RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 ZNF71Q9NQZ8 489 aaPredicted RBP15.7■□□□□ 0.1
CCDC38-203ENST00000546803 INTS9Q9NV88 658 aaKnown RBP15.7■□□□□ 0.1
CCDC38-203ENST00000546803 POLR3HQ9Y535 204 aaPredicted RBP15.7■□□□□ 0.1
CCDC38-203ENST00000546803 ZFHX4Q86UP3 3567 aa15.7■□□□□ 0.1
CCDC38-203ENST00000546803 MYOCOSA0A1B0GUC4 107 aa15.69■□□□□ 0.1
CCDC38-203ENST00000546803 SLCO1B7G3V0H7 640 aa15.69■□□□□ 0.1
CCDC38-203ENST00000546803 DPM1O60762 260 aa15.69■□□□□ 0.1
CCDC38-203ENST00000546803 PDGFAP04085 211 aa15.69■□□□□ 0.1
CCDC38-203ENST00000546803 CSNK2A2P19784 350 aaPredicted RBP15.69■□□□□ 0.1
CCDC38-203ENST00000546803 MAPK1P28482 360 aa15.69■□□□□ 0.1
CCDC38-203ENST00000546803 SOX11P35716 441 aa15.69■□□□□ 0.1
CCDC38-203ENST00000546803 ALDH9A1P49189 494 aa15.69■□□□□ 0.1
CCDC38-203ENST00000546803 CLCN2P51788 898 aa15.69■□□□□ 0.1
CCDC38-203ENST00000546803 GPR143P51810 404 aa15.69■□□□□ 0.1
CCDC38-203ENST00000546803 XKP51811 444 aa15.69■□□□□ 0.1
CCDC38-203ENST00000546803 RPL38P63173 70 aaKnown RBP15.69■□□□□ 0.1
CCDC38-203ENST00000546803 OCRLQ01968 901 aa15.69■□□□□ 0.1
CCDC38-203ENST00000546803 MFAP5Q13361 173 aa15.69■□□□□ 0.1
CCDC38-203ENST00000546803 PDCD2Q16342 344 aaPredicted RBP15.69■□□□□ 0.1
CCDC38-203ENST00000546803 GALNTL6Q49A17 601 aa15.69■□□□□ 0.1
CCDC38-203ENST00000546803 HSP90B2PQ58FF3 399 aa15.69■□□□□ 0.1
CCDC38-203ENST00000546803 FAM71E1Q6IPT2 247 aa15.69■□□□□ 0.1
CCDC38-203ENST00000546803 IGFL2Q6UWQ7 119 aa15.69■□□□□ 0.1
CCDC38-203ENST00000546803 MMP21Q8N119 569 aa15.69■□□□□ 0.1
CCDC38-203ENST00000546803 LGI4Q8N135 537 aa15.69■□□□□ 0.1
CCDC38-203ENST00000546803 APCDD1LQ8NCL9 501 aa15.69■□□□□ 0.1
CCDC38-203ENST00000546803 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.69■□□□□ 0.1
CCDC38-203ENST00000546803 DYDC1Q8WWB3 177 aa15.69■□□□□ 0.1
CCDC38-203ENST00000546803 TUBGCP3Q96CW5 907 aa15.69■□□□□ 0.1
CCDC38-203ENST00000546803 ART5Q96L15 291 aa15.69■□□□□ 0.1
CCDC38-203ENST00000546803 ZNF354BQ96LW1 612 aa15.69■□□□□ 0.1
CCDC38-203ENST00000546803 C3orf30Q96M34 536 aa15.69■□□□□ 0.1
CCDC38-203ENST00000546803 EPS8L2Q9H6S3 715 aa15.69■□□□□ 0.1
CCDC38-203ENST00000546803 PTGFRNQ9P2B2 879 aa15.69■□□□□ 0.1
CCDC38-203ENST00000546803 HEY2Q9UBP5 337 aa15.69■□□□□ 0.1
CCDC38-203ENST00000546803 ZNF780BQ9Y6R6 833 aa15.69■□□□□ 0.1
CCDC38-203ENST00000546803 CFAP47Q6ZTR5 3102 aa15.69■□□□□ 0.1
CCDC38-203ENST00000546803 ATP6AP2A0A1C7CYW4 349 aa15.68■□□□□ 0.1
CCDC38-203ENST00000546803 A8MUI8 341 aa15.68■□□□□ 0.1
CCDC38-203ENST00000546803 CDK2AP1O14519 115 aa15.68■□□□□ 0.1
CCDC38-203ENST00000546803 PEX11AO75192 247 aa15.68■□□□□ 0.1
CCDC38-203ENST00000546803 VPS4BO75351 444 aa15.68■□□□□ 0.1
CCDC38-203ENST00000546803 ATP6AP2O75787 350 aa15.68■□□□□ 0.1
CCDC38-203ENST00000546803 CPMP14384 443 aa15.68■□□□□ 0.1
CCDC38-203ENST00000546803 PORP16435 677 aaPredicted RBP15.68■□□□□ 0.1
CCDC38-203ENST00000546803 NR1D1P20393 614 aa15.68■□□□□ 0.1
CCDC38-203ENST00000546803 DDCP20711 480 aa15.68■□□□□ 0.1
CCDC38-203ENST00000546803 C2orf80Q0P641 193 aa15.68■□□□□ 0.1
CCDC38-203ENST00000546803 SPRED3Q2MJR0 410 aa15.68■□□□□ 0.1
CCDC38-203ENST00000546803 SMU1Q2TAY7 513 aa15.68■□□□□ 0.1
CCDC38-203ENST00000546803 ABHD17BQ5VST6 288 aa15.68■□□□□ 0.1
CCDC38-203ENST00000546803 ZADH2Q8N4Q0 377 aa15.68■□□□□ 0.1
CCDC38-203ENST00000546803 SIRT6Q8N6T7 355 aa15.68■□□□□ 0.1
CCDC38-203ENST00000546803 OR1N1Q8NGS0 311 aa15.68■□□□□ 0.1
CCDC38-203ENST00000546803 LRRC8CQ8TDW0 803 aa15.68■□□□□ 0.1
CCDC38-203ENST00000546803 RIT1Q92963 219 aa15.68■□□□□ 0.1
CCDC38-203ENST00000546803 NCLNQ969V3 563 aa15.68■□□□□ 0.1
CCDC38-203ENST00000546803 PPWD1Q96BP3 646 aaKnown RBP15.68■□□□□ 0.1
CCDC38-203ENST00000546803 KLHL29Q96CT2 875 aa15.68■□□□□ 0.1
CCDC38-203ENST00000546803 DEFB126Q9BYW3 111 aa15.68■□□□□ 0.1
CCDC38-203ENST00000546803 PNPOQ9NVS9 261 aa15.68■□□□□ 0.1
CCDC38-203ENST00000546803 TAS2R7Q9NYW3 318 aa15.68■□□□□ 0.1
CCDC38-203ENST00000546803 RALYQ9UKM9 306 aaKnown RBP15.68■□□□□ 0.1
CCDC38-203ENST00000546803 UTS2RQ9UKP6 389 aa15.68■□□□□ 0.1
CCDC38-203ENST00000546803 LAMA5O15230 3695 aa15.68■□□□□ 0.1
CCDC38-203ENST00000546803 DSPP15924 2871 aaKnown RBP15.67■□□□□ 0.1
CCDC38-203ENST00000546803 HDAC3O15379 428 aa15.67■□□□□ 0.1
CCDC38-203ENST00000546803 ERAL1O75616 437 aaKnown RBP15.67■□□□□ 0.1
CCDC38-203ENST00000546803 DDAH2O95865 285 aa15.67■□□□□ 0.1
CCDC38-203ENST00000546803 SDC1P18827 310 aa15.67■□□□□ 0.1
CCDC38-203ENST00000546803 ASMTP46597 345 aa15.67■□□□□ 0.1
CCDC38-203ENST00000546803 MAD2L1Q13257 205 aaPredicted RBP15.67■□□□□ 0.1
CCDC38-203ENST00000546803 MEP1AQ16819 746 aa15.67■□□□□ 0.1
CCDC38-203ENST00000546803 C6orf136Q5SQH8 315 aa15.67■□□□□ 0.1
CCDC38-203ENST00000546803 B3GNTL1Q67FW5 361 aaPredicted RBP15.67■□□□□ 0.1
CCDC38-203ENST00000546803 LRRC34Q8IZ02 419 aa15.67■□□□□ 0.1
CCDC38-203ENST00000546803 KIF2BQ8N4N8 673 aa15.67■□□□□ 0.1
CCDC38-203ENST00000546803 AMER2Q8N7J2 671 aa15.67■□□□□ 0.1
CCDC38-203ENST00000546803 TEX19Q8NA77 164 aa15.67■□□□□ 0.1
CCDC38-203ENST00000546803 CDC26Q8NHZ8 85 aa15.67■□□□□ 0.1
CCDC38-203ENST00000546803 SLC2A12Q8TD20 617 aa15.67■□□□□ 0.1
CCDC38-203ENST00000546803 SENP5Q96HI0 755 aaPredicted RBP15.67■□□□□ 0.1
CCDC38-203ENST00000546803 FBXL20Q96IG2 436 aa15.67■□□□□ 0.1
CCDC38-203ENST00000546803 OR8D2Q9GZM6 311 aa15.67■□□□□ 0.1
CCDC38-203ENST00000546803 MED4Q9NPJ6 270 aa15.67■□□□□ 0.1
CCDC38-203ENST00000546803 MIEF1Q9NQG6 463 aa15.67■□□□□ 0.1
CCDC38-203ENST00000546803 GIMAP4Q9NUV9 329 aa15.67■□□□□ 0.1
CCDC38-203ENST00000546803 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.67■□□□□ 0.1
CCDC38-203ENST00000546803 STMN3Q9NZ72 180 aa15.67■□□□□ 0.1
CCDC38-203ENST00000546803 ABI3Q9P2A4 366 aa15.67■□□□□ 0.1
CCDC38-203ENST00000546803 COPS7AQ9UBW8 275 aa15.67■□□□□ 0.1
CCDC38-203ENST00000546803 NUP210LQ5VU65 1888 aa15.66■□□□□ 0.1
CCDC38-203ENST00000546803 TRBV11-1A0A0K0K1C0 115 aa15.66■□□□□ 0.1
CCDC38-203ENST00000546803 TRPC5OSA6NMA1 111 aa15.66■□□□□ 0.1
CCDC38-203ENST00000546803 ZFAND5O76080 213 aa15.66■□□□□ 0.1
CCDC38-203ENST00000546803 ATP1B1P05026 303 aa15.66■□□□□ 0.1
CCDC38-203ENST00000546803 JUNP05412 331 aaKnown RBP15.66■□□□□ 0.1
CCDC38-203ENST00000546803 PRPS2P11908 318 aa15.66■□□□□ 0.1
CCDC38-203ENST00000546803 BCKDHAP12694 445 aa15.66■□□□□ 0.1
CCDC38-203ENST00000546803 TACR1P25103 407 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms