RNA–Protein interactions for RNA: ENST00000546718.5

USP15-206, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-206ENST00000546718 WISP3O95389 354 aaPredicted RBP13.27□□□□□ -0.29
USP15-206ENST00000546718 INHBBP09529 407 aa13.27□□□□□ -0.29
USP15-206ENST00000546718 EPXP11678 715 aa13.27□□□□□ -0.29
USP15-206ENST00000546718 COX7A2P14406 83 aa13.27□□□□□ -0.29
USP15-206ENST00000546718 HIST1H1TP22492 207 aaPredicted RBP13.27□□□□□ -0.29
USP15-206ENST00000546718 GDF1P27539 372 aa13.27□□□□□ -0.29
USP15-206ENST00000546718 HSPA7P48741 367 aa13.27□□□□□ -0.29
USP15-206ENST00000546718 TGM3Q08188 693 aa13.27□□□□□ -0.29
USP15-206ENST00000546718 LIX1Q8N485 282 aa13.27□□□□□ -0.29
USP15-206ENST00000546718 SPATA6LQ8N4H0 392 aa13.27□□□□□ -0.29
USP15-206ENST00000546718 SLC15A4Q8N697 577 aa13.27□□□□□ -0.29
USP15-206ENST00000546718 LINC01560Q8TB33 94 aa13.27□□□□□ -0.29
USP15-206ENST00000546718 DOK4Q8TEW6 326 aa13.27□□□□□ -0.29
USP15-206ENST00000546718 DGAT2Q96PD7 388 aa13.27□□□□□ -0.29
USP15-206ENST00000546718 GAL3ST4Q96RP7 486 aa13.27□□□□□ -0.29
USP15-206ENST00000546718 NAP1L3Q99457 506 aaPredicted RBP13.27□□□□□ -0.29
USP15-206ENST00000546718 TIMP4Q99727 224 aa13.27□□□□□ -0.29
USP15-206ENST00000546718 TBCDQ9BTW9 1192 aa13.27□□□□□ -0.29
USP15-206ENST00000546718 DOHHQ9BU89 302 aa13.27□□□□□ -0.29
USP15-206ENST00000546718 EFCAB11Q9BUY7 163 aa13.27□□□□□ -0.29
USP15-206ENST00000546718 CAPS2Q9BXY5 557 aa13.27□□□□□ -0.29
USP15-206ENST00000546718 PRDM14Q9GZV8 571 aa13.27□□□□□ -0.29
USP15-206ENST00000546718 WWOXQ9NZC7 414 aa13.27□□□□□ -0.29
USP15-206ENST00000546718 CNIH4Q9P003 139 aa13.27□□□□□ -0.29
USP15-206ENST00000546718 FOXD3Q9UJU5 478 aaPredicted RBP13.27□□□□□ -0.29
USP15-206ENST00000546718 TEX264Q9Y6I9 313 aa13.27□□□□□ -0.29
USP15-206ENST00000546718 FREM3P0C091 2139 aa13.27□□□□□ -0.29
USP15-206ENST00000546718 CLCA1A8K7I4 914 aa13.26□□□□□ -0.29
USP15-206ENST00000546718 AHRRA9YTQ3 701 aa13.26□□□□□ -0.29
USP15-206ENST00000546718 SH3BGRLO75368 114 aa13.26□□□□□ -0.29
USP15-206ENST00000546718 PRKRAO75569 313 aaKnown RBP13.26□□□□□ -0.29
USP15-206ENST00000546718 C1QAP02745 245 aa13.26□□□□□ -0.29
USP15-206ENST00000546718 CLPSP04118 112 aa13.26□□□□□ -0.29
USP15-206ENST00000546718 CD53P19397 219 aa13.26□□□□□ -0.29
USP15-206ENST00000546718 CPN2P22792 545 aa13.26□□□□□ -0.29
USP15-206ENST00000546718 ADSLP30566 484 aaPredicted RBP13.26□□□□□ -0.29
USP15-206ENST00000546718 MSH2P43246 934 aa13.26□□□□□ -0.29
USP15-206ENST00000546718 DCAF7P61962 342 aa13.26□□□□□ -0.29
USP15-206ENST00000546718 SORDQ00796 357 aa13.26□□□□□ -0.29
USP15-206ENST00000546718 TBL3Q12788 808 aaKnown RBP13.26□□□□□ -0.29
USP15-206ENST00000546718 E2F2Q14209 437 aa13.26□□□□□ -0.29
USP15-206ENST00000546718 FRG1Q14331 258 aaKnown RBP13.26□□□□□ -0.29
USP15-206ENST00000546718 PDK4Q16654 411 aa13.26□□□□□ -0.29
USP15-206ENST00000546718 DCST1Q5T197 706 aa13.26□□□□□ -0.29
USP15-206ENST00000546718 FNDC7Q5VTL7 733 aa13.26□□□□□ -0.29
USP15-206ENST00000546718 FBXW10Q5XX13 1052 aa13.26□□□□□ -0.29
USP15-206ENST00000546718 NSUN5P2Q63ZY6 315 aa13.26□□□□□ -0.29
USP15-206ENST00000546718 TMEM198Q66K66 360 aa13.26□□□□□ -0.29
USP15-206ENST00000546718 BICRALQ6AI39 1079 aa13.26□□□□□ -0.29
USP15-206ENST00000546718 CHSY3Q70JA7 882 aa13.26□□□□□ -0.29
USP15-206ENST00000546718 SNX31Q8N9S9 440 aa13.26□□□□□ -0.29
USP15-206ENST00000546718 BBOF1Q8ND07 529 aa13.26□□□□□ -0.29
USP15-206ENST00000546718 ZNF473Q8WTR7 871 aaKnown RBP13.26□□□□□ -0.29
USP15-206ENST00000546718 LRRC46Q96FV0 321 aa13.26□□□□□ -0.29
USP15-206ENST00000546718 ZNF597Q96LX8 424 aa13.26□□□□□ -0.29
USP15-206ENST00000546718 SORBS1Q9BX66 1292 aaKnown RBP13.26□□□□□ -0.29
USP15-206ENST00000546718 ROGDIQ9GZN7 287 aa13.26□□□□□ -0.29
USP15-206ENST00000546718 DERL2Q9GZP9 239 aa13.26□□□□□ -0.29
USP15-206ENST00000546718 WWTR1Q9GZV5 400 aa13.26□□□□□ -0.29
USP15-206ENST00000546718 DDX47Q9H0S4 455 aaKnown RBP13.26□□□□□ -0.29
USP15-206ENST00000546718 UBQLN3Q9H347 655 aa13.26□□□□□ -0.29
USP15-206ENST00000546718 JKAMPQ9P055 326 aa13.26□□□□□ -0.29
USP15-206ENST00000546718 JRKLQ9Y4A0 524 aa13.26□□□□□ -0.29
USP15-206ENST00000546718 NINQ8N4C6 2090 aa13.25□□□□□ -0.29
USP15-206ENST00000546718 GOLGA6L6A8MZA4 724 aa13.25□□□□□ -0.29
USP15-206ENST00000546718 SAP18O00422 153 aaKnown RBP13.25□□□□□ -0.29
USP15-206ENST00000546718 CLGNO14967 610 aa13.25□□□□□ -0.29
USP15-206ENST00000546718 PIAS1O75925 651 aa13.25□□□□□ -0.29
USP15-206ENST00000546718 IL2RAP01589 272 aa13.25□□□□□ -0.29
USP15-206ENST00000546718 HRGP04196 525 aa13.25□□□□□ -0.29
USP15-206ENST00000546718 HEXAP06865 529 aa13.25□□□□□ -0.29
USP15-206ENST00000546718 SSR2P43308 183 aa13.25□□□□□ -0.29
USP15-206ENST00000546718 AGFG1P52594 562 aaKnown RBP13.25□□□□□ -0.29
USP15-206ENST00000546718 SLC37A1P57057 533 aa13.25□□□□□ -0.29
USP15-206ENST00000546718 PLIN5Q00G26 463 aa13.25□□□□□ -0.29
USP15-206ENST00000546718 MGAT5Q09328 741 aa13.25□□□□□ -0.29
USP15-206ENST00000546718 EBPQ15125 230 aaKnown RBP13.25□□□□□ -0.29
USP15-206ENST00000546718 PCBP2Q15366 365 aaKnown RBP eCLIP13.25□□□□□ -0.29
USP15-206ENST00000546718 OR4D1Q15615 310 aa13.25□□□□□ -0.29
USP15-206ENST00000546718 NTRK2Q16620 822 aa13.25□□□□□ -0.29
USP15-206ENST00000546718 CLEC9AQ6UXN8 241 aa13.25□□□□□ -0.29
USP15-206ENST00000546718 TMEM64Q6YI46 380 aa13.25□□□□□ -0.29
USP15-206ENST00000546718 PRIMA1Q86XR5 153 aa13.25□□□□□ -0.29
USP15-206ENST00000546718 DND1Q8IYX4 353 aaKnown RBP13.25□□□□□ -0.29
USP15-206ENST00000546718 PDIK1LQ8N165 341 aa13.25□□□□□ -0.29
USP15-206ENST00000546718 TCAIMQ8N3R3 496 aa13.25□□□□□ -0.29
USP15-206ENST00000546718 SRFBP1Q8NEF9 429 aaKnown RBP13.25□□□□□ -0.29
USP15-206ENST00000546718 ACTRT1Q8TDG2 376 aa13.25□□□□□ -0.29
USP15-206ENST00000546718 HSPBAP1Q96EW2 488 aa13.25□□□□□ -0.29
USP15-206ENST00000546718 VPS39Q96JC1 886 aa13.25□□□□□ -0.29
USP15-206ENST00000546718 CNOT10Q9H9A5 744 aaKnown RBP13.25□□□□□ -0.29
USP15-206ENST00000546718 CAB39LQ9H9S4 337 aa13.25□□□□□ -0.29
USP15-206ENST00000546718 POPDC3Q9HBV1 291 aa13.25□□□□□ -0.29
USP15-206ENST00000546718 PPP2R2CQ9Y2T4 447 aa13.25□□□□□ -0.29
USP15-206ENST00000546718 SLC6A5Q9Y345 797 aa13.25□□□□□ -0.29
USP15-206ENST00000546718 SPACA6W5XKT8 324 aa13.25□□□□□ -0.29
USP15-206ENST00000546718 COL6A5A8TX70 2615 aa13.25□□□□□ -0.29
USP15-206ENST00000546718 DOCK7Q96N67 2140 aa13.24□□□□□ -0.29
USP15-206ENST00000546718 GOLGA6L10A0A0M3HER8 536 aa13.24□□□□□ -0.29
USP15-206ENST00000546718 ANKRD33BA6NCL7 494 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms