RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 NADK2Q4G0N4 442 aa15.95■□□□□ 0.14
COPS3-212ENST00000539941 OGFRL1Q5TC84 451 aaPredicted RBP15.95■□□□□ 0.14
COPS3-212ENST00000539941 ASCL5Q7RTU5 278 aa15.95■□□□□ 0.14
COPS3-212ENST00000539941 KANSL1Q7Z3B3 1105 aa15.95■□□□□ 0.14
COPS3-212ENST00000539941 MCATQ8IVS2 390 aaKnown RBP15.95■□□□□ 0.14
COPS3-212ENST00000539941 SAMD14Q8IZD0 417 aaPredicted RBP15.95■□□□□ 0.14
COPS3-212ENST00000539941 EID3Q8N140 333 aa15.95■□□□□ 0.14
COPS3-212ENST00000539941 LILRA2Q8N149 483 aa15.95■□□□□ 0.14
COPS3-212ENST00000539941 TMEM102Q8N9M5 508 aaPredicted RBP15.95■□□□□ 0.14
COPS3-212ENST00000539941 ADCY4Q8NFM4 1077 aa15.95■□□□□ 0.14
COPS3-212ENST00000539941 CEP76Q8TAP6 659 aa15.95■□□□□ 0.14
COPS3-212ENST00000539941 NCLNQ969V3 563 aa15.95■□□□□ 0.14
COPS3-212ENST00000539941 PKP2Q99959 881 aa15.95■□□□□ 0.14
COPS3-212ENST00000539941 MAPKAP1Q9BPZ7 522 aa15.95■□□□□ 0.14
COPS3-212ENST00000539941 UGT2B28Q9BY64 529 aa15.95■□□□□ 0.14
COPS3-212ENST00000539941 FAM60AQ9NP50 221 aa15.95■□□□□ 0.14
COPS3-212ENST00000539941 GIMAP4Q9NUV9 329 aa15.95■□□□□ 0.14
COPS3-212ENST00000539941 AURKCQ9UQB9 309 aa15.95■□□□□ 0.14
COPS3-212ENST00000539941 MYO1GB0I1T2 1018 aa15.95■□□□□ 0.14
COPS3-212ENST00000539941 SH3BP5O60239 455 aa15.95■□□□□ 0.14
COPS3-212ENST00000539941 ALPPL2P10696 532 aa15.95■□□□□ 0.14
COPS3-212ENST00000539941 TLX1P31314 330 aaPredicted RBP15.95■□□□□ 0.14
COPS3-212ENST00000539941 SOAT1P35610 550 aa15.95■□□□□ 0.14
COPS3-212ENST00000539941 MVDP53602 400 aa15.95■□□□□ 0.14
COPS3-212ENST00000539941 VSX2P58304 361 aaPredicted RBP15.95■□□□□ 0.14
COPS3-212ENST00000539941 TNFRSF17Q02223 184 aa15.95■□□□□ 0.14
COPS3-212ENST00000539941 RBBP4Q09028 425 aa15.95■□□□□ 0.14
COPS3-212ENST00000539941 CEBPEQ15744 281 aa15.95■□□□□ 0.14
COPS3-212ENST00000539941 CLPPQ16740 277 aaPredicted RBP15.95■□□□□ 0.14
COPS3-212ENST00000539941 DEFB134Q4QY38 66 aa15.95■□□□□ 0.14
COPS3-212ENST00000539941 SFT2D3Q587I9 215 aa15.95■□□□□ 0.14
COPS3-212ENST00000539941 NIPAL1Q6NVV3 410 aa15.95■□□□□ 0.14
COPS3-212ENST00000539941 ERMP1Q7Z2K6 904 aa15.95■□□□□ 0.14
COPS3-212ENST00000539941 PTOV1Q86YD1 416 aa15.95■□□□□ 0.14
COPS3-212ENST00000539941 SCAIQ8N9R8 606 aa15.95■□□□□ 0.14
COPS3-212ENST00000539941 OR6C4Q8NGE1 309 aa15.95■□□□□ 0.14
COPS3-212ENST00000539941 AHCYL2Q96HN2 611 aaKnown RBP15.95■□□□□ 0.14
COPS3-212ENST00000539941 COX4I2Q96KJ9 171 aa15.95■□□□□ 0.14
COPS3-212ENST00000539941 BBS4Q96RK4 519 aa15.95■□□□□ 0.14
COPS3-212ENST00000539941 NPLQ9BXD5 320 aaPredicted RBP15.95■□□□□ 0.14
COPS3-212ENST00000539941 EPS8L2Q9H6S3 715 aa15.95■□□□□ 0.14
COPS3-212ENST00000539941 CXorf36Q9H7Y0 433 aa15.95■□□□□ 0.14
COPS3-212ENST00000539941 DCAF13Q9NV06 445 aaKnown RBP15.95■□□□□ 0.14
COPS3-212ENST00000539941 KCMF1Q9P0J7 381 aa15.95■□□□□ 0.14
COPS3-212ENST00000539941 C5AR2Q9P296 337 aa15.95■□□□□ 0.14
COPS3-212ENST00000539941 ENTPD4Q9Y227 616 aa15.95■□□□□ 0.14
COPS3-212ENST00000539941 PI4KAP42356 2102 aa15.94■□□□□ 0.14
COPS3-212ENST00000539941 IGHV1OR21-1A0A087WYE8 117 aa15.94■□□□□ 0.14
COPS3-212ENST00000539941 RNF103-CHMP3A0A140T963 221 aa15.94■□□□□ 0.14
COPS3-212ENST00000539941 DUX1O43812 170 aa15.94■□□□□ 0.14
COPS3-212ENST00000539941 OR6B1O95007 311 aa15.94■□□□□ 0.14
COPS3-212ENST00000539941 NTRK1P04629 796 aa15.94■□□□□ 0.14
COPS3-212ENST00000539941 SP9P0CG40 484 aa15.94■□□□□ 0.14
COPS3-212ENST00000539941 ALDH4A1P30038 563 aa15.94■□□□□ 0.14
COPS3-212ENST00000539941 PPM1FP49593 454 aaPredicted RBP15.94■□□□□ 0.14
COPS3-212ENST00000539941 SKP1P63208 163 aa15.94■□□□□ 0.14
COPS3-212ENST00000539941 APOFQ13790 326 aa15.94■□□□□ 0.14
COPS3-212ENST00000539941 BCL2A1Q16548 175 aa15.94■□□□□ 0.14
COPS3-212ENST00000539941 PRTGQ2VWP7 1150 aa15.94■□□□□ 0.14
COPS3-212ENST00000539941 FAM98BQ52LJ0 330 aaKnown RBP15.94■□□□□ 0.14
COPS3-212ENST00000539941 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.94■□□□□ 0.14
COPS3-212ENST00000539941 FAM92BQ6ZTR7 304 aa15.94■□□□□ 0.14
COPS3-212ENST00000539941 C11orf65Q8NCR3 313 aa15.94■□□□□ 0.14
COPS3-212ENST00000539941 PNPT1Q8TCS8 783 aaKnown RBP15.94■□□□□ 0.14
COPS3-212ENST00000539941 SNRNP27Q8WVK2 155 aaKnown RBP15.94■□□□□ 0.14
COPS3-212ENST00000539941 KLHL6Q8WZ60 621 aa15.94■□□□□ 0.14
COPS3-212ENST00000539941 NEURL3Q96EH8 262 aa15.94■□□□□ 0.14
COPS3-212ENST00000539941 ZNF285Q96NJ3 590 aa15.94■□□□□ 0.14
COPS3-212ENST00000539941 AMDHD1Q96NU7 426 aa15.94■□□□□ 0.14
COPS3-212ENST00000539941 TGM7Q96PF1 710 aa15.94■□□□□ 0.14
COPS3-212ENST00000539941 DPH2Q9BQC3 489 aaPredicted RBP15.94■□□□□ 0.14
COPS3-212ENST00000539941 TBC1D23Q9NUY8 699 aa15.94■□□□□ 0.14
COPS3-212ENST00000539941 RSL24D1Q9UHA3 163 aaKnown RBP15.94■□□□□ 0.14
COPS3-212ENST00000539941 DAPP1Q9UN19 280 aa15.94■□□□□ 0.14
COPS3-212ENST00000539941 PLCL2Q9UPR0 1127 aa15.94■□□□□ 0.14
COPS3-212ENST00000539941 DTNAQ9Y4J8 743 aa15.94■□□□□ 0.14
COPS3-212ENST00000539941 SPACA6W5XKT8 324 aa15.94■□□□□ 0.14
COPS3-212ENST00000539941 CFAP54Q96N23 3096 aa15.94■□□□□ 0.14
COPS3-212ENST00000539941 RIF1Q5UIP0 2472 aaKnown RBP15.93■□□□□ 0.14
COPS3-212ENST00000539941 PGRMC2O15173 223 aa15.93■□□□□ 0.14
COPS3-212ENST00000539941 GFRA3O60609 400 aa15.93■□□□□ 0.14
COPS3-212ENST00000539941 GALR3O60755 368 aaPredicted RBP15.93■□□□□ 0.14
COPS3-212ENST00000539941 TNFRSF21O75509 655 aa15.93■□□□□ 0.14
COPS3-212ENST00000539941 ZBTB11O95625 1053 aaPredicted RBP15.93■□□□□ 0.14
COPS3-212ENST00000539941 BMP2P12643 396 aa15.93■□□□□ 0.14
COPS3-212ENST00000539941 PNLIPP16233 465 aa15.93■□□□□ 0.14
COPS3-212ENST00000539941 CSNK2A2P19784 350 aaPredicted RBP15.93■□□□□ 0.14
COPS3-212ENST00000539941 CPN2P22792 545 aa15.93■□□□□ 0.14
COPS3-212ENST00000539941 S100A1P23297 94 aa15.93■□□□□ 0.14
COPS3-212ENST00000539941 FASP25445 335 aa15.93■□□□□ 0.14
COPS3-212ENST00000539941 PEX2P28328 305 aa15.93■□□□□ 0.14
COPS3-212ENST00000539941 PCGF2P35227 344 aa15.93■□□□□ 0.14
COPS3-212ENST00000539941 CDK9P50750 372 aaKnown RBP15.93■□□□□ 0.14
COPS3-212ENST00000539941 AQP4P55087 323 aa15.93■□□□□ 0.14
COPS3-212ENST00000539941 LIM2P55344 173 aa15.93■□□□□ 0.14
COPS3-212ENST00000539941 GFERP55789 205 aa15.93■□□□□ 0.14
COPS3-212ENST00000539941 HLA-BQ31612 363 aa15.93■□□□□ 0.14
COPS3-212ENST00000539941 GCNT6Q5T4J0 391 aa15.93■□□□□ 0.14
COPS3-212ENST00000539941 SAXO2Q658L1 398 aa15.93■□□□□ 0.14
COPS3-212ENST00000539941 C18orf63Q68DL7 685 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms