RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 SLC5A7Q9GZV3 580 aa6.21□□□□□ -1.41
LSAMP-207ENST00000539563 FARSAQ9Y285 508 aaKnown RBP6.21□□□□□ -1.41
LSAMP-207ENST00000539563 SH3D21A4FU49 640 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 IGLON5A6NGN9 336 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 SDHDO14521 159 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 ZNF217O75362 1048 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 OAZ2O95190 189 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 CBLP22681 906 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 OR1E2P47887 323 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 CAPZA1P52907 286 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 CDK10Q15131 360 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 SLC35F1Q5T1Q4 408 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 C3P1Q6ZMU1 363 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 DPY19L3Q6ZPD9 716 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 ZNF431Q8TF32 576 aaPredicted RBP6.21□□□□□ -1.42
LSAMP-207ENST00000539563 SMARCD2Q92925 531 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 RNF186Q9NXI6 227 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 HCN2Q9UL51 889 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 SLC22A31A6NKX4 558 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 TTLL8A6PVC2 850 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 RBBP9O75884 186 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 S100A2P29034 98 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 KDELR2P33947 212 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 RAB28P51157 221 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 RIDAP52758 137 aaKnown RBP6.21□□□□□ -1.42
LSAMP-207ENST00000539563 JAG1P78504 1218 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 FOXK1P85037 733 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 RUNX3Q13761 415 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 NFE2L1Q14494 772 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 ANKDD1AQ495B1 522 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 RABL3Q5HYI8 236 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 XKRXQ6PP77 449 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 C6orf120Q7Z4R8 191 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 TMED4Q7Z7H5 227 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 SEC14L1Q92503 715 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 FOXJ1Q92949 421 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 NINJ1Q92982 152 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 C12orf43Q96C57 262 aaKnown RBP6.21□□□□□ -1.42
LSAMP-207ENST00000539563 SLC7A6OSQ96CW6 309 aaPredicted RBP6.21□□□□□ -1.42
LSAMP-207ENST00000539563 TMEM41AQ96HV5 264 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 CDCA3Q99618 268 aaPredicted RBP6.21□□□□□ -1.42
LSAMP-207ENST00000539563 OR8D2Q9GZM6 311 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 RANBP3Q9H6Z4 567 aaPredicted RBP6.21□□□□□ -1.42
LSAMP-207ENST00000539563 MEPEQ9NQ76 525 aaPredicted RBP6.21□□□□□ -1.42
LSAMP-207ENST00000539563 HPF1Q9NWY4 346 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 DHDHQ9UQ10 334 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 A0A0G2JPF8 293 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 HNRNPCL3B7ZW38 293 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 UGDHO60701 494 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 RGS9O75916 674 aaPredicted RBP6.21□□□□□ -1.42
LSAMP-207ENST00000539563 BEST1O76090 585 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 HNRNPCL4P0DMR1 293 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 PORP16435 677 aaPredicted RBP6.21□□□□□ -1.42
LSAMP-207ENST00000539563 CDKN2DP55273 166 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 OR4D2P58180 307 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 RAB33AQ14088 237 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 ABRAXAS2Q15018 415 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 METTL2BQ6P1Q9 378 aaKnown RBP6.21□□□□□ -1.42
LSAMP-207ENST00000539563 MRPL10Q7Z7H8 261 aaKnown RBP6.21□□□□□ -1.42
LSAMP-207ENST00000539563 CSNK1A1LQ8N752 337 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 OR5T2Q8NGG2 359 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 OR13C3Q8NGS6 347 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 OR52P1PQ8NH57 321 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 PXYLP1Q8TE99 480 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 PGAP3Q96FM1 320 aaPredicted RBP6.21□□□□□ -1.42
LSAMP-207ENST00000539563 SH3YL1Q96HL8 342 aaPredicted RBP6.21□□□□□ -1.42
LSAMP-207ENST00000539563 WACQ9BTA9 647 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 MROQ9BYG7 248 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 ZNF350Q9GZX5 532 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 MYNNQ9NPC7 610 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 VNN3Q9NY84 501 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 PPP4R1LQ9P1A2 415 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 SUSD2Q9UGT4 822 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 CYP8B1Q9UNU6 501 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 IGKV6D-21A0A0A0MT36 114 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 TEX13DA0A0J9YY54 714 aaPredicted RBP6.21□□□□□ -1.42
LSAMP-207ENST00000539563 LILRB3O75022 631 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 SLC10A3P09131 477 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 FRKP42685 505 aaPredicted RBP6.21□□□□□ -1.42
LSAMP-207ENST00000539563 MAGEA2P43356 314 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 STK19P49842 368 aaPredicted RBP6.21□□□□□ -1.42
LSAMP-207ENST00000539563 VMACQ2NL98 169 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 OR52E8Q6IFG1 317 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 DCDC5Q6ZRR9 648 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 RPS27LQ71UM5 84 aaKnown RBP6.21□□□□□ -1.42
LSAMP-207ENST00000539563 HUS1BQ8NHY5 278 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 URM1Q9BTM9 101 aaKnown RBP6.21□□□□□ -1.42
LSAMP-207ENST00000539563 CCDC86Q9H6F5 360 aaKnown RBP6.21□□□□□ -1.42
LSAMP-207ENST00000539563 A0A1W2PQU0 124 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 PRKYO43930 277 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 SOX9P48436 509 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 AFF1P51825 1210 aaKnown RBP6.21□□□□□ -1.42
LSAMP-207ENST00000539563 LAS2Q8IYD9 372 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 HS3ST5Q8IZT8 346 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 SCGB1C1Q8TD33 95 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 RAB8BQ92930 207 aa6.21□□□□□ -1.42
LSAMP-207ENST00000539563 ZC3H10Q96K80 434 aaKnown RBP6.21□□□□□ -1.42
LSAMP-207ENST00000539563 C13orf42A0A1B0GVH6 325 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 VSTM2BA6NLU5 285 aa6.2□□□□□ -1.42
LSAMP-207ENST00000539563 TTC34A8MYJ7 566 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms