RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 MAP10Q9P2G4 905 aa11.12□□□□□ -0.63
VTN-202ENST00000539746 PRODH2Q9UF12 536 aa11.12□□□□□ -0.63
VTN-202ENST00000539746 ANGPT4Q9Y264 503 aa11.12□□□□□ -0.63
VTN-202ENST00000539746 ATG4BQ9Y4P1 393 aa11.12□□□□□ -0.63
VTN-202ENST00000539746 PCDHGA8Q9Y5G5 932 aa11.12□□□□□ -0.63
VTN-202ENST00000539746 SNX13Q9Y5W8 968 aa11.12□□□□□ -0.63
VTN-202ENST00000539746 SNX8Q9Y5X2 465 aa11.12□□□□□ -0.63
VTN-202ENST00000539746 TP53BP1Q12888 1972 aaPredicted RBP11.11□□□□□ -0.63
VTN-202ENST00000539746 RNF103-CHMP3A0A140T963 221 aa11.11□□□□□ -0.63
VTN-202ENST00000539746 ELOVL7A1L3X0 281 aa11.11□□□□□ -0.63
VTN-202ENST00000539746 EFCAB7A8K855 629 aa11.11□□□□□ -0.63
VTN-202ENST00000539746 RDH16O75452 317 aa11.11□□□□□ -0.63
VTN-202ENST00000539746 ONECUT2O95948 504 aa11.11□□□□□ -0.63
VTN-202ENST00000539746 GPIP06744 558 aa11.11□□□□□ -0.63
VTN-202ENST00000539746 CPMP14384 443 aa11.11□□□□□ -0.63
VTN-202ENST00000539746 HOXB3P14651 431 aaPredicted RBP11.11□□□□□ -0.63
VTN-202ENST00000539746 FOLR1P15328 257 aa11.11□□□□□ -0.63
VTN-202ENST00000539746 GPX2P18283 190 aa11.11□□□□□ -0.63
VTN-202ENST00000539746 XCR1P46094 333 aa11.11□□□□□ -0.63
VTN-202ENST00000539746 CCT3P49368 545 aaKnown RBP11.11□□□□□ -0.63
VTN-202ENST00000539746 ACTR3P61158 418 aa11.11□□□□□ -0.63
VTN-202ENST00000539746 LIPEQ05469 1076 aa11.11□□□□□ -0.63
VTN-202ENST00000539746 DEFB110Q30KQ9 67 aa11.11□□□□□ -0.63
VTN-202ENST00000539746 IRAK1BP1Q5VVH5 260 aa11.11□□□□□ -0.63
VTN-202ENST00000539746 DLEU7Q6UYE1 221 aa11.11□□□□□ -0.63
VTN-202ENST00000539746 PIP4P1Q86T03 277 aa11.11□□□□□ -0.63
VTN-202ENST00000539746 RETREG3Q86VR2 466 aa11.11□□□□□ -0.63
VTN-202ENST00000539746 PTRH1Q86Y79 214 aaKnown RBP11.11□□□□□ -0.63
VTN-202ENST00000539746 OR7G1Q8NGA0 311 aa11.11□□□□□ -0.63
VTN-202ENST00000539746 OR9A4Q8NGU2 314 aa11.11□□□□□ -0.63
VTN-202ENST00000539746 OR51Q1Q8NH59 317 aa11.11□□□□□ -0.63
VTN-202ENST00000539746 OR1L3Q8NH93 324 aa11.11□□□□□ -0.63
VTN-202ENST00000539746 NEURL3Q96EH8 262 aa11.11□□□□□ -0.63
VTN-202ENST00000539746 C10orf90Q96M02 699 aa11.11□□□□□ -0.63
VTN-202ENST00000539746 AMDHD1Q96NU7 426 aa11.11□□□□□ -0.63
VTN-202ENST00000539746 ZNF607Q96SK3 696 aa11.11□□□□□ -0.63
VTN-202ENST00000539746 MAPKAP1Q9BPZ7 522 aa11.11□□□□□ -0.63
VTN-202ENST00000539746 YIPF2Q9BWQ6 316 aa11.11□□□□□ -0.63
VTN-202ENST00000539746 UGT2B28Q9BY64 529 aa11.11□□□□□ -0.63
VTN-202ENST00000539746 PAIP1Q9H074 479 aaKnown RBP11.11□□□□□ -0.63
VTN-202ENST00000539746 TMEM38AQ9H6F2 299 aa11.11□□□□□ -0.63
VTN-202ENST00000539746 DCLRE1BQ9H816 532 aa11.11□□□□□ -0.63
VTN-202ENST00000539746 RXFP3Q9NSD7 469 aa11.11□□□□□ -0.63
VTN-202ENST00000539746 ADPRHL2Q9NX46 363 aa11.11□□□□□ -0.63
VTN-202ENST00000539746 TEX10Q9NXF1 929 aaPredicted RBP11.11□□□□□ -0.63
VTN-202ENST00000539746 SLC39A1Q9NY26 324 aa11.11□□□□□ -0.63
VTN-202ENST00000539746 P2RX2Q9UBL9 471 aa11.11□□□□□ -0.63
VTN-202ENST00000539746 TRPC4Q9UBN4 977 aa11.11□□□□□ -0.63
VTN-202ENST00000539746 COPS7AQ9UBW8 275 aa11.11□□□□□ -0.63
VTN-202ENST00000539746 BAG5Q9UL15 447 aa11.11□□□□□ -0.63
VTN-202ENST00000539746 ATXN7L1Q9ULK2 861 aaPredicted RBP11.11□□□□□ -0.63
VTN-202ENST00000539746 SAMD4AQ9UPU9 718 aaKnown RBP11.11□□□□□ -0.63
VTN-202ENST00000539746 BTBD3Q9Y2F9 522 aa11.11□□□□□ -0.63
VTN-202ENST00000539746 PCDHB14Q9Y5E9 798 aa11.11□□□□□ -0.63
VTN-202ENST00000539746 ARHGEF17Q96PE2 2063 aaPredicted RBP11.11□□□□□ -0.63
VTN-202ENST00000539746 PRORSD1PA6NEY8 169 aa11.1□□□□□ -0.63
VTN-202ENST00000539746 SGK494L7N484 410 aa11.1□□□□□ -0.63
VTN-202ENST00000539746 CYR61O00622 381 aa11.1□□□□□ -0.63
VTN-202ENST00000539746 PLOD3O60568 738 aa11.1□□□□□ -0.63
VTN-202ENST00000539746 PRAMEF2O60811 474 aa11.1□□□□□ -0.63
VTN-202ENST00000539746 SERPINB7O75635 380 aa11.1□□□□□ -0.63
VTN-202ENST00000539746 C6orf47O95873 294 aa11.1□□□□□ -0.63
VTN-202ENST00000539746 CRATP43155 626 aa11.1□□□□□ -0.63
VTN-202ENST00000539746 PSMD4P55036 377 aaKnown RBP11.1□□□□□ -0.63
VTN-202ENST00000539746 DCAF7P61962 342 aa11.1□□□□□ -0.63
VTN-202ENST00000539746 SHC2P98077 582 aa11.1□□□□□ -0.63
VTN-202ENST00000539746 CFHR1Q03591 330 aa11.1□□□□□ -0.63
VTN-202ENST00000539746 HSPB3Q12988 150 aa11.1□□□□□ -0.63
VTN-202ENST00000539746 PAGE3Q5JUK9 113 aa11.1□□□□□ -0.63
VTN-202ENST00000539746 GCNT6Q5T4J0 391 aa11.1□□□□□ -0.63
VTN-202ENST00000539746 MFSD4BQ5TF39 518 aa11.1□□□□□ -0.63
VTN-202ENST00000539746 CPZQ66K79 652 aa11.1□□□□□ -0.63
VTN-202ENST00000539746 PGM2L1Q6PCE3 622 aa11.1□□□□□ -0.63
VTN-202ENST00000539746 RAB11FIP2Q7L804 512 aa11.1□□□□□ -0.63
VTN-202ENST00000539746 PATL1Q86TB9 770 aaKnown RBP11.1□□□□□ -0.63
VTN-202ENST00000539746 GALNT12Q8IXK2 581 aa11.1□□□□□ -0.63
VTN-202ENST00000539746 KBTBD2Q8IY47 623 aa11.1□□□□□ -0.63
VTN-202ENST00000539746 KIF2BQ8N4N8 673 aa11.1□□□□□ -0.63
VTN-202ENST00000539746 ARHGEF39Q8N4T4 335 aa11.1□□□□□ -0.63
VTN-202ENST00000539746 CDRT4Q8N9R6 151 aa11.1□□□□□ -0.63
VTN-202ENST00000539746 OR2I1PQ8NGU4 316 aa11.1□□□□□ -0.63
VTN-202ENST00000539746 OR14A16Q8NHC5 309 aa11.1□□□□□ -0.63
VTN-202ENST00000539746 TMEM125Q96AQ2 219 aa11.1□□□□□ -0.63
VTN-202ENST00000539746 MIEF2Q96C03 454 aa11.1□□□□□ -0.63
VTN-202ENST00000539746 NSMCE2Q96MF7 247 aa11.1□□□□□ -0.63
VTN-202ENST00000539746 NRTNQ99748 197 aa11.1□□□□□ -0.63
VTN-202ENST00000539746 SORBS1Q9BX66 1292 aaKnown RBP11.1□□□□□ -0.63
VTN-202ENST00000539746 SPRTNQ9H040 489 aaPredicted RBP11.1□□□□□ -0.63
VTN-202ENST00000539746 SLC26A1Q9H2B4 701 aa11.1□□□□□ -0.63
VTN-202ENST00000539746 VCXQ9H320 206 aa11.1□□□□□ -0.63
VTN-202ENST00000539746 SMOC1Q9H4F8 434 aa11.1□□□□□ -0.63
VTN-202ENST00000539746 KAT8Q9H7Z6 458 aaKnown RBP11.1□□□□□ -0.63
VTN-202ENST00000539746 GORASP2Q9H8Y8 452 aa11.1□□□□□ -0.63
VTN-202ENST00000539746 SERHLQ9NQF3 203 aa11.1□□□□□ -0.63
VTN-202ENST00000539746 C8orf4Q9NR00 106 aa11.1□□□□□ -0.63
VTN-202ENST00000539746 POLE3Q9NRF9 147 aa11.1□□□□□ -0.63
VTN-202ENST00000539746 ZCCHC3Q9NUD5 404 aaKnown RBP11.1□□□□□ -0.63
VTN-202ENST00000539746 SIDT1Q9NXL6 827 aaKnown RBP11.1□□□□□ -0.63
VTN-202ENST00000539746 IFT80Q9P2H3 777 aaPredicted RBP11.1□□□□□ -0.63
VTN-202ENST00000539746 PCDHGA3Q9Y5H0 932 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms