RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 HSPA14Q0VDF9 509 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 PPP1R8Q12972 351 aaKnown RBP6.16□□□□□ -1.42
SNHG1-225ENST00000545920 SLC13A2Q13183 592 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 RIN1Q13671 783 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 CDK10Q15131 360 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 PTGES3Q15185 160 aaKnown RBP6.16□□□□□ -1.42
SNHG1-225ENST00000545920 SPHARQ15513 63 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 TAB1Q15750 504 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 TSTQ16762 297 aaKnown RBP6.16□□□□□ -1.42
SNHG1-225ENST00000545920 LRRC26Q2I0M4 334 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 EXOC3L2Q2M3D2 409 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 ZNF284Q2VY69 593 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 BCL7AQ4VC05 210 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 ATP13A5Q4VNC0 1218 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 SYTL3Q4VX76 610 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 PRSS36Q5K4E3 855 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 DDI2Q5TDH0 399 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 MFSD4BQ5TF39 518 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 HACD4Q5VWC8 232 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 C12orf73Q69YU5 71 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 FAM71E1Q6IPT2 247 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 ZNF770Q6IQ21 691 aaPredicted RBP6.16□□□□□ -1.42
SNHG1-225ENST00000545920 MZT2BQ6NZ67 158 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 C22orf39Q6P5X5 142 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 CASP12Q6UXS9 341 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 RSPO2Q6UXX9 243 aaPredicted RBP6.16□□□□□ -1.42
SNHG1-225ENST00000545920 LINGO4Q6UY18 593 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 CCDC149Q6ZUS6 474 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 TSEN54Q7Z6J9 526 aaKnown RBP6.16□□□□□ -1.42
SNHG1-225ENST00000545920 ZBTB46Q86UZ6 589 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 PLCZ1Q86YW0 608 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 KRTAP1-3Q8IUG1 177 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 BBS7Q8IWZ6 715 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 SLC22A15Q8IZD6 547 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 ADGRG2Q8IZP9 1017 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 TCTE3Q8IZS6 198 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 RDH10Q8IZV5 341 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 CYP4Z2PQ8N1L4 340 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 OR7G3Q8NG95 312 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 UTP15Q8TED0 518 aaKnown RBP6.16□□□□□ -1.42
SNHG1-225ENST00000545920 SKA2Q8WVK7 121 aaPredicted RBP6.16□□□□□ -1.42
SNHG1-225ENST00000545920 OR5P2Q8WZ92 322 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 ELMO1Q92556 727 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 SLC25A46Q96AG3 418 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 PPCDCQ96CD2 204 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 MTFMTQ96DP5 389 aaKnown RBP6.16□□□□□ -1.42
SNHG1-225ENST00000545920 NEURL3Q96EH8 262 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 CHFRQ96EP1 664 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 KLHDC7BQ96G42 594 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 ZNF514Q96K75 400 aaPredicted RBP6.16□□□□□ -1.42
SNHG1-225ENST00000545920 EGLN2Q96KS0 407 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 OR2A14Q96R47 310 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 ZNF607Q96SK3 696 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 P2RY13Q9BPV8 354 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 CHCHD6Q9BRQ6 235 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 SLC35A5Q9BS91 424 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 ASPNQ9BXN1 380 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 TEX12Q9BXU0 123 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 POLDIP3Q9BY77 421 aaKnown RBP6.16□□□□□ -1.42
SNHG1-225ENST00000545920 NLNQ9BYT8 704 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 MCOLN1Q9GZU1 580 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 OR51E2Q9H255 320 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 TP63Q9H3D4 680 aaPredicted RBP6.16□□□□□ -1.42
SNHG1-225ENST00000545920 FAM83DQ9H4H8 585 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 RC3H2Q9HBD1 1191 aaKnown RBP6.16□□□□□ -1.42
SNHG1-225ENST00000545920 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.16□□□□□ -1.42
SNHG1-225ENST00000545920 SACM1LQ9NTJ5 587 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 FBXL12Q9NXK8 326 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 GPR83Q9NYM4 423 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 PTTG3PQ9NZH4 202 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 STOX2Q9P2F5 926 aaPredicted RBP6.16□□□□□ -1.42
SNHG1-225ENST00000545920 DKK3Q9UBP4 350 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 SLC25A13Q9UJS0 675 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 ADAM29Q9UKF5 820 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 ACAD8Q9UKU7 415 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 PNMA8BQ9ULN7 279 aaPredicted RBP6.16□□□□□ -1.42
SNHG1-225ENST00000545920 DIMT1Q9UNQ2 313 aaKnown RBP6.16□□□□□ -1.42
SNHG1-225ENST00000545920 GSTK1Q9Y2Q3 226 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 TMEM98Q9Y2Y6 226 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 LSM2Q9Y333 95 aaKnown RBP6.16□□□□□ -1.42
SNHG1-225ENST00000545920 CMAHPQ9Y471 501 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 YIPF1Q9Y548 306 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 THSD7BQ9C0I4 1608 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 COL4A6Q14031 1691 aa6.16□□□□□ -1.42
SNHG1-225ENST00000545920 FRMPD3Q5JV73 1810 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 CCDC163A0A0D9SF12 145 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 C17orf113A0A1B0GUU1 675 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 GNG14A0A1W2PPG7 69 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 A0A1W2PRQ8 180 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 TMEM129A0AVI4 362 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 SLC5A10A0PJK1 596 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 CCDC182A6NF36 153 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 NPIPB15A6NHN6 443 aaPredicted RBP6.15□□□□□ -1.42
SNHG1-225ENST00000545920 NT5C1B-RDH14C9J2C7 533 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 C5orf58C9J3I9 102 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 ARHGEF9O43307 516 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 PI15O43692 258 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 SUSD5O60279 629 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 PRAMEF4O60810 478 aa6.15□□□□□ -1.42
SNHG1-225ENST00000545920 NBNO60934 754 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms