RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 SEMA4BQ9NPR2 832 aaPredicted RBP13.88□□□□□ -0.19
RAB40B-202ENST00000538809 LYARQ9NX58 379 aaKnown RBP13.88□□□□□ -0.19
RAB40B-202ENST00000538809 MS4A12Q9NXJ0 267 aa13.88□□□□□ -0.19
RAB40B-202ENST00000538809 PSMC3IPQ9P2W1 217 aaPredicted RBP13.88□□□□□ -0.19
RAB40B-202ENST00000538809 COPS7AQ9UBW8 275 aa13.88□□□□□ -0.19
RAB40B-202ENST00000538809 ZNF225Q9UK10 706 aa13.88□□□□□ -0.19
RAB40B-202ENST00000538809 IQANK1A0A1B0GTG1 560 aa13.87□□□□□ -0.19
RAB40B-202ENST00000538809 PINLYPA6NC86 204 aa13.87□□□□□ -0.19
RAB40B-202ENST00000538809 WASHC1A8K0Z3 465 aa13.87□□□□□ -0.19
RAB40B-202ENST00000538809 PPP6CO00743 305 aa13.87□□□□□ -0.19
RAB40B-202ENST00000538809 SEMA3DO95025 777 aa13.87□□□□□ -0.19
RAB40B-202ENST00000538809 NR2F6P10588 404 aa13.87□□□□□ -0.19
RAB40B-202ENST00000538809 TSPAN8P19075 237 aa13.87□□□□□ -0.19
RAB40B-202ENST00000538809 BUD31P41223 144 aaPredicted RBP13.87□□□□□ -0.19
RAB40B-202ENST00000538809 PLIN5Q00G26 463 aa13.87□□□□□ -0.19
RAB40B-202ENST00000538809 ZNF750Q32MQ0 723 aa13.87□□□□□ -0.19
RAB40B-202ENST00000538809 TTC19Q6DKK2 380 aaPredicted RBP13.87□□□□□ -0.19
RAB40B-202ENST00000538809 MTFR2Q6P444 385 aa13.87□□□□□ -0.19
RAB40B-202ENST00000538809 CYP20A1Q6UW02 462 aa13.87□□□□□ -0.19
RAB40B-202ENST00000538809 SH2D5Q6ZV89 423 aa13.87□□□□□ -0.19
RAB40B-202ENST00000538809 NUDT13Q86X67 352 aa13.87□□□□□ -0.19
RAB40B-202ENST00000538809 C9orf40Q8IXQ3 194 aa13.87□□□□□ -0.19
RAB40B-202ENST00000538809 ZNF808Q8N4W9 903 aaPredicted RBP13.87□□□□□ -0.19
RAB40B-202ENST00000538809 POGLUT1Q8NBL1 392 aa13.87□□□□□ -0.19
RAB40B-202ENST00000538809 OR4F6Q8NGB9 312 aa13.87□□□□□ -0.19
RAB40B-202ENST00000538809 ACMSDQ8TDX5 336 aa13.87□□□□□ -0.19
RAB40B-202ENST00000538809 UCN3Q969E3 161 aa13.87□□□□□ -0.19
RAB40B-202ENST00000538809 CNPPD1Q9BV87 410 aa13.87□□□□□ -0.19
RAB40B-202ENST00000538809 ASB4Q9Y574 426 aa13.87□□□□□ -0.19
RAB40B-202ENST00000538809 HCFC1P51610 2035 aa13.86□□□□□ -0.19
RAB40B-202ENST00000538809 A0A1W2PR48 441 aa13.86□□□□□ -0.19
RAB40B-202ENST00000538809 A0A1W2PS29 197 aa13.86□□□□□ -0.19
RAB40B-202ENST00000538809 FAM166BA8MTA8 275 aa13.86□□□□□ -0.19
RAB40B-202ENST00000538809 PROM1O43490 865 aa13.86□□□□□ -0.19
RAB40B-202ENST00000538809 DLX3O60479 287 aa13.86□□□□□ -0.19
RAB40B-202ENST00000538809 AIFM1O95831 613 aa13.86□□□□□ -0.19
RAB40B-202ENST00000538809 FAM58BPP0C7Q3 252 aa13.86□□□□□ -0.19
RAB40B-202ENST00000538809 ALOX15P16050 662 aaPredicted RBP13.86□□□□□ -0.19
RAB40B-202ENST00000538809 TLX1P31314 330 aaPredicted RBP13.86□□□□□ -0.19
RAB40B-202ENST00000538809 NR0B1P51843 470 aaKnown RBP13.86□□□□□ -0.19
RAB40B-202ENST00000538809 HERVK_113P63132 956 aa13.86□□□□□ -0.19
RAB40B-202ENST00000538809 ERVK-8P63133 956 aa13.86□□□□□ -0.19
RAB40B-202ENST00000538809 CMPK2Q5EBM0 449 aa13.86□□□□□ -0.19
RAB40B-202ENST00000538809 SGO1Q5FBB7 561 aa13.86□□□□□ -0.19
RAB40B-202ENST00000538809 TEX35Q5T0J7 233 aa13.86□□□□□ -0.19
RAB40B-202ENST00000538809 C10orf62Q5T681 223 aaPredicted RBP13.86□□□□□ -0.19
RAB40B-202ENST00000538809 FRG2Q64ET8 278 aa13.86□□□□□ -0.19
RAB40B-202ENST00000538809 LETMD1Q6P1Q0 360 aa13.86□□□□□ -0.19
RAB40B-202ENST00000538809 RPTNQ6XPR3 784 aa13.86□□□□□ -0.19
RAB40B-202ENST00000538809 GPALPP1Q8IXQ4 340 aa13.86□□□□□ -0.19
RAB40B-202ENST00000538809 ZFP62Q8NB50 900 aaPredicted RBP13.86□□□□□ -0.19
RAB40B-202ENST00000538809 MYRIPQ8NFW9 859 aa13.86□□□□□ -0.19
RAB40B-202ENST00000538809 OR2M7Q8NG81 312 aa13.86□□□□□ -0.19
RAB40B-202ENST00000538809 OR52N2Q8NGI0 321 aa13.86□□□□□ -0.19
RAB40B-202ENST00000538809 OR8K3Q8NH51 312 aa13.86□□□□□ -0.19
RAB40B-202ENST00000538809 AGAP11Q8TF27 550 aa13.86□□□□□ -0.19
RAB40B-202ENST00000538809 TANKQ92844 425 aa13.86□□□□□ -0.19
RAB40B-202ENST00000538809 SENP5Q96HI0 755 aaPredicted RBP13.86□□□□□ -0.19
RAB40B-202ENST00000538809 FRG2BQ96QU4 278 aa13.86□□□□□ -0.19
RAB40B-202ENST00000538809 SERPINI1Q99574 410 aa13.86□□□□□ -0.19
RAB40B-202ENST00000538809 ERVK-6Q9BXR3 956 aa13.86□□□□□ -0.19
RAB40B-202ENST00000538809 MRPL1Q9BYD6 325 aaKnown RBP13.86□□□□□ -0.19
RAB40B-202ENST00000538809 TEX10Q9NXF1 929 aaPredicted RBP13.86□□□□□ -0.19
RAB40B-202ENST00000538809 ERVK-19Q9WJR5 959 aa13.86□□□□□ -0.19
RAB40B-202ENST00000538809 MEMO1Q9Y316 297 aa13.86□□□□□ -0.19
RAB40B-202ENST00000538809 A0A1B0GTH9 108 aa13.85□□□□□ -0.19
RAB40B-202ENST00000538809 OR10H2O60403 315 aa13.85□□□□□ -0.19
RAB40B-202ENST00000538809 PDE9AO76083 593 aa13.85□□□□□ -0.19
RAB40B-202ENST00000538809 SHBGP04278 402 aa13.85□□□□□ -0.19
RAB40B-202ENST00000538809 IGKV3-11P04433 115 aa13.85□□□□□ -0.19
RAB40B-202ENST00000538809 TPOP07202 933 aa13.85□□□□□ -0.19
RAB40B-202ENST00000538809 GSTA1P08263 222 aa13.85□□□□□ -0.19
RAB40B-202ENST00000538809 HSD17B3P37058 310 aa13.85□□□□□ -0.19
RAB40B-202ENST00000538809 CDH13P55290 713 aa13.85□□□□□ -0.19
RAB40B-202ENST00000538809 PLGLB1Q02325 96 aa13.85□□□□□ -0.19
RAB40B-202ENST00000538809 ASPHQ12797 758 aa13.85□□□□□ -0.19
RAB40B-202ENST00000538809 IFT88Q13099 833 aa13.85□□□□□ -0.19
RAB40B-202ENST00000538809 UNC50Q53HI1 259 aa13.85□□□□□ -0.19
RAB40B-202ENST00000538809 ZNF678Q5SXM1 525 aa13.85□□□□□ -0.19
RAB40B-202ENST00000538809 RTL4Q6ZR62 310 aa13.85□□□□□ -0.19
RAB40B-202ENST00000538809 MILR1Q7Z6M3 343 aa13.85□□□□□ -0.19
RAB40B-202ENST00000538809 CNPY4Q8N129 248 aa13.85□□□□□ -0.19
RAB40B-202ENST00000538809 OR5L2Q8NGL0 311 aa13.85□□□□□ -0.19
RAB40B-202ENST00000538809 C16orf52Q8NHV5 167 aa13.85□□□□□ -0.19
RAB40B-202ENST00000538809 MARVELD3Q96A59 401 aa13.85□□□□□ -0.19
RAB40B-202ENST00000538809 RBM18Q96H35 190 aaKnown RBP13.85□□□□□ -0.19
RAB40B-202ENST00000538809 TMEM237Q96Q45 408 aa13.85□□□□□ -0.19
RAB40B-202ENST00000538809 PHF12Q96QT6 1004 aa13.85□□□□□ -0.19
RAB40B-202ENST00000538809 GAL3ST4Q96RP7 486 aa13.85□□□□□ -0.19
RAB40B-202ENST00000538809 ANKZF1Q9H8Y5 726 aa13.85□□□□□ -0.19
RAB40B-202ENST00000538809 WDR41Q9HAD4 459 aa13.85□□□□□ -0.19
RAB40B-202ENST00000538809 FARSBQ9NSD9 589 aaKnown RBP13.85□□□□□ -0.19
RAB40B-202ENST00000538809 EMCNQ9ULC0 261 aa13.85□□□□□ -0.19
RAB40B-202ENST00000538809 ENTPD4Q9Y227 616 aa13.85□□□□□ -0.19
RAB40B-202ENST00000538809 A0A1W2PPM1 405 aa13.84□□□□□ -0.19
RAB40B-202ENST00000538809 GOLGA8RI6L899 631 aa13.84□□□□□ -0.19
RAB40B-202ENST00000538809 DYRK3O43781 588 aa13.84□□□□□ -0.19
RAB40B-202ENST00000538809 GPR75O95800 540 aa13.84□□□□□ -0.19
RAB40B-202ENST00000538809 OTCP00480 354 aa13.84□□□□□ -0.19
RAB40B-202ENST00000538809 CCL3P10147 92 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms