RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 ZNF33BQ06732 778 aa11.68□□□□□ -0.54
ACTN1-206ENST00000544964 TBL3Q12788 808 aaKnown RBP11.68□□□□□ -0.54
ACTN1-206ENST00000544964 RUNX2Q13950 521 aa11.68□□□□□ -0.54
ACTN1-206ENST00000544964 PDCD2Q16342 344 aaPredicted RBP11.68□□□□□ -0.54
ACTN1-206ENST00000544964 SPDYAQ5MJ70 313 aa11.68□□□□□ -0.54
ACTN1-206ENST00000544964 FAM47EQ6ZV65 393 aa11.68□□□□□ -0.54
ACTN1-206ENST00000544964 LANCL3Q6ZV70 420 aa11.68□□□□□ -0.54
ACTN1-206ENST00000544964 TRIM46Q7Z4K8 759 aa11.68□□□□□ -0.54
ACTN1-206ENST00000544964 FJX1Q86VR8 437 aa11.68□□□□□ -0.54
ACTN1-206ENST00000544964 CA13Q8N1Q1 262 aa11.68□□□□□ -0.54
ACTN1-206ENST00000544964 C1orf52Q8N6N3 182 aaKnown RBP11.68□□□□□ -0.54
ACTN1-206ENST00000544964 GBP7Q8N8V2 638 aaPredicted RBP11.68□□□□□ -0.54
ACTN1-206ENST00000544964 ACOT4Q8N9L9 421 aa11.68□□□□□ -0.54
ACTN1-206ENST00000544964 OR2T11Q8NH01 316 aa11.68□□□□□ -0.54
ACTN1-206ENST00000544964 APIPQ96GX9 242 aa11.68□□□□□ -0.54
ACTN1-206ENST00000544964 IMMP1LQ96LU5 166 aa11.68□□□□□ -0.54
ACTN1-206ENST00000544964 KCNC2Q96PR1 638 aa11.68□□□□□ -0.54
ACTN1-206ENST00000544964 ZNF717Q9BY31 904 aaPredicted RBP11.68□□□□□ -0.54
ACTN1-206ENST00000544964 VN1R1Q9GZP7 353 aa11.68□□□□□ -0.54
ACTN1-206ENST00000544964 GIMAP2Q9UG22 337 aa11.68□□□□□ -0.54
ACTN1-206ENST00000544964 MKL2Q9ULH7 1088 aa11.68□□□□□ -0.54
ACTN1-206ENST00000544964 TACC2O95359 2948 aa11.68□□□□□ -0.54
ACTN1-206ENST00000544964 F8P00451 2351 aa11.68□□□□□ -0.54
ACTN1-206ENST00000544964 A0A088AWK7 358 aa11.67□□□□□ -0.54
ACTN1-206ENST00000544964 ATP6AP2A0A1C7CYW4 349 aa11.67□□□□□ -0.54
ACTN1-206ENST00000544964 B3GALT2O43825 422 aa11.67□□□□□ -0.54
ACTN1-206ENST00000544964 ATP6AP2O75787 350 aa11.67□□□□□ -0.54
ACTN1-206ENST00000544964 SEMA3DO95025 777 aa11.67□□□□□ -0.54
ACTN1-206ENST00000544964 KLK1P06870 262 aa11.67□□□□□ -0.54
ACTN1-206ENST00000544964 ZNF10P21506 573 aaPredicted RBP11.67□□□□□ -0.54
ACTN1-206ENST00000544964 HIST1H1TP22492 207 aaPredicted RBP11.67□□□□□ -0.54
ACTN1-206ENST00000544964 MST1P26927 711 aa11.67□□□□□ -0.54
ACTN1-206ENST00000544964 GYS2P54840 703 aa11.67□□□□□ -0.54
ACTN1-206ENST00000544964 SKP1P63208 163 aa11.67□□□□□ -0.54
ACTN1-206ENST00000544964 SRSF11Q05519 484 aaKnown RBP11.67□□□□□ -0.54
ACTN1-206ENST00000544964 NIPAL1Q6NVV3 410 aa11.67□□□□□ -0.54
ACTN1-206ENST00000544964 Q6ZSR9 355 aa11.67□□□□□ -0.54
ACTN1-206ENST00000544964 COMMD6Q7Z4G1 85 aa11.67□□□□□ -0.54
ACTN1-206ENST00000544964 NUDT13Q86X67 352 aa11.67□□□□□ -0.54
ACTN1-206ENST00000544964 CRLF3Q8IUI8 442 aa11.67□□□□□ -0.54
ACTN1-206ENST00000544964 METTL4Q8N3J2 472 aa11.67□□□□□ -0.54
ACTN1-206ENST00000544964 OR51Q1Q8NH59 317 aa11.67□□□□□ -0.54
ACTN1-206ENST00000544964 CHTF18Q8WVB6 975 aa11.67□□□□□ -0.54
ACTN1-206ENST00000544964 RELTQ969Z4 430 aa11.67□□□□□ -0.54
ACTN1-206ENST00000544964 PEX11GQ96HA9 241 aa11.67□□□□□ -0.54
ACTN1-206ENST00000544964 C3orf30Q96M34 536 aa11.67□□□□□ -0.54
ACTN1-206ENST00000544964 C7orf26Q96N11 449 aa11.67□□□□□ -0.54
ACTN1-206ENST00000544964 SERINC2Q96SA4 455 aa11.67□□□□□ -0.54
ACTN1-206ENST00000544964 MAPKAP1Q9BPZ7 522 aa11.67□□□□□ -0.54
ACTN1-206ENST00000544964 RBCK1Q9BYM8 510 aa11.67□□□□□ -0.54
ACTN1-206ENST00000544964 ROGDIQ9GZN7 287 aa11.67□□□□□ -0.54
ACTN1-206ENST00000544964 NMRK1Q9NWW6 199 aa11.67□□□□□ -0.54
ACTN1-206ENST00000544964 AHSPQ9NZD4 102 aa11.67□□□□□ -0.54
ACTN1-206ENST00000544964 FBXW2Q9UKT8 454 aa11.67□□□□□ -0.54
ACTN1-206ENST00000544964 ENTPD4Q9Y227 616 aa11.67□□□□□ -0.54
ACTN1-206ENST00000544964 CCL27Q9Y4X3 112 aa11.67□□□□□ -0.54
ACTN1-206ENST00000544964 ANKRD17O75179 2603 aaKnown RBP11.67□□□□□ -0.54
ACTN1-206ENST00000544964 CELSR1Q9NYQ6 3014 aa11.67□□□□□ -0.54
ACTN1-206ENST00000544964 IGHV3-20A0A0C4DH32 117 aa11.66□□□□□ -0.54
ACTN1-206ENST00000544964 A0A1B0GUH1 482 aa11.66□□□□□ -0.54
ACTN1-206ENST00000544964 FAM227AF5H4B4 570 aa11.66□□□□□ -0.54
ACTN1-206ENST00000544964 RGS14O43566 566 aa11.66□□□□□ -0.54
ACTN1-206ENST00000544964 TMPRSS11DO60235 418 aa11.66□□□□□ -0.54
ACTN1-206ENST00000544964 PEX11AO75192 247 aa11.66□□□□□ -0.54
ACTN1-206ENST00000544964 SEC22BO75396 215 aa11.66□□□□□ -0.54
ACTN1-206ENST00000544964 RSL1D1O76021 490 aaKnown RBP11.66□□□□□ -0.54
ACTN1-206ENST00000544964 SEC24DO94855 1032 aaPredicted RBP11.66□□□□□ -0.54
ACTN1-206ENST00000544964 SCELO95171 688 aa11.66□□□□□ -0.54
ACTN1-206ENST00000544964 C8orf89P0DMQ9 161 aa11.66□□□□□ -0.54
ACTN1-206ENST00000544964 TPP2P29144 1249 aaPredicted RBP11.66□□□□□ -0.54
ACTN1-206ENST00000544964 MDH1P40925 334 aaKnown RBP11.66□□□□□ -0.54
ACTN1-206ENST00000544964 XCR1P46094 333 aa11.66□□□□□ -0.54
ACTN1-206ENST00000544964 ARFIP1P53367 373 aa11.66□□□□□ -0.54
ACTN1-206ENST00000544964 SLAMF1Q13291 335 aa11.66□□□□□ -0.54
ACTN1-206ENST00000544964 GALNTL6Q49A17 601 aa11.66□□□□□ -0.54
ACTN1-206ENST00000544964 XKR7Q5GH72 579 aa11.66□□□□□ -0.54
ACTN1-206ENST00000544964 RGS9BPQ6ZS82 235 aa11.66□□□□□ -0.54
ACTN1-206ENST00000544964 RNF165Q6ZSG1 346 aa11.66□□□□□ -0.54
ACTN1-206ENST00000544964 WDR75Q8IWA0 830 aaKnown RBP11.66□□□□□ -0.54
ACTN1-206ENST00000544964 SLC34A3Q8N130 599 aa11.66□□□□□ -0.54
ACTN1-206ENST00000544964 ITLN2Q8WWU7 325 aaPredicted RBP11.66□□□□□ -0.54
ACTN1-206ENST00000544964 TUBB6Q9BUF5 446 aa11.66□□□□□ -0.54
ACTN1-206ENST00000544964 EBPLQ9BY08 206 aa11.66□□□□□ -0.54
ACTN1-206ENST00000544964 NUF2Q9BZD4 464 aa11.66□□□□□ -0.54
ACTN1-206ENST00000544964 DDX31Q9H8H2 851 aaKnown RBP11.66□□□□□ -0.54
ACTN1-206ENST00000544964 LRTM1Q9HBL6 345 aa11.66□□□□□ -0.54
ACTN1-206ENST00000544964 ABI3Q9P2A4 366 aa11.66□□□□□ -0.54
ACTN1-206ENST00000544964 A0A0A6YYD5 115 aa11.65□□□□□ -0.54
ACTN1-206ENST00000544964 ARHGAP10A1A4S6 786 aa11.65□□□□□ -0.54
ACTN1-206ENST00000544964 OR5H15A6NDH6 313 aa11.65□□□□□ -0.54
ACTN1-206ENST00000544964 OR2W5A6NFC9 320 aa11.65□□□□□ -0.54
ACTN1-206ENST00000544964 ENO4A6NNW6 628 aa11.65□□□□□ -0.54
ACTN1-206ENST00000544964 HNRNPRO43390 633 aaKnown RBP11.65□□□□□ -0.54
ACTN1-206ENST00000544964 WISP2O76076 250 aa11.65□□□□□ -0.54
ACTN1-206ENST00000544964 CYC1P08574 325 aa11.65□□□□□ -0.54
ACTN1-206ENST00000544964 RNH1P13489 461 aaKnown RBP11.65□□□□□ -0.54
ACTN1-206ENST00000544964 LIM2P55344 173 aa11.65□□□□□ -0.54
ACTN1-206ENST00000544964 HNRNPH2P55795 449 aaKnown RBP11.65□□□□□ -0.54
ACTN1-206ENST00000544964 RAB38P57729 211 aa11.65□□□□□ -0.54
ACTN1-206ENST00000544964 RPL38P63173 70 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms