073 304 aa11.34□□□□□ -0.59
HDAC7-226ENST00000547259 LIM2P55344 173 aa11.34□□□□□ -0.59
HDAC7-226ENST00000547259 HNRNPH2P55795 449 aaKnown RBP11.34□□□□□ -0.59
HDAC7-226ENST00000547259 PER3P56645 1201 aa11.34□□□□□ -0.59
HDAC7-226ENST00000547259 TAS2R50P59544 299 aa11.34□□□□□ -0.59
HDAC7-226ENST00000547259 STX1BP61266 288 aa11.34□□□□□ -0.59
HDAC7-226ENST00000547259 TRA2BP62995 288 aaKnown RBP11.34□□□□□ -0.59
HDAC7-226ENST00000547259 TNFRSF17Q02223 184 aa11.34□□□□□ -0.59
HDAC7-226ENST00000547259 MRPL49Q13405 166 aaKnown RBP11.34□□□□□ -0.59
HDAC7-226ENST00000547259 RPS6KA2Q15349 733 aa11.34□□□□□ -0.59
HDAC7-226ENST00000547259 DCAF10Q5QP82 559 aa11.34□□□□□ -0.59
HDAC7-226ENST00000547259 GKAP1Q5VSY0 366 aaPredicted RBP11.34□□□□□ -0.59
HDAC7-226ENST00000547259 IRAK1BP1Q5VVH5 260 aa11.34□□□□□ -0.59
HDAC7-226ENST00000547259 MLIPQ5VWP3 458 aa11.34□□□□□ -0.59
HDAC7-226ENST00000547259 ZNF385CQ66K41 422 aaPredicted RBP11.34□□□□□ -0.59
HDAC7-226ENST00000547259 TMEM198Q66K66 360 aa11.34□□□□□ -0.59
HDAC7-226ENST00000547259 MRGPREQ86SM8 312 aa11.34□□□□□ -0.59
HDAC7-226ENST00000547259 GPR180Q86V85 440 aa11.34□□□□□ -0.59
HDAC7-226ENST00000547259 TMEM132CQ8N3T6 1108 aa11.34□□□□□ -0.59
HDAC7-226ENST00000547259 GALNT16Q8N428 558 aa11.34□□□□□ -0.59
HDAC7-226ENST00000547259 FAM47BQ8NA70 645 aa11.34□□□□□ -0.59
HDAC7-226ENST00000547259 OR51Q1Q8NH59 317 aa11.34□□□□□ -0.59
HDAC7-226ENST00000547259 CLHC1Q8NHS4 586 aa11.34□□□□□ -0.59
HDAC7-226ENST00000547259 C16orf78Q8WTQ4 265 aa11.34□□□□□ -0.59
HDAC7-226ENST00000547259 SNRNP40Q96DI7 357 aaKnown RBP11.34□□□□□ -0.59
HDAC7-226ENST00000547259 PEX11GQ96HA9 241 aa11.34□□□□□ -0.59
HDAC7-226ENST00000547259 TSSK3Q96PN8 268 aa11.34□□□□□ -0.59
HDAC7-226ENST00000547259 RBCK1Q9BYM8 510 aa11.34□□□□□ -0.59
HDAC7-226ENST00000547259 LYRM4Q9HD34 91 aa11.34□□□□□ -0.59
HDAC7-226ENST00000547259 MYNNQ9NPC7 610 aa11.34□□□□□ -0.59
HDAC7-226ENST00000547259 AIG1Q9NVV5 245 aa11.34□□□□□ -0.59
HDAC7-226ENST00000547259 IFT80Q9P2H3 777 aaPredicted RBP11.34□□□□□ -0.59
HDAC7-226ENST00000547259 TRPC4Q9UBN4 977 aa11.34□□□□□ -0.59
HDAC7-226ENST00000547259 COPG1Q9Y678 874 aaKnown RBP11.34□□□□□ -0.59
HDAC7-226ENST00000547259 SCN2AQ99250 2005 aa11.34□□□□□ -0.59
HDAC7-226ENST00000547259 A1L4Q6 167 aa11.33□□□□□ -0.6
HDAC7-226ENST00000547259 NDUFAB1O14561 156 aa11.33□□□□□ -0.6
HDAC7-226ENST00000547259 DNAJB6O75190 326 aa11.33□□□□□ -0.6
HDAC7-226ENST00000547259 KLF7O75840 302 aaPredicted RBP11.33□□□□□ -0.6
HDAC7-226ENST00000547259 LDLRP01130 860 aa11.33□□□□□ -0.6
HDAC7-226ENST00000547259 NR2F6P10588 404 aa11.33□□□□□ -0.6
HDAC7-226ENST00000547259 G6PDP11413 515 aa11.33□□□□□ -0.6
HDAC7-226ENST00000547259 IDO1P14902 403 aa11.33□□□□□ -0.6
HDAC7-226ENST00000547259 NCF2P19878 526 aaPredicted RBP11.33□□□□□ -0.6
HDAC7-226ENST00000547259 TACR1P25103 407 aa11.33□□□□□ -0.6
HDAC7-226ENST00000547259 TLX1P31314 330 aaPredicted RBP11.33□□□□□ -0.6
HDAC7-226ENST00000547259 XCR1P46094 333 aa11.33□□□□□ -0.6
HDAC7-226ENST00000547259 ALDH9A1P49189 494 aa11.33□□□□□ -0.6
HDAC7-226ENST00000547259 CBX1P83916 185 aa11.33□□□□□ -0.6
HDAC7-226ENST00000547259 OCA2Q04671 838 aa11.33□□□□□ -0.6
HDAC7-226ENST00000547259 KLC1Q07866 573 aa11.33□□□□□ -0.6
HDAC7-226ENST00000547259 PTGR1Q14914 329 aa11.33□□□□□ -0.6
HDAC7-226ENST00000547259 GSTA3Q16772 222 aa11.33□□□□□ -0.6
HDAC7-226ENST00000547259 PLEKHN1Q494U1 663 aaPredicted RBP11.33□□□□□ -0.6
HDAC7-226ENST00000547259 MFSD4BQ5TF39 518 aa11.33□□□□□ -0.6
HDAC7-226ENST00000547259 MRM1Q6IN84 353 aaKnown RBP11.33□□□□□ -0.6
HDAC7-226ENST00000547259 LCN10Q6JVE6 187 aa11.33□□□□□ -0.6
HDAC7-226ENST00000547259 RIPOR1Q6ZS17 1223 aa11.33□□□□□ -0.6
HDAC7-226ENST00000547259 IKBIPQ70UQ0 350 aa11.33□□□□□ -0.6
HDAC7-226ENST00000547259 COX15Q7KZN9 410 aa11.33□□□□□ -0.6
HDAC7-226ENST00000547259 FAM9CQ8IZT9 166 aa11.33□□□□□ -0.6
HDAC7-226ENST00000547259 CISD2Q8N5K1 135 aaKnown RBP11.33□□□□□ -0.6
HDAC7-226ENST00000547259 OR2Y1Q8NGV0 311 aa11.33□□□□□ -0.6
HDAC7-226ENST00000547259 BCAS4Q8TDM0 211 aa11.33□□□□□ -0.6
HDAC7-226ENST00000547259 FKBP10Q96AY3 582 aa11.33□□□□□ -0.6
HDAC7-226ENST00000547259 CSF3RQ99062 836 aa11.33□□□□□ -0.6
HDAC7-226ENST00000547259 FAIM2Q9BWQ8 316 aa11.33□□□□□ -0.6
HDAC7-226ENST00000547259 RUBCNLQ9H714 662 aa11.33□□□□□ -0.6
HDAC7-226ENST00000547259 WDR41Q9HAD4 459 aa11.33□□□□□ -0.6
HDAC7-226ENST00000547259 MKKSQ9NPJ1 570 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms