RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 SHISA5Q8N114 240 aa17.56■□□□□ 0.4
VPS33A-205ENST00000541169 LGI4Q8N135 537 aa17.56■□□□□ 0.4
VPS33A-205ENST00000541169 NATD1Q8N6N6 113 aa17.56■□□□□ 0.4
VPS33A-205ENST00000541169 VMP1Q96GC9 406 aa17.56■□□□□ 0.4
VPS33A-205ENST00000541169 THOC3Q96J01 351 aaKnown RBP17.56■□□□□ 0.4
VPS33A-205ENST00000541169 LMF1Q96S06 567 aa17.56■□□□□ 0.4
VPS33A-205ENST00000541169 SMAD5Q99717 465 aaKnown RBP17.56■□□□□ 0.4
VPS33A-205ENST00000541169 ZNF395Q9H8N7 513 aaPredicted RBP17.56■□□□□ 0.4
VPS33A-205ENST00000541169 NOP53Q9NZM5 478 aaKnown RBP17.56■□□□□ 0.4
VPS33A-205ENST00000541169 PTGDR2Q9Y5Y4 395 aa17.56■□□□□ 0.4
VPS33A-205ENST00000541169 PGRMC2O15173 223 aa17.55■□□□□ 0.4
VPS33A-205ENST00000541169 PEX11AO75192 247 aa17.55■□□□□ 0.4
VPS33A-205ENST00000541169 SLITRK5O94991 958 aa17.55■□□□□ 0.4
VPS33A-205ENST00000541169 IL3P08700 152 aa17.55■□□□□ 0.4
VPS33A-205ENST00000541169 PORP16435 677 aaPredicted RBP17.55■□□□□ 0.4
VPS33A-205ENST00000541169 ALDH9A1P49189 494 aa17.55■□□□□ 0.4
VPS33A-205ENST00000541169 CLCN2P51788 898 aa17.55■□□□□ 0.4
VPS33A-205ENST00000541169 XKP51811 444 aa17.55■□□□□ 0.4
VPS33A-205ENST00000541169 ERVK-8P63133 956 aa17.55■□□□□ 0.4
VPS33A-205ENST00000541169 SPRED3Q2MJR0 410 aa17.55■□□□□ 0.4
VPS33A-205ENST00000541169 FAM71E1Q6IPT2 247 aa17.55■□□□□ 0.4
VPS33A-205ENST00000541169 OGFOD2Q6N063 350 aa17.55■□□□□ 0.4
VPS33A-205ENST00000541169 SLC5A8Q8N695 610 aa17.55■□□□□ 0.4
VPS33A-205ENST00000541169 FNDC5Q8NAU1 212 aa17.55■□□□□ 0.4
VPS33A-205ENST00000541169 OR8K3Q8NH51 312 aa17.55■□□□□ 0.4
VPS33A-205ENST00000541169 C9orf43Q8TAL5 461 aaPredicted RBP17.55■□□□□ 0.4
VPS33A-205ENST00000541169 ERP27Q96DN0 273 aa17.55■□□□□ 0.4
VPS33A-205ENST00000541169 EBPLQ9BY08 206 aa17.55■□□□□ 0.4
VPS33A-205ENST00000541169 TRIM55Q9BYV6 548 aa17.55■□□□□ 0.4
VPS33A-205ENST00000541169 PNPOQ9NVS9 261 aa17.55■□□□□ 0.4
VPS33A-205ENST00000541169 COPS7AQ9UBW8 275 aa17.55■□□□□ 0.4
VPS33A-205ENST00000541169 UTS2RQ9UKP6 389 aa17.55■□□□□ 0.4
VPS33A-205ENST00000541169 CES1P1Q9UKY3 287 aa17.55■□□□□ 0.4
VPS33A-205ENST00000541169 POLR3HQ9Y535 204 aaPredicted RBP17.55■□□□□ 0.4
VPS33A-205ENST00000541169 SCN2AQ99250 2005 aa17.55■□□□□ 0.4
VPS33A-205ENST00000541169 ATP6AP2A0A1C7CYW4 349 aa17.54■□□□□ 0.4
VPS33A-205ENST00000541169 GLOD5A6NK44 160 aa17.54■□□□□ 0.4
VPS33A-205ENST00000541169 C17orf105B2RV13 164 aa17.54■□□□□ 0.4
VPS33A-205ENST00000541169 TBX19O60806 448 aa17.54■□□□□ 0.4
VPS33A-205ENST00000541169 ATP6AP2O75787 350 aa17.54■□□□□ 0.4
VPS33A-205ENST00000541169 ATP1B1P05026 303 aa17.54■□□□□ 0.4
VPS33A-205ENST00000541169 FAM87AP0C7U9 286 aa17.54■□□□□ 0.4
VPS33A-205ENST00000541169 CPMP14384 443 aa17.54■□□□□ 0.4
VPS33A-205ENST00000541169 MPIP34949 423 aa17.54■□□□□ 0.4
VPS33A-205ENST00000541169 C2orf80Q0P641 193 aa17.54■□□□□ 0.4
VPS33A-205ENST00000541169 CHAF1BQ13112 559 aa17.54■□□□□ 0.4
VPS33A-205ENST00000541169 H3F3CQ6NXT2 135 aa17.54■□□□□ 0.4
VPS33A-205ENST00000541169 ISLR2Q6UXK2 745 aa17.54■□□□□ 0.4
VPS33A-205ENST00000541169 NFAM1Q8NET5 270 aaPredicted RBP17.54■□□□□ 0.4
VPS33A-205ENST00000541169 FDCSPQ8NFU4 85 aa17.54■□□□□ 0.4
VPS33A-205ENST00000541169 ELP5Q8TE02 316 aa17.54■□□□□ 0.4
VPS33A-205ENST00000541169 PTPMT1Q8WUK0 201 aaPredicted RBP17.54■□□□□ 0.4
VPS33A-205ENST00000541169 RIT1Q92963 219 aa17.54■□□□□ 0.4
VPS33A-205ENST00000541169 KLHL29Q96CT2 875 aa17.54■□□□□ 0.4
VPS33A-205ENST00000541169 ABHD17AQ96GS6 310 aa17.54■□□□□ 0.4
VPS33A-205ENST00000541169 C3orf30Q96M34 536 aa17.54■□□□□ 0.4
VPS33A-205ENST00000541169 PRPF18Q99633 342 aaKnown RBP17.54■□□□□ 0.4
VPS33A-205ENST00000541169 SIKE1Q9BRV8 207 aa17.54■□□□□ 0.4
VPS33A-205ENST00000541169 NUF2Q9BZD4 464 aa17.54■□□□□ 0.4
VPS33A-205ENST00000541169 SLC25A18Q9H1K4 315 aa17.54■□□□□ 0.4
VPS33A-205ENST00000541169 ABI3Q9P2A4 366 aa17.54■□□□□ 0.4
VPS33A-205ENST00000541169 ENTPD4Q9Y227 616 aa17.54■□□□□ 0.4
VPS33A-205ENST00000541169 IGHV3-20A0A0C4DH32 117 aa17.53■□□□□ 0.4
VPS33A-205ENST00000541169 TGFBR3LH3BV60 316 aa17.53■□□□□ 0.4
VPS33A-205ENST00000541169 BCKDHAP12694 445 aa17.53■□□□□ 0.4
VPS33A-205ENST00000541169 LBPP18428 481 aa17.53■□□□□ 0.4
VPS33A-205ENST00000541169 SDC1P18827 310 aa17.53■□□□□ 0.4
VPS33A-205ENST00000541169 PRPS1L1P21108 318 aa17.53■□□□□ 0.4
VPS33A-205ENST00000541169 Q0VFX4 171 aa17.53■□□□□ 0.4
VPS33A-205ENST00000541169 LACTB2Q53H82 288 aaPredicted RBP17.53■□□□□ 0.4
VPS33A-205ENST00000541169 IGFL3Q6UXB1 125 aa17.53■□□□□ 0.4
VPS33A-205ENST00000541169 SPATA19Q7Z5L4 167 aa17.53■□□□□ 0.4
VPS33A-205ENST00000541169 LRRC25Q8N386 305 aaPredicted RBP17.53■□□□□ 0.4
VPS33A-205ENST00000541169 OR1N1Q8NGS0 311 aa17.53■□□□□ 0.4
VPS33A-205ENST00000541169 FBXL20Q96IG2 436 aa17.53■□□□□ 0.4
VPS33A-205ENST00000541169 ZNF354BQ96LW1 612 aa17.53■□□□□ 0.4
VPS33A-205ENST00000541169 SEMA4CQ9C0C4 833 aa17.53■□□□□ 0.4
VPS33A-205ENST00000541169 EPS8L2Q9H6S3 715 aa17.53■□□□□ 0.4
VPS33A-205ENST00000541169 AKTIPQ9H8T0 292 aa17.53■□□□□ 0.4
VPS33A-205ENST00000541169 KCNK13Q9HB14 408 aa17.53■□□□□ 0.4
VPS33A-205ENST00000541169 SLC35C2Q9NQQ7 365 aa17.53■□□□□ 0.4
VPS33A-205ENST00000541169 ITPR1Q14643 2758 aa17.53■□□□□ 0.4
VPS33A-205ENST00000541169 PCSK5Q92824 1860 aa17.52■□□□□ 0.4
VPS33A-205ENST00000541169 A6NL46 340 aa17.52■□□□□ 0.4
VPS33A-205ENST00000541169 DPM1O60762 260 aa17.52■□□□□ 0.4
VPS33A-205ENST00000541169 PRKRAO75569 313 aaKnown RBP17.52■□□□□ 0.4
VPS33A-205ENST00000541169 ERAL1O75616 437 aaKnown RBP17.52■□□□□ 0.4
VPS33A-205ENST00000541169 BCAS2O75934 225 aaPredicted RBP17.52■□□□□ 0.4
VPS33A-205ENST00000541169 DNAJB5O75953 348 aa17.52■□□□□ 0.4
VPS33A-205ENST00000541169 IFI6P09912 130 aa17.52■□□□□ 0.4
VPS33A-205ENST00000541169 HPCAL1P37235 193 aa17.52■□□□□ 0.4
VPS33A-205ENST00000541169 C21orf58P58505 322 aa17.52■□□□□ 0.4
VPS33A-205ENST00000541169 IRX1P78414 480 aaPredicted RBP17.52■□□□□ 0.4
VPS33A-205ENST00000541169 CEBPEQ15744 281 aa17.52■□□□□ 0.4
VPS33A-205ENST00000541169 LARP4Q71RC2 724 aaKnown RBP eCLIP17.52■□□□□ 0.4
VPS33A-205ENST00000541169 OR4N5Q8IXE1 308 aa17.52■□□□□ 0.4
VPS33A-205ENST00000541169 GALNT12Q8IXK2 581 aa17.52■□□□□ 0.4
VPS33A-205ENST00000541169 ARMC10Q8N2F6 343 aa17.52■□□□□ 0.4
VPS33A-205ENST00000541169 OR7G1Q8NGA0 311 aa17.52■□□□□ 0.4
VPS33A-205ENST00000541169 OR5L2Q8NGL0 311 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms