RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 SLC35E2P0CK97 266 aa21.67■■□□□ 1.06
HOMER3-205ENST00000542541 LAMP1P11279 417 aa21.67■■□□□ 1.06
HOMER3-205ENST00000542541 CPMP14384 443 aa21.67■■□□□ 1.06
HOMER3-205ENST00000542541 PORP16435 677 aaPredicted RBP21.67■■□□□ 1.06
HOMER3-205ENST00000542541 F8A1P23610 371 aa21.67■■□□□ 1.06
HOMER3-205ENST00000542541 NTSP30990 170 aa21.67■■□□□ 1.06
HOMER3-205ENST00000542541 KCNK10P57789 538 aa21.67■■□□□ 1.06
HOMER3-205ENST00000542541 FOXL2P58012 376 aa21.67■■□□□ 1.06
HOMER3-205ENST00000542541 ID2Q02363 134 aa21.67■■□□□ 1.06
HOMER3-205ENST00000542541 FAM174BQ3ZCQ3 159 aa21.67■■□□□ 1.06
HOMER3-205ENST00000542541 OR9I1Q8NGQ6 314 aa21.67■■□□□ 1.06
HOMER3-205ENST00000542541 CNRIP1Q96F85 164 aaPredicted RBP21.67■■□□□ 1.06
HOMER3-205ENST00000542541 VPS50Q96JG6 964 aa21.67■■□□□ 1.06
HOMER3-205ENST00000542541 TCRBV16S1A1N1A0A5B0 115 aa21.66■■□□□ 1.06
HOMER3-205ENST00000542541 DYTNA2CJ06 578 aa21.66■■□□□ 1.06
HOMER3-205ENST00000542541 PDPK1O15530 556 aa21.66■■□□□ 1.06
HOMER3-205ENST00000542541 TLX3O43711 291 aaPredicted RBP21.66■■□□□ 1.06
HOMER3-205ENST00000542541 LIFP15018 202 aa21.66■■□□□ 1.06
HOMER3-205ENST00000542541 MMP11P24347 488 aa21.66■■□□□ 1.06
HOMER3-205ENST00000542541 IL12AP29459 219 aa21.66■■□□□ 1.06
HOMER3-205ENST00000542541 RPS18P62269 152 aaKnown RBP21.66■■□□□ 1.06
HOMER3-205ENST00000542541 PLIN5Q00G26 463 aa21.66■■□□□ 1.06
HOMER3-205ENST00000542541 UBAP2LQ14157 1087 aaKnown RBP21.66■■□□□ 1.06
HOMER3-205ENST00000542541 SPANXN4Q5MJ08 99 aa21.66■■□□□ 1.06
HOMER3-205ENST00000542541 ANXA8L1Q5VT79 327 aa21.66■■□□□ 1.06
HOMER3-205ENST00000542541 FAAH2Q6GMR7 532 aa21.66■■□□□ 1.06
HOMER3-205ENST00000542541 BLOC1S3Q6QNY0 202 aa21.66■■□□□ 1.06
HOMER3-205ENST00000542541 LRRC25Q8N386 305 aaPredicted RBP21.66■■□□□ 1.06
HOMER3-205ENST00000542541 TSLPQ969D9 159 aa21.66■■□□□ 1.06
HOMER3-205ENST00000542541 ZBED6CLQ96FA7 236 aaPredicted RBP21.66■■□□□ 1.06
HOMER3-205ENST00000542541 ZNF681Q96N22 645 aa21.66■■□□□ 1.06
HOMER3-205ENST00000542541 CLDN16Q9Y5I7 305 aa21.66■■□□□ 1.06
HOMER3-205ENST00000542541 CAPN7Q9Y6W3 813 aa21.66■■□□□ 1.06
HOMER3-205ENST00000542541 FREM2Q5SZK8 3169 aa21.66■■□□□ 1.06
HOMER3-205ENST00000542541 OR10H2O60403 315 aa21.66■■□□□ 1.06
HOMER3-205ENST00000542541 CREG1O75629 220 aa21.66■■□□□ 1.06
HOMER3-205ENST00000542541 IFNA16P05015 189 aa21.66■■□□□ 1.06
HOMER3-205ENST00000542541 PGRP06401 933 aa21.66■■□□□ 1.06
HOMER3-205ENST00000542541 FEN1P39748 380 aaKnown RBP21.66■■□□□ 1.06
HOMER3-205ENST00000542541 KLF10Q13118 480 aa21.66■■□□□ 1.06
HOMER3-205ENST00000542541 CEBPEQ15744 281 aa21.66■■□□□ 1.06
HOMER3-205ENST00000542541 TMEM205Q6UW68 189 aa21.66■■□□□ 1.06
HOMER3-205ENST00000542541 ST13P4Q8IZP2 240 aaPredicted RBP21.66■■□□□ 1.06
HOMER3-205ENST00000542541 ZFP28Q8NHY6 868 aa21.66■■□□□ 1.06
HOMER3-205ENST00000542541 NAF1Q96HR8 494 aaKnown RBP21.66■■□□□ 1.06
HOMER3-205ENST00000542541 SLC45A3Q96JT2 553 aa21.66■■□□□ 1.06
HOMER3-205ENST00000542541 DGAT2Q96PD7 388 aa21.66■■□□□ 1.06
HOMER3-205ENST00000542541 MYLK2Q9H1R3 596 aa21.66■■□□□ 1.06
HOMER3-205ENST00000542541 ACSS1Q9NUB1 689 aaPredicted RBP21.66■■□□□ 1.06
HOMER3-205ENST00000542541 IL17BQ9UHF5 180 aa21.66■■□□□ 1.06
HOMER3-205ENST00000542541 MYO1GB0I1T2 1018 aa21.65■■□□□ 1.06
HOMER3-205ENST00000542541 STT3AP46977 705 aa21.65■■□□□ 1.06
HOMER3-205ENST00000542541 LRRC74AQ0VAA2 488 aa21.65■■□□□ 1.06
HOMER3-205ENST00000542541 RCAN2Q14206 197 aa21.65■■□□□ 1.06
HOMER3-205ENST00000542541 MAPRE2Q15555 327 aa21.65■■□□□ 1.06
HOMER3-205ENST00000542541 ZNF385BQ569K4 471 aa21.65■■□□□ 1.06
HOMER3-205ENST00000542541 FAM69BQ5VUD6 431 aa21.65■■□□□ 1.06
HOMER3-205ENST00000542541 FUNDC1Q8IVP5 155 aa21.65■■□□□ 1.06
HOMER3-205ENST00000542541 TSPEARQ8WU66 669 aa21.65■■□□□ 1.06
HOMER3-205ENST00000542541 NUDT8Q8WV74 236 aa21.65■■□□□ 1.06
HOMER3-205ENST00000542541 OR52E6Q96RD3 313 aa21.65■■□□□ 1.06
HOMER3-205ENST00000542541 FAM120CQ9NX05 1096 aaKnown RBP21.65■■□□□ 1.06
HOMER3-205ENST00000542541 ARMCX1Q9P291 453 aa21.65■■□□□ 1.06
HOMER3-205ENST00000542541 PRSS51A0A1B0GVH4 220 aa21.64■■□□□ 1.05
HOMER3-205ENST00000542541 C9JVG2 144 aa21.64■■□□□ 1.05
HOMER3-205ENST00000542541 TGFBR3LH3BV60 316 aa21.64■■□□□ 1.05
HOMER3-205ENST00000542541 GALNSP34059 522 aa21.64■■□□□ 1.05
HOMER3-205ENST00000542541 EFNA3P52797 238 aa21.64■■□□□ 1.05
HOMER3-205ENST00000542541 OR4D2P58180 307 aa21.64■■□□□ 1.05
HOMER3-205ENST00000542541 PRSS53Q2L4Q9 553 aa21.64■■□□□ 1.05
HOMER3-205ENST00000542541 OR4F3Q6IEY1 312 aa21.64■■□□□ 1.05
HOMER3-205ENST00000542541 FAM180BQ6P0A1 224 aa21.64■■□□□ 1.05
HOMER3-205ENST00000542541 ANKRD37Q7Z713 158 aa21.64■■□□□ 1.05
HOMER3-205ENST00000542541 VASH2Q86V25 355 aa21.64■■□□□ 1.05
HOMER3-205ENST00000542541 RAB43Q86YS6 212 aa21.64■■□□□ 1.05
HOMER3-205ENST00000542541 CCDC116Q8IYX3 515 aa21.64■■□□□ 1.05
HOMER3-205ENST00000542541 CIDECQ96AQ7 238 aaPredicted RBP21.64■■□□□ 1.05
HOMER3-205ENST00000542541 IP6K3Q96PC2 410 aa21.64■■□□□ 1.05
HOMER3-205ENST00000542541 TMEM121BQ9BXQ6 578 aaPredicted RBP21.64■■□□□ 1.05
HOMER3-205ENST00000542541 A0A1W2PRB8 838 aa21.63■■□□□ 1.05
HOMER3-205ENST00000542541 CCDC154A6NI56 674 aa21.63■■□□□ 1.05
HOMER3-205ENST00000542541 NR5A2O00482 541 aa21.63■■□□□ 1.05
HOMER3-205ENST00000542541 CFLARO15519 480 aa21.63■■□□□ 1.05
HOMER3-205ENST00000542541 RRP8O43159 456 aaKnown RBP21.63■■□□□ 1.05
HOMER3-205ENST00000542541 KLK10O43240 276 aa21.63■■□□□ 1.05
HOMER3-205ENST00000542541 DYRK3O43781 588 aa21.63■■□□□ 1.05
HOMER3-205ENST00000542541 ATP1B1P05026 303 aa21.63■■□□□ 1.05
HOMER3-205ENST00000542541 TNNI3P19429 210 aa21.63■■□□□ 1.05
HOMER3-205ENST00000542541 FRKP42685 505 aaPredicted RBP21.63■■□□□ 1.05
HOMER3-205ENST00000542541 ZFP36L2P47974 494 aaKnown RBP21.63■■□□□ 1.05
HOMER3-205ENST00000542541 NCBP2P52298 156 aaKnown RBP eCLIP21.63■■□□□ 1.05
HOMER3-205ENST00000542541 DGKQP52824 942 aa21.63■■□□□ 1.05
HOMER3-205ENST00000542541 MANFP55145 182 aaKnown RBP21.63■■□□□ 1.05
HOMER3-205ENST00000542541 ELAVL1Q15717 326 aaKnown RBP21.63■■□□□ 1.05
HOMER3-205ENST00000542541 ZNF750Q32MQ0 723 aa21.63■■□□□ 1.05
HOMER3-205ENST00000542541 MSANTD1Q6ZTZ1 278 aa21.63■■□□□ 1.05
HOMER3-205ENST00000542541 CPEB2Q7Z5Q1 589 aaKnown RBP21.63■■□□□ 1.05
HOMER3-205ENST00000542541 TMEM151BQ8IW70 566 aa21.63■■□□□ 1.05
HOMER3-205ENST00000542541 SPDL1Q96EA4 605 aa21.63■■□□□ 1.05
HOMER3-205ENST00000542541 RMND5AQ9H871 391 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms