RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 THAP3Q8WTV1 239 aaPredicted RBP5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 PSMF1Q92530 271 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 NCLNQ969V3 563 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 ERP27Q96DN0 273 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 GPR78Q96P69 363 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 BARD1Q99728 777 aaKnown RBP5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 CCT7Q99832 543 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 MAPKAP1Q9BPZ7 522 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 SPNS1Q9H2V7 528 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 TRIM45Q9H8W5 580 aaPredicted RBP5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 SEMA4BQ9NPR2 832 aaPredicted RBP5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 RRAGDQ9NQL2 400 aaPredicted RBP5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 PLA2G3Q9NZ20 509 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 LUZP4Q9P127 313 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 MYOTQ9UBF9 498 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 SEC14L3Q9UDX4 400 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 PRODH2Q9UF12 536 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 TBK1Q9UHD2 729 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 SLC12A4Q9UP95 1085 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 ENTPD4Q9Y227 616 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 RNF11Q9Y3C5 154 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 PCSK5Q92824 1860 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 FER1L5A0AVI2 2057 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 SCN2AQ99250 2005 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 POLEQ07864 2286 aa5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 TLDC2A0PJX2 215 aa5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 HMX2A2RU54 273 aa5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 WIPF3A6NGB9 483 aa5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 A8MT66 165 aa5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 FAM227AF5H4B4 570 aa5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 SAP18O00422 153 aaKnown RBP5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 PLPP1O14494 284 aa5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 RGS14O43566 566 aa5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 ZNF500O60304 480 aaPredicted RBP5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 NME2P1O60361 137 aa5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 LDB3O75112 727 aa5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 SOX30O94993 753 aa5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 SIX3O95343 332 aaPredicted RBP5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 KLK1P06870 262 aa5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 RPS17P08708 135 aaKnown RBP5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 NEFHP12036 1026 aa5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 CPA3P15088 417 aa5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 PORP16435 677 aaPredicted RBP5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 KRT4P19013 534 aa5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 CSNK2A2P19784 350 aaPredicted RBP5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 CD22P20273 847 aa5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 NME2P22392 152 aa5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 MAPK1P28482 360 aa5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 TPP2P29144 1249 aaPredicted RBP5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 ECHS1P30084 290 aa5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 KRT20P35900 424 aa5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 HSD17B3P37058 310 aa5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 RPL3P39023 403 aaKnown RBP5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 XKP51811 444 aa5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 FOXL2P58012 376 aa5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 DNAJB13P59910 316 aa5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 RNF4P78317 190 aa5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 PLGLB1Q02325 96 aa5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 FOLH1Q04609 750 aa5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 ERCC6LQ2NKX8 1250 aa5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 EIF2S3LQ2VIR3 472 aaKnown RBP5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 SGO1Q5FBB7 561 aa5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 SPDYAQ5MJ70 313 aa5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 ZNF678Q5SXM1 525 aa5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 C1QL3Q5VWW1 255 aa5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 LIPMQ5VYY2 423 aa5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 SPINK14Q6IE38 97 aa5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 WDR93Q6P2C0 686 aa5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 ARHGAP11AQ6P4F7 1023 aa5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 RTL4Q6ZR62 310 aa5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 ARMC10Q8N2F6 343 aa5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 METTL4Q8N3J2 472 aa5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 Q8NA96 180 aa5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 APCDD1LQ8NCL9 501 aa5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 CATSPER1Q8NEC5 780 aa5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 C17orf47Q8NEP4 570 aa5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 OR4F6Q8NGB9 312 aa5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 PPP1R14CQ8TAE6 165 aa5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 WDR20Q8TBZ3 569 aa5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 SLC2A12Q8TD20 617 aa5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 ZNF483Q8TF39 744 aaPredicted RBP5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 TP53INP1Q96A56 240 aa5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 MTFMTQ96DP5 389 aaKnown RBP5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 L3HYPDHQ96EM0 354 aa5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 LRRC46Q96FV0 321 aa5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 SCMH1Q96GD3 660 aa5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 SENP5Q96HI0 755 aaPredicted RBP5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 FBXL20Q96IG2 436 aa5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 SLX1AQ9BQ83 275 aa5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 FAM173AQ9BQD7 235 aa5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 CNPPD1Q9BV87 410 aa5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 SLC24A3Q9HC58 644 aa5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 ZBTB20Q9HC78 741 aaPredicted RBP5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 CHST11Q9NPF2 352 aa5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 NECTIN3Q9NQS3 549 aa5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 KLHL1Q9NR64 748 aa5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 SACM1LQ9NTJ5 587 aa5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 CNIH4Q9P003 139 aa5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 KCMF1Q9P0J7 381 aa5.22□□□□□ -1.57
CLSTN3-215ENST00000544584 MCM8Q9UJA3 840 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms