RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 SENP5Q96HI0 755 aaPredicted RBP19.54■□□□□ 0.72
SCARB1-210ENST00000545493 FBXL20Q96IG2 436 aa19.54■□□□□ 0.72
SCARB1-210ENST00000545493 DDX31Q9H8H2 851 aaKnown RBP19.54■□□□□ 0.72
SCARB1-210ENST00000545493 ZDHHC11Q9H8X9 412 aa19.54■□□□□ 0.72
SCARB1-210ENST00000545493 CHST11Q9NPF2 352 aa19.54■□□□□ 0.72
SCARB1-210ENST00000545493 PPT2Q9UMR5 302 aa19.54■□□□□ 0.72
SCARB1-210ENST00000545493 HRH3Q9Y5N1 445 aa19.54■□□□□ 0.72
SCARB1-210ENST00000545493 LIPGQ9Y5X9 500 aa19.54■□□□□ 0.72
SCARB1-210ENST00000545493 OTOGQ6ZRI0 2925 aa19.54■□□□□ 0.72
SCARB1-210ENST00000545493 A0A1W2PR48 441 aa19.53■□□□□ 0.72
SCARB1-210ENST00000545493 WASHC1A8K0Z3 465 aa19.53■□□□□ 0.72
SCARB1-210ENST00000545493 STX16-NPEPL1H3BU86 382 aa19.53■□□□□ 0.72
SCARB1-210ENST00000545493 STX16O14662 325 aa19.53■□□□□ 0.72
SCARB1-210ENST00000545493 CLDN9O95484 217 aa19.53■□□□□ 0.72
SCARB1-210ENST00000545493 CLPSP04118 112 aa19.53■□□□□ 0.72
SCARB1-210ENST00000545493 SNRPB2P08579 225 aaKnown RBP19.53■□□□□ 0.72
SCARB1-210ENST00000545493 RPS17P08708 135 aaKnown RBP19.53■□□□□ 0.72
SCARB1-210ENST00000545493 CCL3P10147 92 aa19.53■□□□□ 0.72
SCARB1-210ENST00000545493 SERPINB9P50453 376 aa19.53■□□□□ 0.72
SCARB1-210ENST00000545493 ASPHQ12797 758 aa19.53■□□□□ 0.72
SCARB1-210ENST00000545493 MPEG1Q2M385 716 aa19.53■□□□□ 0.72
SCARB1-210ENST00000545493 LYPD8Q6UX82 237 aa19.53■□□□□ 0.72
SCARB1-210ENST00000545493 SRRM1Q8IYB3 904 aaKnown RBP19.53■□□□□ 0.72
SCARB1-210ENST00000545493 OR5L2Q8NGL0 311 aa19.53■□□□□ 0.72
SCARB1-210ENST00000545493 UCN3Q969E3 161 aa19.53■□□□□ 0.72
SCARB1-210ENST00000545493 SH2D2AQ9NP31 389 aa19.53■□□□□ 0.72
SCARB1-210ENST00000545493 PSD3Q9NYI0 1048 aa19.53■□□□□ 0.72
SCARB1-210ENST00000545493 CREBBPQ92793 2442 aa19.53■□□□□ 0.72
SCARB1-210ENST00000545493 PDZD2O15018 2839 aa19.52■□□□□ 0.72
SCARB1-210ENST00000545493 ZNF407Q9C0G0 2248 aa19.52■□□□□ 0.72
SCARB1-210ENST00000545493 A0A1W2PS29 197 aa19.52■□□□□ 0.72
SCARB1-210ENST00000545493 GLOD5A6NK44 160 aa19.52■□□□□ 0.72
SCARB1-210ENST00000545493 ACOT7O00154 380 aa19.52■□□□□ 0.72
SCARB1-210ENST00000545493 FOXE1O00358 373 aaPredicted RBP19.52■□□□□ 0.72
SCARB1-210ENST00000545493 SEMA3DO95025 777 aa19.52■□□□□ 0.72
SCARB1-210ENST00000545493 GBAP04062 536 aa19.52■□□□□ 0.72
SCARB1-210ENST00000545493 RBP1P09455 135 aa19.52■□□□□ 0.72
SCARB1-210ENST00000545493 FAM58BPP0C7Q3 252 aa19.52■□□□□ 0.72
SCARB1-210ENST00000545493 TLX1P31314 330 aaPredicted RBP19.52■□□□□ 0.72
SCARB1-210ENST00000545493 PTGER4P35408 488 aa19.52■□□□□ 0.72
SCARB1-210ENST00000545493 DNASE1L1P49184 302 aa19.52■□□□□ 0.72
SCARB1-210ENST00000545493 CCNG1P51959 295 aa19.52■□□□□ 0.72
SCARB1-210ENST00000545493 HERVK_113P63132 956 aa19.52■□□□□ 0.72
SCARB1-210ENST00000545493 ERVK-8P63133 956 aa19.52■□□□□ 0.72
SCARB1-210ENST00000545493 PLGLB1Q02325 96 aa19.52■□□□□ 0.72
SCARB1-210ENST00000545493 TSNAXIP1Q2TAA8 658 aa19.52■□□□□ 0.72
SCARB1-210ENST00000545493 ARHGAP11AQ6P4F7 1023 aa19.52■□□□□ 0.72
SCARB1-210ENST00000545493 ADGRD1Q6QNK2 874 aa19.52■□□□□ 0.72
SCARB1-210ENST00000545493 CYP20A1Q6UW02 462 aa19.52■□□□□ 0.72
SCARB1-210ENST00000545493 RPS27LQ71UM5 84 aaKnown RBP19.52■□□□□ 0.72
SCARB1-210ENST00000545493 TAOK1Q7L7X3 1001 aa19.52■□□□□ 0.72
SCARB1-210ENST00000545493 RPRMLQ8N4K4 120 aa19.52■□□□□ 0.72
SCARB1-210ENST00000545493 C7orf57Q8NEG2 295 aa19.52■□□□□ 0.72
SCARB1-210ENST00000545493 UHMK1Q8TAS1 419 aaKnown RBP19.52■□□□□ 0.72
SCARB1-210ENST00000545493 MTFMTQ96DP5 389 aaKnown RBP19.52■□□□□ 0.72
SCARB1-210ENST00000545493 CNPPD1Q9BV87 410 aa19.52■□□□□ 0.72
SCARB1-210ENST00000545493 ERVK-6Q9BXR3 956 aa19.52■□□□□ 0.72
SCARB1-210ENST00000545493 TRIM8Q9BZR9 551 aa19.52■□□□□ 0.72
SCARB1-210ENST00000545493 DEFB127Q9H1M4 99 aa19.52■□□□□ 0.72
SCARB1-210ENST00000545493 TEX10Q9NXF1 929 aaPredicted RBP19.52■□□□□ 0.72
SCARB1-210ENST00000545493 ZNF180Q9UJW8 692 aa19.52■□□□□ 0.72
SCARB1-210ENST00000545493 ERVK-19Q9WJR5 959 aa19.52■□□□□ 0.72
SCARB1-210ENST00000545493 PKDREJQ9NTG1 2253 aa19.51■□□□□ 0.71
SCARB1-210ENST00000545493 A0A1B0GTL3 188 aa19.51■□□□□ 0.71
SCARB1-210ENST00000545493 TRIM49D1C9J1S8 452 aa19.51■□□□□ 0.71
SCARB1-210ENST00000545493 POC1B-GALNT4F8VUJ3 575 aa19.51■□□□□ 0.71
SCARB1-210ENST00000545493 PDE9AO76083 593 aa19.51■□□□□ 0.71
SCARB1-210ENST00000545493 SBK3P0C264 359 aa19.51■□□□□ 0.71
SCARB1-210ENST00000545493 CTAGE8P0CG41 777 aa19.51■□□□□ 0.71
SCARB1-210ENST00000545493 ARL1P40616 181 aaPredicted RBP19.51■□□□□ 0.71
SCARB1-210ENST00000545493 PPIAP62937 165 aaKnown RBP19.51■□□□□ 0.71
SCARB1-210ENST00000545493 FOXO1Q12778 655 aa19.51■□□□□ 0.71
SCARB1-210ENST00000545493 EBPQ15125 230 aaKnown RBP19.51■□□□□ 0.71
SCARB1-210ENST00000545493 GGTA1PQ4G0N0 100 aa19.51■□□□□ 0.71
SCARB1-210ENST00000545493 PIGGQ5H8A4 983 aa19.51■□□□□ 0.71
SCARB1-210ENST00000545493 EMC4Q5J8M3 183 aa19.51■□□□□ 0.71
SCARB1-210ENST00000545493 OPN5Q6U736 354 aa19.51■□□□□ 0.71
SCARB1-210ENST00000545493 GK5Q6ZS86 529 aa19.51■□□□□ 0.71
SCARB1-210ENST00000545493 CTAGE4Q8IX94 777 aa19.51■□□□□ 0.71
SCARB1-210ENST00000545493 EID3Q8N140 333 aa19.51■□□□□ 0.71
SCARB1-210ENST00000545493 TMEM251Q8N6I4 163 aa19.51■□□□□ 0.71
SCARB1-210ENST00000545493 ART5Q96L15 291 aa19.51■□□□□ 0.71
SCARB1-210ENST00000545493 SGCZQ96LD1 299 aa19.51■□□□□ 0.71
SCARB1-210ENST00000545493 FAM173AQ9BQD7 235 aa19.51■□□□□ 0.71
SCARB1-210ENST00000545493 NTMT1Q9BV86 223 aa19.51■□□□□ 0.71
SCARB1-210ENST00000545493 TSPYL1Q9H0U9 437 aa19.51■□□□□ 0.71
SCARB1-210ENST00000545493 SACM1LQ9NTJ5 587 aa19.51■□□□□ 0.71
SCARB1-210ENST00000545493 TMCO1Q9UM00 188 aa19.51■□□□□ 0.71
SCARB1-210ENST00000545493 DYRK3O43781 588 aa19.5■□□□□ 0.71
SCARB1-210ENST00000545493 SMIM24O75264 130 aa19.5■□□□□ 0.71
SCARB1-210ENST00000545493 KRT38O76015 456 aa19.5■□□□□ 0.71
SCARB1-210ENST00000545493 GPR75O95800 540 aa19.5■□□□□ 0.71
SCARB1-210ENST00000545493 COX6B1P14854 86 aa19.5■□□□□ 0.71
SCARB1-210ENST00000545493 GCAP28676 217 aa19.5■□□□□ 0.71
SCARB1-210ENST00000545493 MAGEA5P43359 124 aa19.5■□□□□ 0.71
SCARB1-210ENST00000545493 BIKQ13323 160 aa19.5■□□□□ 0.71
SCARB1-210ENST00000545493 ZNF791Q3KP31 576 aaPredicted RBP19.5■□□□□ 0.71
SCARB1-210ENST00000545493 NDUFAF5Q5TEU4 345 aa19.5■□□□□ 0.71
SCARB1-210ENST00000545493 FRG2Q64ET8 278 aa19.5■□□□□ 0.71
SCARB1-210ENST00000545493 OR52E8Q6IFG1 317 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms