RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 ELP5Q8TE02 316 aa12.21□□□□□ -0.45
CHFR-216ENST00000538235 METTL21AQ8WXB1 218 aa12.21□□□□□ -0.45
CHFR-216ENST00000538235 GFM2Q969S9 779 aaKnown RBP12.21□□□□□ -0.45
CHFR-216ENST00000538235 NACC2Q96BF6 587 aa12.21□□□□□ -0.45
CHFR-216ENST00000538235 THOC3Q96J01 351 aaKnown RBP12.21□□□□□ -0.45
CHFR-216ENST00000538235 OR52B2Q96RD2 323 aa12.21□□□□□ -0.45
CHFR-216ENST00000538235 ILKAPQ9H0C8 392 aaPredicted RBP12.21□□□□□ -0.45
CHFR-216ENST00000538235 AKTIPQ9H8T0 292 aa12.21□□□□□ -0.45
CHFR-216ENST00000538235 ANKRA2Q9H9E1 313 aa12.21□□□□□ -0.45
CHFR-216ENST00000538235 MEAF6Q9HAF1 191 aa12.21□□□□□ -0.45
CHFR-216ENST00000538235 ADAP2Q9NPF8 381 aa12.21□□□□□ -0.45
CHFR-216ENST00000538235 ZNF71Q9NQZ8 489 aaPredicted RBP12.21□□□□□ -0.45
CHFR-216ENST00000538235 INTS9Q9NV88 658 aaKnown RBP12.21□□□□□ -0.45
CHFR-216ENST00000538235 RIC8BQ9NVN3 520 aa12.21□□□□□ -0.45
CHFR-216ENST00000538235 GPR83Q9NYM4 423 aa12.21□□□□□ -0.45
CHFR-216ENST00000538235 AHSPQ9NZD4 102 aa12.21□□□□□ -0.45
CHFR-216ENST00000538235 VTI1BQ9UEU0 232 aa12.21□□□□□ -0.45
CHFR-216ENST00000538235 PPIEQ9UNP9 301 aaKnown RBP12.21□□□□□ -0.45
CHFR-216ENST00000538235 SHANK1Q9Y566 2161 aa12.2□□□□□ -0.46
CHFR-216ENST00000538235 GOLGA8QA0A0J9YX86 632 aa12.2□□□□□ -0.46
CHFR-216ENST00000538235 GNG14A0A1W2PPG7 69 aa12.2□□□□□ -0.46
CHFR-216ENST00000538235 GOLGA8OA6NCC3 632 aa12.2□□□□□ -0.46
CHFR-216ENST00000538235 GOLGA8NF8WBI6 632 aa12.2□□□□□ -0.46
CHFR-216ENST00000538235 ANKRD28O15084 1053 aa12.2□□□□□ -0.46
CHFR-216ENST00000538235 RGS14O43566 566 aa12.2□□□□□ -0.46
CHFR-216ENST00000538235 LRATO95237 230 aa12.2□□□□□ -0.46
CHFR-216ENST00000538235 GPR75O95800 540 aa12.2□□□□□ -0.46
CHFR-216ENST00000538235 IGKV3-11P04433 115 aa12.2□□□□□ -0.46
CHFR-216ENST00000538235 SERPINA7P05543 415 aa12.2□□□□□ -0.46
CHFR-216ENST00000538235 CD1EP15812 388 aa12.2□□□□□ -0.46
CHFR-216ENST00000538235 EFNA1P20827 205 aaPredicted RBP12.2□□□□□ -0.46
CHFR-216ENST00000538235 ITGA3P26006 1051 aa12.2□□□□□ -0.46
CHFR-216ENST00000538235 FEN1P39748 380 aaKnown RBP12.2□□□□□ -0.46
CHFR-216ENST00000538235 BUD31P41223 144 aaPredicted RBP12.2□□□□□ -0.46
CHFR-216ENST00000538235 STT3AP46977 705 aa12.2□□□□□ -0.46
CHFR-216ENST00000538235 ALDH9A1P49189 494 aa12.2□□□□□ -0.46
CHFR-216ENST00000538235 TRA2BP62995 288 aaKnown RBP12.2□□□□□ -0.46
CHFR-216ENST00000538235 AIMP2Q13155 320 aaKnown RBP12.2□□□□□ -0.46
CHFR-216ENST00000538235 PDE7AQ13946 482 aa12.2□□□□□ -0.46
CHFR-216ENST00000538235 MYBPC3Q14896 1274 aa12.2□□□□□ -0.46
CHFR-216ENST00000538235 BTBD16Q32M84 506 aa12.2□□□□□ -0.46
CHFR-216ENST00000538235 TMEM198Q66K66 360 aa12.2□□□□□ -0.46
CHFR-216ENST00000538235 FAM111BQ6SJ93 734 aa12.2□□□□□ -0.46
CHFR-216ENST00000538235 LARP4Q71RC2 724 aaKnown RBP eCLIP12.2□□□□□ -0.46
CHFR-216ENST00000538235 LIX1Q8N485 282 aa12.2□□□□□ -0.46
CHFR-216ENST00000538235 KRTCAP2Q8N6L1 136 aa12.2□□□□□ -0.46
CHFR-216ENST00000538235 GOLGA6L1Q8N7Z2 621 aa12.2□□□□□ -0.46
CHFR-216ENST00000538235 ZNF721Q8TF20 911 aa12.2□□□□□ -0.46
CHFR-216ENST00000538235 NCLNQ969V3 563 aa12.2□□□□□ -0.46
CHFR-216ENST00000538235 EXOSC8Q96B26 276 aaKnown RBP12.2□□□□□ -0.46
CHFR-216ENST00000538235 MAELQ96JY0 434 aaKnown RBP12.2□□□□□ -0.46
CHFR-216ENST00000538235 MARK4Q96L34 752 aa12.2□□□□□ -0.46
CHFR-216ENST00000538235 C7orf26Q96N11 449 aa12.2□□□□□ -0.46
CHFR-216ENST00000538235 IP6K3Q96PC2 410 aa12.2□□□□□ -0.46
CHFR-216ENST00000538235 CCT7Q99832 543 aa12.2□□□□□ -0.46
CHFR-216ENST00000538235 EBF4Q9BQW3 602 aa12.2□□□□□ -0.46
CHFR-216ENST00000538235 TUBB6Q9BUF5 446 aa12.2□□□□□ -0.46
CHFR-216ENST00000538235 LIN28AQ9H9Z2 209 aaKnown RBP12.2□□□□□ -0.46
CHFR-216ENST00000538235 MS4A12Q9NXJ0 267 aa12.2□□□□□ -0.46
CHFR-216ENST00000538235 MRPS33Q9Y291 106 aaKnown RBP12.2□□□□□ -0.46
CHFR-216ENST00000538235 DTX4Q9Y2E6 619 aa12.2□□□□□ -0.46
CHFR-216ENST00000538235 C1orf226A1L170 272 aa12.19□□□□□ -0.46
CHFR-216ENST00000538235 C17orf105B2RV13 164 aa12.19□□□□□ -0.46
CHFR-216ENST00000538235 C9JVG2 144 aa12.19□□□□□ -0.46
CHFR-216ENST00000538235 AKAP10O43572 662 aa12.19□□□□□ -0.46
CHFR-216ENST00000538235 F10P00742 488 aa12.19□□□□□ -0.46
CHFR-216ENST00000538235 CPMP14384 443 aa12.19□□□□□ -0.46
CHFR-216ENST00000538235 ALOX15P16050 662 aaPredicted RBP12.19□□□□□ -0.46
CHFR-216ENST00000538235 S1PR1P21453 382 aa12.19□□□□□ -0.46
CHFR-216ENST00000538235 EPHA3P29320 983 aa12.19□□□□□ -0.46
CHFR-216ENST00000538235 SSTR4P31391 388 aa12.19□□□□□ -0.46
CHFR-216ENST00000538235 GUCY1A3Q02108 690 aa12.19□□□□□ -0.46
CHFR-216ENST00000538235 ELAVL1Q15717 326 aaKnown RBP12.19□□□□□ -0.46
CHFR-216ENST00000538235 CEBPEQ15744 281 aa12.19□□□□□ -0.46
CHFR-216ENST00000538235 ZNF468Q5VIY5 522 aaPredicted RBP12.19□□□□□ -0.46
CHFR-216ENST00000538235 RGS9BPQ6ZS82 235 aa12.19□□□□□ -0.46
CHFR-216ENST00000538235 TICAM1Q8IUC6 712 aa12.19□□□□□ -0.46
CHFR-216ENST00000538235 CRLF3Q8IUI8 442 aa12.19□□□□□ -0.46
CHFR-216ENST00000538235 C9orf40Q8IXQ3 194 aa12.19□□□□□ -0.46
CHFR-216ENST00000538235 RBMXL3Q8N7X1 1067 aaKnown RBP12.19□□□□□ -0.46
CHFR-216ENST00000538235 ADCY4Q8NFM4 1077 aa12.19□□□□□ -0.46
CHFR-216ENST00000538235 SLC2A12Q8TD20 617 aa12.19□□□□□ -0.46
CHFR-216ENST00000538235 TANKQ92844 425 aa12.19□□□□□ -0.46
CHFR-216ENST00000538235 CIDECQ96AQ7 238 aaPredicted RBP12.19□□□□□ -0.46
CHFR-216ENST00000538235 KLHL29Q96CT2 875 aa12.19□□□□□ -0.46
CHFR-216ENST00000538235 TUBGCP3Q96CW5 907 aa12.19□□□□□ -0.46
CHFR-216ENST00000538235 THOC1Q96FV9 657 aaKnown RBP12.19□□□□□ -0.46
CHFR-216ENST00000538235 TEX37Q96LM6 180 aa12.19□□□□□ -0.46
CHFR-216ENST00000538235 FER1L6-AS2Q96M78 137 aa12.19□□□□□ -0.46
CHFR-216ENST00000538235 UBL7Q96S82 380 aaPredicted RBP12.19□□□□□ -0.46
CHFR-216ENST00000538235 LPAR4Q99677 370 aa12.19□□□□□ -0.46
CHFR-216ENST00000538235 SMAD5Q99717 465 aaKnown RBP12.19□□□□□ -0.46
CHFR-216ENST00000538235 MMP25Q9NPA2 562 aa12.19□□□□□ -0.46
CHFR-216ENST00000538235 ATP13A2Q9NQ11 1180 aa12.19□□□□□ -0.46
CHFR-216ENST00000538235 MAT2BQ9NZL9 334 aa12.19□□□□□ -0.46
CHFR-216ENST00000538235 PTGFRNQ9P2B2 879 aa12.19□□□□□ -0.46
CHFR-216ENST00000538235 C19orf25Q9UFG5 118 aaPredicted RBP12.19□□□□□ -0.46
CHFR-216ENST00000538235 PCDHGA9Q9Y5G4 932 aaKnown RBP12.19□□□□□ -0.46
CHFR-216ENST00000538235 TRBV11-1A0A0K0K1C0 115 aa12.18□□□□□ -0.46
CHFR-216ENST00000538235 CLDN4O14493 209 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms