RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 FAM69AQ5T7M9 428 aa14.34□□□□□ -0.11
SMARCA4-207ENST00000541122 MFSD8Q8NHS3 518 aa14.34□□□□□ -0.11
SMARCA4-207ENST00000541122 MMP28Q9H239 520 aa14.34□□□□□ -0.11
SMARCA4-207ENST00000541122 PCDHGA8Q9Y5G5 932 aa14.34□□□□□ -0.11
SMARCA4-207ENST00000541122 CACNG2Q9Y698 323 aa14.34□□□□□ -0.11
SMARCA4-207ENST00000541122 TMEM14AQ9Y6G1 99 aa14.34□□□□□ -0.11
SMARCA4-207ENST00000541122 IFNA2P01563 188 aa14.34□□□□□ -0.11
SMARCA4-207ENST00000541122 CNR2P34972 360 aa14.34□□□□□ -0.11
SMARCA4-207ENST00000541122 MAGEA11P43364 429 aa14.34□□□□□ -0.11
SMARCA4-207ENST00000541122 ART1P52961 327 aa14.34□□□□□ -0.11
SMARCA4-207ENST00000541122 PRMT2P55345 433 aa14.34□□□□□ -0.11
SMARCA4-207ENST00000541122 ARHGAP1Q07960 439 aa14.34□□□□□ -0.11
SMARCA4-207ENST00000541122 PCBP2Q15366 365 aaKnown RBP eCLIP14.34□□□□□ -0.118e-6■■□□□ 13.7
SMARCA4-207ENST00000541122 CNIH2Q6PI25 160 aa14.34□□□□□ -0.11
SMARCA4-207ENST00000541122 OR56A3Q8NH54 315 aa14.34□□□□□ -0.11
SMARCA4-207ENST00000541122 METTL21AQ8WXB1 218 aa14.34□□□□□ -0.11
SMARCA4-207ENST00000541122 RAB8BQ92930 207 aa14.34□□□□□ -0.11
SMARCA4-207ENST00000541122 ARL11Q969Q4 196 aa14.34□□□□□ -0.11
SMARCA4-207ENST00000541122 HS6ST2Q96MM7 605 aa14.34□□□□□ -0.11
SMARCA4-207ENST00000541122 GAL3ST4Q96RP7 486 aa14.34□□□□□ -0.11
SMARCA4-207ENST00000541122 CCDC86Q9H6F5 360 aaKnown RBP14.34□□□□□ -0.11
SMARCA4-207ENST00000541122 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.34□□□□□ -0.11
SMARCA4-207ENST00000541122 GSKIPQ9P0R6 139 aa14.34□□□□□ -0.11
SMARCA4-207ENST00000541122 IL36AQ9UHA7 158 aa14.34□□□□□ -0.11
SMARCA4-207ENST00000541122 MAFKO60675 156 aa14.34□□□□□ -0.11
SMARCA4-207ENST00000541122 NDUFV2P19404 249 aa14.34□□□□□ -0.11
SMARCA4-207ENST00000541122 OXTRP30559 389 aa14.34□□□□□ -0.11
SMARCA4-207ENST00000541122 ALG1LQ6GMV1 187 aa14.34□□□□□ -0.11
SMARCA4-207ENST00000541122 DGLUCYQ7Z3D6 616 aa14.34□□□□□ -0.11
SMARCA4-207ENST00000541122 SPRED1Q7Z699 444 aa14.34□□□□□ -0.11
SMARCA4-207ENST00000541122 PARP16Q8N5Y8 322 aa14.34□□□□□ -0.11
SMARCA4-207ENST00000541122 FAM86B1Q8N7N1 296 aa14.34□□□□□ -0.11
SMARCA4-207ENST00000541122 CCDC54Q8NEL0 328 aa14.34□□□□□ -0.11
SMARCA4-207ENST00000541122 OR8S1Q8NH09 359 aa14.34□□□□□ -0.11
SMARCA4-207ENST00000541122 MOCOSQ96EN8 888 aa14.34□□□□□ -0.11
SMARCA4-207ENST00000541122 OR51J1Q9H342 316 aa14.34□□□□□ -0.11
SMARCA4-207ENST00000541122 A0A0G2JMP0 313 aa14.34□□□□□ -0.11
SMARCA4-207ENST00000541122 EIF3FO00303 357 aaPredicted RBP14.34□□□□□ -0.11
SMARCA4-207ENST00000541122 NDUFS4O43181 175 aa14.34□□□□□ -0.11
SMARCA4-207ENST00000541122 GCGRP47871 477 aa14.34□□□□□ -0.11
SMARCA4-207ENST00000541122 TMEM205Q6UW68 189 aa14.34□□□□□ -0.11
SMARCA4-207ENST00000541122 OR4M2Q8NGB6 313 aa14.34□□□□□ -0.11
SMARCA4-207ENST00000541122 OR13F1Q8NGS4 319 aa14.34□□□□□ -0.11
SMARCA4-207ENST00000541122 NETO1Q8TDF5 533 aa14.34□□□□□ -0.11
SMARCA4-207ENST00000541122 TESCQ96BS2 214 aa14.34□□□□□ -0.11
SMARCA4-207ENST00000541122 P2RY13Q9BPV8 354 aa14.34□□□□□ -0.11
SMARCA4-207ENST00000541122 CENPMQ9NSP4 180 aa14.34□□□□□ -0.11
SMARCA4-207ENST00000541122 GRHPRQ9UBQ7 328 aa14.34□□□□□ -0.11
SMARCA4-207ENST00000541122 EDNRBP24530 442 aa14.33□□□□□ -0.11
SMARCA4-207ENST00000541122 S100PP25815 95 aa14.33□□□□□ -0.11
SMARCA4-207ENST00000541122 CTNNB1P35222 781 aa14.33□□□□□ -0.11
SMARCA4-207ENST00000541122 MRPS10P82664 201 aaKnown RBP14.33□□□□□ -0.11
SMARCA4-207ENST00000541122 GALEQ14376 348 aa14.33□□□□□ -0.11
SMARCA4-207ENST00000541122 SLC35F1Q5T1Q4 408 aa14.33□□□□□ -0.11
SMARCA4-207ENST00000541122 ZNF550Q7Z398 422 aa14.33□□□□□ -0.11
SMARCA4-207ENST00000541122 SLC7A13Q8TCU3 470 aa14.33□□□□□ -0.11
SMARCA4-207ENST00000541122 PTERQ96BW5 349 aa14.33□□□□□ -0.11
SMARCA4-207ENST00000541122 EMCNQ9ULC0 261 aa14.33□□□□□ -0.11
SMARCA4-207ENST00000541122 KAT6AQ92794 2004 aa14.33□□□□□ -0.12
SMARCA4-207ENST00000541122 UPK3BL1B0FP48 263 aa14.33□□□□□ -0.12
SMARCA4-207ENST00000541122 UPK3BL2E5RIL1 263 aa14.33□□□□□ -0.12
SMARCA4-207ENST00000541122 FAM72CH0Y354 149 aa14.33□□□□□ -0.12
SMARCA4-207ENST00000541122 RPL35P42766 123 aaKnown RBP14.33□□□□□ -0.12
SMARCA4-207ENST00000541122 ALDH3B2P48448 385 aa14.33□□□□□ -0.12
SMARCA4-207ENST00000541122 FAM72AQ5TYM5 149 aa14.33□□□□□ -0.12
SMARCA4-207ENST00000541122 FAM72DQ6L9T8 149 aa14.33□□□□□ -0.12
SMARCA4-207ENST00000541122 FAM72BQ86X60 149 aa14.33□□□□□ -0.12
SMARCA4-207ENST00000541122 ELMOD3Q96FG2 381 aa14.33□□□□□ -0.12
SMARCA4-207ENST00000541122 HDHD5Q9BXW7 423 aa14.33□□□□□ -0.12
SMARCA4-207ENST00000541122 UBR1Q8IWV7 1749 aa14.33□□□□□ -0.12
SMARCA4-207ENST00000541122 PPM1BO75688 479 aa14.33□□□□□ -0.12
SMARCA4-207ENST00000541122 TFP02787 698 aa14.33□□□□□ -0.12
SMARCA4-207ENST00000541122 C1GALT1C1LP0DN25 315 aa14.33□□□□□ -0.12
SMARCA4-207ENST00000541122 PYCR1P32322 319 aa14.33□□□□□ -0.12
SMARCA4-207ENST00000541122 IRF5Q13568 498 aa14.33□□□□□ -0.12
SMARCA4-207ENST00000541122 PTPRCAPQ14761 206 aa14.33□□□□□ -0.12
SMARCA4-207ENST00000541122 LRRC37A5PQ49AS3 106 aa14.33□□□□□ -0.12
SMARCA4-207ENST00000541122 PAGE3Q5JUK9 113 aa14.33□□□□□ -0.12
SMARCA4-207ENST00000541122 CES4AQ5XG92 561 aa14.33□□□□□ -0.12
SMARCA4-207ENST00000541122 PSRC1Q6PGN9 363 aaPredicted RBP14.33□□□□□ -0.12
SMARCA4-207ENST00000541122 GTPBP8Q8N3Z3 284 aaPredicted RBP14.33□□□□□ -0.12
SMARCA4-207ENST00000541122 ACTL8Q9H568 366 aa14.33□□□□□ -0.12
SMARCA4-207ENST00000541122 FBXL3Q9UKT7 428 aa14.33□□□□□ -0.12
SMARCA4-207ENST00000541122 SARDHQ9UL12 918 aa14.33□□□□□ -0.12
SMARCA4-207ENST00000541122 ACSL5Q9ULC5 683 aa14.33□□□□□ -0.12
SMARCA4-207ENST00000541122 TMEM150CB9EJG8 249 aa14.33□□□□□ -0.12
SMARCA4-207ENST00000541122 CSTBP04080 98 aaKnown RBP14.33□□□□□ -0.12
SMARCA4-207ENST00000541122 SP2Q02086 613 aa14.33□□□□□ -0.12
SMARCA4-207ENST00000541122 CPZQ66K79 652 aa14.33□□□□□ -0.12
SMARCA4-207ENST00000541122 ARHGAP11AQ6P4F7 1023 aa14.33□□□□□ -0.12
SMARCA4-207ENST00000541122 KCTD18Q6PI47 426 aaPredicted RBP14.33□□□□□ -0.12
SMARCA4-207ENST00000541122 LARP4Q71RC2 724 aaKnown RBP eCLIP14.33□□□□□ -0.12
SMARCA4-207ENST00000541122 VTCN1Q7Z7D3 282 aa14.33□□□□□ -0.12
SMARCA4-207ENST00000541122 FKBP10Q96AY3 582 aa14.33□□□□□ -0.12
SMARCA4-207ENST00000541122 C7orf34Q96L11 122 aa14.33□□□□□ -0.12
SMARCA4-207ENST00000541122 OR10A4Q9H209 315 aa14.33□□□□□ -0.12
SMARCA4-207ENST00000541122 NANSQ9NR45 359 aa14.33□□□□□ -0.12
SMARCA4-207ENST00000541122 SULT1C2O00338 296 aa14.32□□□□□ -0.12
SMARCA4-207ENST00000541122 FXYD6P3P58550 94 aa14.32□□□□□ -0.12
SMARCA4-207ENST00000541122 GFOD2Q3B7J2 385 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms