RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 MCM8Q9UJA3 840 aa6.21□□□□□ -1.42
CDCA3-209ENST00000544610 PLAGL1Q9UM63 463 aa6.21□□□□□ -1.42
CDCA3-209ENST00000544610 SLC12A4Q9UP95 1085 aa6.21□□□□□ -1.42
CDCA3-209ENST00000544610 SLC5A6Q9Y289 635 aa6.21□□□□□ -1.42
CDCA3-209ENST00000544610 B3GNT3Q9Y2A9 372 aa6.21□□□□□ -1.42
CDCA3-209ENST00000544610 PADI2Q9Y2J8 665 aa6.21□□□□□ -1.42
CDCA3-209ENST00000544610 AP3M1Q9Y2T2 418 aa6.21□□□□□ -1.42
CDCA3-209ENST00000544610 COPG1Q9Y678 874 aaKnown RBP6.21□□□□□ -1.42
CDCA3-209ENST00000544610 GMEB1Q9Y692 573 aa6.21□□□□□ -1.42
CDCA3-209ENST00000544610 CSMD2Q7Z408 3487 aa6.21□□□□□ -1.42
CDCA3-209ENST00000544610 SEC16AO15027 2179 aa6.21□□□□□ -1.42
CDCA3-209ENST00000544610 MDC1Q14676 2089 aaKnown RBP6.21□□□□□ -1.42
CDCA3-209ENST00000544610 SHANK1Q9Y566 2161 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 MYO9AB2RTY4 2548 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 NBASA2RRP1 2371 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 FAM234BA2RU67 622 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 GSAPA4D1B5 854 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 C9J4A7 227 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 E9PBE3 544 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 H3BMH7 237 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 FFAR3O14843 346 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 ANKRD28O15084 1053 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 GPR42O15529 346 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 ZNF749O43361 778 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 OR1F1O43749 312 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 KLHL41O60662 606 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 PEX11AO75192 247 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 SEC22BO75396 215 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 SLC22A3O75751 556 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 ALPPP05187 535 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 KRT16P08779 473 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 HBQ1P09105 142 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 ALDOCP09972 364 aaKnown RBP6.2□□□□□ -1.42
CDCA3-209ENST00000544610 SMIM10L1P0DMW3 83 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 DRD2P14416 443 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 NCF2P19878 526 aaPredicted RBP6.2□□□□□ -1.42
CDCA3-209ENST00000544610 AGXTP21549 392 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 IL10P22301 178 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 GPX3P22352 226 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 TIA1P31483 386 aaKnown RBP eCLIP6.2□□□□□ -1.42
CDCA3-209ENST00000544610 OTX2P32243 289 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 HTR6P50406 440 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 ZNF763Q0D2J5 394 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 KLF10Q13118 480 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 BIKQ13323 160 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 RAPSNQ13702 412 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 CYLC2Q14093 348 aaPredicted RBP6.2□□□□□ -1.42
CDCA3-209ENST00000544610 MYBPC3Q14896 1274 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 HEPACAMQ14CZ8 416 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 PLEKHN1Q494U1 663 aaPredicted RBP6.2□□□□□ -1.42
CDCA3-209ENST00000544610 RFTN2Q52LD8 501 aaPredicted RBP6.2□□□□□ -1.42
CDCA3-209ENST00000544610 ARSJQ5FYB0 599 aaPredicted RBP6.2□□□□□ -1.42
CDCA3-209ENST00000544610 DCAF10Q5QP82 559 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 NXNQ6DKJ4 435 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 FBXO42Q6P3S6 717 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 TRIM40Q6P9F5 258 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 CYP20A1Q6UW02 462 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 ABHD13Q7L211 337 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 VN1R5Q7Z5H4 357 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 RIMKLAQ8IXN7 391 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.2□□□□□ -1.42
CDCA3-209ENST00000544610 DNAJC22Q8N4W6 341 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 DPP10Q8N608 796 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 C19orf47Q8N9M1 422 aaKnown RBP6.2□□□□□ -1.42
CDCA3-209ENST00000544610 ANKRD53Q8N9V6 530 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 PCYOX1LQ8NBM8 494 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 CLEC1AQ8NC01 280 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 OR2L5Q8NG80 312 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 OR8J2Q8NGG1 315 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 OR2T11Q8NH01 316 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 PROKR1Q8TCW9 393 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 AGR3Q8TD06 166 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 ADAMTS18Q8TE60 1221 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 SLC13A3Q8WWT9 602 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 POP5Q969H6 163 aaKnown RBP6.2□□□□□ -1.42
CDCA3-209ENST00000544610 RERGQ96A58 199 aaPredicted RBP6.2□□□□□ -1.42
CDCA3-209ENST00000544610 ROPN1LQ96C74 230 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 SMIM10Q96HG1 83 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 NSL1Q96IY1 281 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 FER1L6-AS2Q96M78 137 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 C5orf34Q96MH7 638 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 MTERF1Q99551 399 aaKnown RBP6.2□□□□□ -1.42
CDCA3-209ENST00000544610 ZBTB18Q99592 522 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 C17orf62Q9BQA9 187 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 ACAT2Q9BWD1 397 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 NPLQ9BXD5 320 aaPredicted RBP6.2□□□□□ -1.42
CDCA3-209ENST00000544610 SLC7A5P2Q9GIP4 190 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 REXO4Q9GZR2 422 aaKnown RBP6.2□□□□□ -1.42
CDCA3-209ENST00000544610 EFCAB1Q9HAE3 211 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 MYNNQ9NPC7 610 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 FARSBQ9NSD9 589 aaKnown RBP6.2□□□□□ -1.42
CDCA3-209ENST00000544610 ATAD3AQ9NVI7 634 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 SERTAD3Q9UJW9 196 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 PLCL2Q9UPR0 1127 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 SH2B3Q9UQQ2 575 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 NDUFAF1Q9Y375 327 aa6.2□□□□□ -1.42
CDCA3-209ENST00000544610 SPTAN1Q13813 2472 aaKnown RBP6.2□□□□□ -1.42
CDCA3-209ENST00000544610 LRBAP50851 2863 aa6.19□□□□□ -1.42
CDCA3-209ENST00000544610 C15orf38-AP3S2A0A0A6YYH1 394 aa6.19□□□□□ -1.42
CDCA3-209ENST00000544610 ATP6AP2A0A1C7CYW4 349 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms