RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 ADAP2Q9NPF8 381 aa13.56□□□□□ -0.24
TNFRSF1A-216ENST00000543995 SH3BP4Q9P0V3 963 aa13.56□□□□□ -0.24
TNFRSF1A-216ENST00000543995 CES1P1Q9UKY3 287 aa13.56□□□□□ -0.24
TNFRSF1A-216ENST00000543995 ENTPD4Q9Y227 616 aa13.56□□□□□ -0.24
TNFRSF1A-216ENST00000543995 CLDN16Q9Y5I7 305 aa13.56□□□□□ -0.24
TNFRSF1A-216ENST00000543995 SEC24DO94855 1032 aaPredicted RBP13.55□□□□□ -0.24
TNFRSF1A-216ENST00000543995 HPP00738 406 aa13.55□□□□□ -0.24
TNFRSF1A-216ENST00000543995 IDO1P14902 403 aa13.55□□□□□ -0.24
TNFRSF1A-216ENST00000543995 PORP16435 677 aaPredicted RBP13.55□□□□□ -0.24
TNFRSF1A-216ENST00000543995 DDX5P17844 614 aaKnown RBP13.55□□□□□ -0.24
TNFRSF1A-216ENST00000543995 RPL3P39023 403 aaKnown RBP13.55□□□□□ -0.24
TNFRSF1A-216ENST00000543995 FEN1P39748 380 aaKnown RBP13.55□□□□□ -0.24
TNFRSF1A-216ENST00000543995 SEC24CP53992 1094 aa13.55□□□□□ -0.24
TNFRSF1A-216ENST00000543995 RRADP55042 308 aa13.55□□□□□ -0.24
TNFRSF1A-216ENST00000543995 NME5P56597 212 aa13.55□□□□□ -0.24
TNFRSF1A-216ENST00000543995 CLDN8P56748 225 aa13.55□□□□□ -0.24
TNFRSF1A-216ENST00000543995 IGLV3-21P80748 117 aaPredicted RBP13.55□□□□□ -0.24
TNFRSF1A-216ENST00000543995 PCOLCEQ15113 449 aa13.55□□□□□ -0.24
TNFRSF1A-216ENST00000543995 ZNF750Q32MQ0 723 aa13.55□□□□□ -0.24
TNFRSF1A-216ENST00000543995 TMEM198Q66K66 360 aa13.55□□□□□ -0.24
TNFRSF1A-216ENST00000543995 KRTCAP2Q8N6L1 136 aa13.55□□□□□ -0.24
TNFRSF1A-216ENST00000543995 TMEM102Q8N9M5 508 aaPredicted RBP13.55□□□□□ -0.24
TNFRSF1A-216ENST00000543995 PPWD1Q96BP3 646 aaKnown RBP13.55□□□□□ -0.24
TNFRSF1A-216ENST00000543995 PELOQ9BRX2 385 aaKnown RBP13.55□□□□□ -0.24
TNFRSF1A-216ENST00000543995 CCDC28BQ9BUN5 200 aa13.55□□□□□ -0.24
TNFRSF1A-216ENST00000543995 TMEM120AQ9BXJ8 343 aa13.55□□□□□ -0.24
TNFRSF1A-216ENST00000543995 DPY30Q9C005 99 aa13.55□□□□□ -0.24
TNFRSF1A-216ENST00000543995 FAM107BQ9H098 131 aa13.55□□□□□ -0.24
TNFRSF1A-216ENST00000543995 NSRP1Q9H0G5 558 aaKnown RBP13.55□□□□□ -0.24
TNFRSF1A-216ENST00000543995 KCNK13Q9HB14 408 aa13.55□□□□□ -0.24
TNFRSF1A-216ENST00000543995 ZNF160Q9HCG1 818 aa13.55□□□□□ -0.24
TNFRSF1A-216ENST00000543995 SLC35C2Q9NQQ7 365 aa13.55□□□□□ -0.24
TNFRSF1A-216ENST00000543995 AIG1Q9NVV5 245 aa13.55□□□□□ -0.24
TNFRSF1A-216ENST00000543995 EXO1Q9UQ84 846 aaKnown RBP13.55□□□□□ -0.24
TNFRSF1A-216ENST00000543995 CLCA3PQ9Y6N3 262 aa13.55□□□□□ -0.24
TNFRSF1A-216ENST00000543995 IGF2RP11717 2491 aa13.55□□□□□ -0.24
TNFRSF1A-216ENST00000543995 PCSK5Q92824 1860 aa13.55□□□□□ -0.24
TNFRSF1A-216ENST00000543995 A0A1W2PS29 197 aa13.54□□□□□ -0.24
TNFRSF1A-216ENST00000543995 GMNCA6NCL1 334 aa13.54□□□□□ -0.24
TNFRSF1A-216ENST00000543995 SCAMP2O15127 329 aaKnown RBP13.54□□□□□ -0.24
TNFRSF1A-216ENST00000543995 CPMP14384 443 aa13.54□□□□□ -0.24
TNFRSF1A-216ENST00000543995 CSNK2A2P19784 350 aaPredicted RBP13.54□□□□□ -0.24
TNFRSF1A-216ENST00000543995 PRPS1L1P21108 318 aa13.54□□□□□ -0.24
TNFRSF1A-216ENST00000543995 STT3AP46977 705 aa13.54□□□□□ -0.24
TNFRSF1A-216ENST00000543995 ARFIP2P53365 341 aa13.54□□□□□ -0.24
TNFRSF1A-216ENST00000543995 ELAVL1Q15717 326 aaKnown RBP13.54□□□□□ -0.24
TNFRSF1A-216ENST00000543995 GSTA3Q16772 222 aa13.54□□□□□ -0.24
TNFRSF1A-216ENST00000543995 DCAF10Q5QP82 559 aa13.54□□□□□ -0.24
TNFRSF1A-216ENST00000543995 C6orf163Q5TEZ5 329 aa13.54□□□□□ -0.24
TNFRSF1A-216ENST00000543995 CGB2Q6NT52 195 aa13.54□□□□□ -0.24
TNFRSF1A-216ENST00000543995 C19orf48Q6RUI8 117 aa13.54□□□□□ -0.24
TNFRSF1A-216ENST00000543995 CPLX4Q7Z7G2 160 aa13.54□□□□□ -0.24
TNFRSF1A-216ENST00000543995 SAMD14Q8IZD0 417 aaPredicted RBP13.54□□□□□ -0.24
TNFRSF1A-216ENST00000543995 ST13P4Q8IZP2 240 aaPredicted RBP13.54□□□□□ -0.24
TNFRSF1A-216ENST00000543995 LRRC25Q8N386 305 aaPredicted RBP13.54□□□□□ -0.24
TNFRSF1A-216ENST00000543995 CLEC1AQ8NC01 280 aa13.54□□□□□ -0.24
TNFRSF1A-216ENST00000543995 DAZLQ92904 295 aaKnown RBP13.54□□□□□ -0.24
TNFRSF1A-216ENST00000543995 MTERF3Q96E29 417 aa13.54□□□□□ -0.24
TNFRSF1A-216ENST00000543995 CNRIP1Q96F85 164 aaPredicted RBP13.54□□□□□ -0.24
TNFRSF1A-216ENST00000543995 BBS4Q96RK4 519 aa13.54□□□□□ -0.24
TNFRSF1A-216ENST00000543995 PRPF18Q99633 342 aaKnown RBP13.54□□□□□ -0.24
TNFRSF1A-216ENST00000543995 TUBB6Q9BUF5 446 aa13.54□□□□□ -0.24
TNFRSF1A-216ENST00000543995 KLHL14Q9P2G3 628 aa13.54□□□□□ -0.24
TNFRSF1A-216ENST00000543995 MAPRE3Q9UPY8 281 aa13.54□□□□□ -0.24
TNFRSF1A-216ENST00000543995 GABRR3A8MPY1 467 aa13.54□□□□□ -0.24
TNFRSF1A-216ENST00000543995 C17orf105B2RV13 164 aa13.54□□□□□ -0.24
TNFRSF1A-216ENST00000543995 MASP2O00187 686 aa13.54□□□□□ -0.24
TNFRSF1A-216ENST00000543995 DYRK3O43781 588 aa13.54□□□□□ -0.24
TNFRSF1A-216ENST00000543995 SLC35E2P0CK97 266 aa13.54□□□□□ -0.24
TNFRSF1A-216ENST00000543995 PCSK2P16519 638 aa13.54□□□□□ -0.24
TNFRSF1A-216ENST00000543995 NT5EP21589 574 aa13.54□□□□□ -0.24
TNFRSF1A-216ENST00000543995 NTSP30990 170 aa13.54□□□□□ -0.24
TNFRSF1A-216ENST00000543995 PGDP52209 483 aa13.54□□□□□ -0.24
TNFRSF1A-216ENST00000543995 STX1BP61266 288 aa13.54□□□□□ -0.24
TNFRSF1A-216ENST00000543995 CHAF1BQ13112 559 aa13.54□□□□□ -0.24
TNFRSF1A-216ENST00000543995 EXT1Q16394 746 aa13.54□□□□□ -0.24
TNFRSF1A-216ENST00000543995 BTBD16Q32M84 506 aa13.54□□□□□ -0.24
TNFRSF1A-216ENST00000543995 STON2Q8WXE9 905 aa13.54□□□□□ -0.24
TNFRSF1A-216ENST00000543995 RIT1Q92963 219 aa13.54□□□□□ -0.24
TNFRSF1A-216ENST00000543995 CRELD1Q96HD1 420 aa13.54□□□□□ -0.24
TNFRSF1A-216ENST00000543995 WDR77Q9BQA1 342 aaPredicted RBP13.54□□□□□ -0.24
TNFRSF1A-216ENST00000543995 ATP13A2Q9NQ11 1180 aa13.54□□□□□ -0.24
TNFRSF1A-216ENST00000543995 TRIM33Q9UPN9 1127 aa13.54□□□□□ -0.24
TNFRSF1A-216ENST00000543995 GPR45Q9Y5Y3 372 aa13.54□□□□□ -0.24
TNFRSF1A-216ENST00000543995 DMXL2Q8TDJ6 3036 aa13.54□□□□□ -0.24
TNFRSF1A-216ENST00000543995 A0A1W2PQ72 361 aa13.53□□□□□ -0.24
TNFRSF1A-216ENST00000543995 SAGE2PA6NJ88 616 aa13.53□□□□□ -0.24
TNFRSF1A-216ENST00000543995 PDPK1O15530 556 aa13.53□□□□□ -0.24
TNFRSF1A-216ENST00000543995 ICAM2P13598 275 aa13.53□□□□□ -0.24
TNFRSF1A-216ENST00000543995 NCF2P19878 526 aaPredicted RBP13.53□□□□□ -0.24
TNFRSF1A-216ENST00000543995 MPIP34949 423 aa13.53□□□□□ -0.24
TNFRSF1A-216ENST00000543995 SLC26A5P58743 744 aa13.53□□□□□ -0.24
TNFRSF1A-216ENST00000543995 UFM1P61960 85 aa13.53□□□□□ -0.24
TNFRSF1A-216ENST00000543995 PDE7AQ13946 482 aa13.53□□□□□ -0.24
TNFRSF1A-216ENST00000543995 TERF2Q15554 542 aa13.53□□□□□ -0.24
TNFRSF1A-216ENST00000543995 PRSS53Q2L4Q9 553 aa13.53□□□□□ -0.24
TNFRSF1A-216ENST00000543995 PGS1Q32NB8 556 aa13.53□□□□□ -0.24
TNFRSF1A-216ENST00000543995 PDCD4Q53EL6 469 aaKnown RBP13.53□□□□□ -0.24
TNFRSF1A-216ENST00000543995 CPTPQ5TA50 214 aa13.53□□□□□ -0.24
TNFRSF1A-216ENST00000543995 CPZQ66K79 652 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms