RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 HYAL2Q12891 473 aa16.21■□□□□ 0.19
PCDHB17P-201ENST00000539533 ZNF621Q6ZSS3 439 aa16.21■□□□□ 0.19
PCDHB17P-201ENST00000539533 NANOGNBQ7Z5D8 188 aa16.21■□□□□ 0.19
PCDHB17P-201ENST00000539533 SLCO6A1Q86UG4 719 aa16.21■□□□□ 0.19
PCDHB17P-201ENST00000539533 OR52E4Q8NGH9 312 aa16.21■□□□□ 0.19
PCDHB17P-201ENST00000539533 OR5K1Q8NHB7 308 aa16.21■□□□□ 0.19
PCDHB17P-201ENST00000539533 RGMAQ96B86 450 aa16.21■□□□□ 0.19
PCDHB17P-201ENST00000539533 SLC22A18Q96BI1 424 aa16.21■□□□□ 0.19
PCDHB17P-201ENST00000539533 CPPED1Q9BRF8 314 aaPredicted RBP16.21■□□□□ 0.19
PCDHB17P-201ENST00000539533 KAT8Q9H7Z6 458 aaKnown RBP16.21■□□□□ 0.19
PCDHB17P-201ENST00000539533 MDC1Q14676 2089 aaKnown RBP16.21■□□□□ 0.18
PCDHB17P-201ENST00000539533 CACNA1IQ9P0X4 2223 aa16.21■□□□□ 0.18
PCDHB17P-201ENST00000539533 GABARAPO95166 117 aa16.2■□□□□ 0.18
PCDHB17P-201ENST00000539533 MAGP20916 626 aa16.2■□□□□ 0.18
PCDHB17P-201ENST00000539533 TRPC1P48995 793 aa16.2■□□□□ 0.18
PCDHB17P-201ENST00000539533 SLC14A1Q13336 389 aa16.2■□□□□ 0.18
PCDHB17P-201ENST00000539533 KIR2DS3Q14952 304 aa16.2■□□□□ 0.18
PCDHB17P-201ENST00000539533 ZIC1Q15915 447 aa16.2■□□□□ 0.18
PCDHB17P-201ENST00000539533 PAQR7Q86WK9 346 aa16.2■□□□□ 0.18
PCDHB17P-201ENST00000539533 TTLQ8NG68 377 aa16.2■□□□□ 0.18
PCDHB17P-201ENST00000539533 ZFPM2Q8WW38 1151 aa16.2■□□□□ 0.18
PCDHB17P-201ENST00000539533 VMP1Q96GC9 406 aa16.2■□□□□ 0.18
PCDHB17P-201ENST00000539533 C17orf62Q9BQA9 187 aa16.2■□□□□ 0.18
PCDHB17P-201ENST00000539533 SARGQ9BW04 601 aa16.2■□□□□ 0.18
PCDHB17P-201ENST00000539533 TWSG1Q9GZX9 223 aa16.2■□□□□ 0.18
PCDHB17P-201ENST00000539533 KLHL25Q9H0H3 589 aa16.2■□□□□ 0.18
PCDHB17P-201ENST00000539533 ACTR10Q9NZ32 417 aa16.2■□□□□ 0.18
PCDHB17P-201ENST00000539533 MAPRE3Q9UPY8 281 aa16.2■□□□□ 0.18
PCDHB17P-201ENST00000539533 AP1M2Q9Y6Q5 423 aa16.2■□□□□ 0.18
PCDHB17P-201ENST00000539533 C4orf51C9J302 202 aa16.2■□□□□ 0.18
PCDHB17P-201ENST00000539533 SLC16A6O15403 523 aa16.2■□□□□ 0.18
PCDHB17P-201ENST00000539533 CAPN5O15484 640 aaPredicted RBP16.2■□□□□ 0.18
PCDHB17P-201ENST00000539533 CCDC159P0C7I6 412 aa16.2■□□□□ 0.18
PCDHB17P-201ENST00000539533 NME1P15531 152 aaKnown RBP16.2■□□□□ 0.18
PCDHB17P-201ENST00000539533 RYKP34925 604 aa16.2■□□□□ 0.18
PCDHB17P-201ENST00000539533 CSNK1EP49674 416 aaKnown RBP16.2■□□□□ 0.18
PCDHB17P-201ENST00000539533 MAPK12P53778 367 aa16.2■□□□□ 0.18
PCDHB17P-201ENST00000539533 EMX1Q04741 257 aaPredicted RBP16.2■□□□□ 0.18
PCDHB17P-201ENST00000539533 KCNJ8Q15842 424 aa16.2■□□□□ 0.18
PCDHB17P-201ENST00000539533 MPEG1Q2M385 716 aa16.2■□□□□ 0.18
PCDHB17P-201ENST00000539533 THOC7Q6I9Y2 204 aaKnown RBP16.2■□□□□ 0.18
PCDHB17P-201ENST00000539533 FAM180BQ6P0A1 224 aa16.2■□□□□ 0.18
PCDHB17P-201ENST00000539533 IQCHQ86VS3 1027 aa16.2■□□□□ 0.18
PCDHB17P-201ENST00000539533 ZCCHC7Q8N3Z6 543 aaKnown RBP16.2■□□□□ 0.18
PCDHB17P-201ENST00000539533 ARL10Q8N8L6 244 aa16.2■□□□□ 0.18
PCDHB17P-201ENST00000539533 PIK3C3Q8NEB9 887 aa16.2■□□□□ 0.18
PCDHB17P-201ENST00000539533 ZFP90Q8TF47 636 aa16.2■□□□□ 0.18
PCDHB17P-201ENST00000539533 FAR1Q8WVX9 515 aa16.2■□□□□ 0.18
PCDHB17P-201ENST00000539533 CIDECQ96AQ7 238 aaPredicted RBP16.2■□□□□ 0.18
PCDHB17P-201ENST00000539533 TEFMQ96QE5 360 aaKnown RBP16.2■□□□□ 0.18
PCDHB17P-201ENST00000539533 SH3GL1Q99961 368 aa16.2■□□□□ 0.18
PCDHB17P-201ENST00000539533 TMEFF2Q9UIK5 374 aaPredicted RBP16.2■□□□□ 0.18
PCDHB17P-201ENST00000539533 BCKDKO14874 412 aa16.19■□□□□ 0.18
PCDHB17P-201ENST00000539533 XPNPEP2O43895 674 aa16.19■□□□□ 0.18
PCDHB17P-201ENST00000539533 TMPRSS11DO60235 418 aa16.19■□□□□ 0.18
PCDHB17P-201ENST00000539533 MAN1A2O60476 641 aa16.19■□□□□ 0.18
PCDHB17P-201ENST00000539533 S100A1P23297 94 aa16.19■□□□□ 0.18
PCDHB17P-201ENST00000539533 AHRP35869 848 aa16.19■□□□□ 0.18
PCDHB17P-201ENST00000539533 HHEXQ03014 270 aa16.19■□□□□ 0.18
PCDHB17P-201ENST00000539533 CDK5R2Q13319 367 aa16.19■□□□□ 0.18
PCDHB17P-201ENST00000539533 IL18R1Q13478 541 aa16.19■□□□□ 0.18
PCDHB17P-201ENST00000539533 PDE7AQ13946 482 aa16.19■□□□□ 0.18
PCDHB17P-201ENST00000539533 PAGE2Q7Z2X7 111 aa16.19■□□□□ 0.18
PCDHB17P-201ENST00000539533 ZNF551Q7Z340 670 aaPredicted RBP16.19■□□□□ 0.18
PCDHB17P-201ENST00000539533 MICU2Q8IYU8 434 aa16.19■□□□□ 0.18
PCDHB17P-201ENST00000539533 CNIH3Q8TBE1 160 aa16.19■□□□□ 0.18
PCDHB17P-201ENST00000539533 LMX1AQ8TE12 382 aa16.19■□□□□ 0.18
PCDHB17P-201ENST00000539533 S100ZQ8WXG8 99 aa16.19■□□□□ 0.18
PCDHB17P-201ENST00000539533 NCLNQ969V3 563 aa16.19■□□□□ 0.18
PCDHB17P-201ENST00000539533 ZNF566Q969W8 418 aa16.19■□□□□ 0.18
PCDHB17P-201ENST00000539533 PPCDCQ96CD2 204 aa16.19■□□□□ 0.18
PCDHB17P-201ENST00000539533 TM4SF18Q96CE8 201 aa16.19■□□□□ 0.18
PCDHB17P-201ENST00000539533 ABCG4Q9H172 646 aa16.19■□□□□ 0.18
PCDHB17P-201ENST00000539533 DCAF13Q9NV06 445 aaKnown RBP16.19■□□□□ 0.18
PCDHB17P-201ENST00000539533 HRASLS2Q9NWW9 162 aa16.19■□□□□ 0.18
PCDHB17P-201ENST00000539533 PCDHGB1Q9Y5G3 927 aa16.19■□□□□ 0.18
PCDHB17P-201ENST00000539533 SPAG17Q6Q759 2223 aa16.19■□□□□ 0.18
PCDHB17P-201ENST00000539533 ZW10O43264 779 aa16.19■□□□□ 0.18
PCDHB17P-201ENST00000539533 JRKO75564 520 aa16.19■□□□□ 0.18
PCDHB17P-201ENST00000539533 RETP07949 1114 aa16.19■□□□□ 0.18
PCDHB17P-201ENST00000539533 TJAP1Q5JTD0 557 aa16.19■□□□□ 0.18
PCDHB17P-201ENST00000539533 C6orf183Q5T699 404 aa16.19■□□□□ 0.18
PCDHB17P-201ENST00000539533 OR4C11Q6IEV9 310 aa16.19■□□□□ 0.18
PCDHB17P-201ENST00000539533 FBXO42Q6P3S6 717 aa16.19■□□□□ 0.18
PCDHB17P-201ENST00000539533 SLC36A4Q6YBV0 504 aa16.19■□□□□ 0.18
PCDHB17P-201ENST00000539533 ZNF793Q6ZN11 406 aa16.19■□□□□ 0.18
PCDHB17P-201ENST00000539533 LINC00299Q6ZSB3 139 aa16.19■□□□□ 0.18
PCDHB17P-201ENST00000539533 NUDT13Q86X67 352 aa16.19■□□□□ 0.18
PCDHB17P-201ENST00000539533 MFSD9Q8NBP5 474 aa16.19■□□□□ 0.18
PCDHB17P-201ENST00000539533 VPS37AQ8NEZ2 397 aa16.19■□□□□ 0.18
PCDHB17P-201ENST00000539533 FBLIM1Q8WUP2 373 aa16.19■□□□□ 0.18
PCDHB17P-201ENST00000539533 MS4A6EQ96DS6 147 aa16.19■□□□□ 0.18
PCDHB17P-201ENST00000539533 BCL7BQ9BQE9 202 aa16.19■□□□□ 0.18
PCDHB17P-201ENST00000539533 PSD2Q9BQI7 771 aa16.19■□□□□ 0.18
PCDHB17P-201ENST00000539533 BHLHE41Q9C0J9 482 aaPredicted RBP16.19■□□□□ 0.18
PCDHB17P-201ENST00000539533 MAGIXQ9H6Y5 334 aa16.19■□□□□ 0.18
PCDHB17P-201ENST00000539533 BTNL2Q9UIR0 455 aa16.19■□□□□ 0.18
PCDHB17P-201ENST00000539533 ORC6Q9Y5N6 252 aa16.19■□□□□ 0.18
PCDHB17P-201ENST00000539533 U3KQV3 271 aa16.19■□□□□ 0.18
PCDHB17P-201ENST00000539533 CLIC1O00299 241 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms