RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 LRRC37BQ96QE4 947 aa22.74■■□□□ 1.23
HMGA2-208ENST00000537429 DUSP26Q9BV47 211 aa22.74■■□□□ 1.23
HMGA2-208ENST00000537429 CCDC106Q9BWC9 280 aa22.74■■□□□ 1.23
HMGA2-208ENST00000537429 BHLHE41Q9C0J9 482 aaPredicted RBP22.74■■□□□ 1.23
HMGA2-208ENST00000537429 ZNF780BQ9Y6R6 833 aa22.74■■□□□ 1.23
HMGA2-208ENST00000537429 NCOR2Q9Y618 2525 aa22.73■■□□□ 1.23
HMGA2-208ENST00000537429 TLX3O43711 291 aaPredicted RBP22.73■■□□□ 1.23
HMGA2-208ENST00000537429 C8orf89P0DMQ9 161 aa22.73■■□□□ 1.23
HMGA2-208ENST00000537429 FOLR3P41439 243 aa22.73■■□□□ 1.23
HMGA2-208ENST00000537429 FRKP42685 505 aaPredicted RBP22.73■■□□□ 1.23
HMGA2-208ENST00000537429 KIR3DL1P43629 444 aa22.73■■□□□ 1.23
HMGA2-208ENST00000537429 PHC1P78364 1004 aa22.73■■□□□ 1.23
HMGA2-208ENST00000537429 CLN3Q13286 438 aa22.73■■□□□ 1.23
HMGA2-208ENST00000537429 BIKQ13323 160 aa22.73■■□□□ 1.23
HMGA2-208ENST00000537429 SERTAD2Q14140 314 aa22.73■■□□□ 1.23
HMGA2-208ENST00000537429 NSDHLQ15738 373 aa22.73■■□□□ 1.23
HMGA2-208ENST00000537429 ZNF750Q32MQ0 723 aa22.73■■□□□ 1.23
HMGA2-208ENST00000537429 SAMD14Q8IZD0 417 aaPredicted RBP22.73■■□□□ 1.23
HMGA2-208ENST00000537429 NATD1Q8N6N6 113 aa22.73■■□□□ 1.23
HMGA2-208ENST00000537429 ZNF248Q8NDW4 579 aa22.73■■□□□ 1.23
HMGA2-208ENST00000537429 C7orf57Q8NEG2 295 aa22.73■■□□□ 1.23
HMGA2-208ENST00000537429 TMEM121BQ9BXQ6 578 aaPredicted RBP22.73■■□□□ 1.23
HMGA2-208ENST00000537429 ALOXE3Q9BYJ1 711 aa22.73■■□□□ 1.23
HMGA2-208ENST00000537429 SEMA3GQ9NS98 782 aa22.73■■□□□ 1.23
HMGA2-208ENST00000537429 CEP295Q9C0D2 2601 aa22.72■■□□□ 1.23
HMGA2-208ENST00000537429 TCRBV16S1A1N1A0A5B0 115 aa22.72■■□□□ 1.23
HMGA2-208ENST00000537429 MYO1GB0I1T2 1018 aa22.72■■□□□ 1.23
HMGA2-208ENST00000537429 ALOX12BO75342 701 aa22.72■■□□□ 1.23
HMGA2-208ENST00000537429 IL6P05231 212 aa22.72■■□□□ 1.23
HMGA2-208ENST00000537429 PGRP06401 933 aa22.72■■□□□ 1.23
HMGA2-208ENST00000537429 S100A3P33764 101 aa22.72■■□□□ 1.23
HMGA2-208ENST00000537429 FEN1P39748 380 aaKnown RBP22.72■■□□□ 1.23
HMGA2-208ENST00000537429 DGKQP52824 942 aa22.72■■□□□ 1.23
HMGA2-208ENST00000537429 WNT3P56703 355 aa22.72■■□□□ 1.23
HMGA2-208ENST00000537429 DUSP2Q05923 314 aa22.72■■□□□ 1.23
HMGA2-208ENST00000537429 OR4F3Q6IEY1 312 aa22.72■■□□□ 1.23
HMGA2-208ENST00000537429 VASH2Q86V25 355 aa22.72■■□□□ 1.23
HMGA2-208ENST00000537429 SNIP1Q8TAD8 396 aaKnown RBP22.72■■□□□ 1.23
HMGA2-208ENST00000537429 KCNE4Q8WWG9 221 aa22.72■■□□□ 1.23
HMGA2-208ENST00000537429 CIDECQ96AQ7 238 aaPredicted RBP22.72■■□□□ 1.23
HMGA2-208ENST00000537429 SLC52A3Q9NQ40 469 aa22.72■■□□□ 1.23
HMGA2-208ENST00000537429 GIMAP4Q9NUV9 329 aa22.72■■□□□ 1.23
HMGA2-208ENST00000537429 IL17BQ9UHF5 180 aa22.72■■□□□ 1.23
HMGA2-208ENST00000537429 ENTPD4Q9Y227 616 aa22.72■■□□□ 1.23
HMGA2-208ENST00000537429 CAPN7Q9Y6W3 813 aa22.72■■□□□ 1.23
HMGA2-208ENST00000537429 MYOCOSA0A1B0GUC4 107 aa22.72■■□□□ 1.23
HMGA2-208ENST00000537429 SYNDIG1LA6NDD5 238 aa22.72■■□□□ 1.23
HMGA2-208ENST00000537429 PDPK1O15530 556 aa22.72■■□□□ 1.23
HMGA2-208ENST00000537429 SCN2BO60939 215 aa22.72■■□□□ 1.23
HMGA2-208ENST00000537429 CPMP14384 443 aa22.72■■□□□ 1.23
HMGA2-208ENST00000537429 PORP16435 677 aaPredicted RBP22.72■■□□□ 1.23
HMGA2-208ENST00000537429 CSNK2A2P19784 350 aaPredicted RBP22.72■■□□□ 1.23
HMGA2-208ENST00000537429 CPZQ66K79 652 aa22.72■■□□□ 1.23
HMGA2-208ENST00000537429 TMEM205Q6UW68 189 aa22.72■■□□□ 1.23
HMGA2-208ENST00000537429 SUN3Q8TAQ9 357 aa22.72■■□□□ 1.23
HMGA2-208ENST00000537429 SLAMF7Q9NQ25 335 aa22.72■■□□□ 1.23
HMGA2-208ENST00000537429 CAPNS1P04632 268 aa22.71■■□□□ 1.23
HMGA2-208ENST00000537429 SLC35E2P0CK97 266 aa22.71■■□□□ 1.23
HMGA2-208ENST00000537429 LIFP15018 202 aa22.71■■□□□ 1.23
HMGA2-208ENST00000537429 KCNK10P57789 538 aa22.71■■□□□ 1.23
HMGA2-208ENST00000537429 SSPNQ14714 243 aa22.71■■□□□ 1.23
HMGA2-208ENST00000537429 FAAH2Q6GMR7 532 aa22.71■■□□□ 1.23
HMGA2-208ENST00000537429 GK5Q6ZS86 529 aa22.71■■□□□ 1.23
HMGA2-208ENST00000537429 LANCL3Q6ZV70 420 aa22.71■■□□□ 1.23
HMGA2-208ENST00000537429 CCDC116Q8IYX3 515 aa22.71■■□□□ 1.23
HMGA2-208ENST00000537429 ST13P4Q8IZP2 240 aaPredicted RBP22.71■■□□□ 1.23
HMGA2-208ENST00000537429 LRRC25Q8N386 305 aaPredicted RBP22.71■■□□□ 1.23
HMGA2-208ENST00000537429 FITM2Q8N6M3 262 aa22.71■■□□□ 1.23
HMGA2-208ENST00000537429 TSPEARQ8WU66 669 aa22.71■■□□□ 1.23
HMGA2-208ENST00000537429 METTL21AQ8WXB1 218 aa22.71■■□□□ 1.23
HMGA2-208ENST00000537429 SPDL1Q96EA4 605 aa22.71■■□□□ 1.23
HMGA2-208ENST00000537429 BBS4Q96RK4 519 aa22.71■■□□□ 1.23
HMGA2-208ENST00000537429 EFHD1Q9BUP0 239 aa22.71■■□□□ 1.23
HMGA2-208ENST00000537429 ACSS1Q9NUB1 689 aaPredicted RBP22.71■■□□□ 1.23
HMGA2-208ENST00000537429 MRPS18BQ9Y676 258 aaKnown RBP22.71■■□□□ 1.23
HMGA2-208ENST00000537429 NR5A2O00482 541 aa22.7■■□□□ 1.22
HMGA2-208ENST00000537429 IGHEP01854 428 aa22.7■■□□□ 1.22
HMGA2-208ENST00000537429 MMP11P24347 488 aa22.7■■□□□ 1.22
HMGA2-208ENST00000537429 MPIP34949 423 aa22.7■■□□□ 1.22
HMGA2-208ENST00000537429 STT3AP46977 705 aa22.7■■□□□ 1.22
HMGA2-208ENST00000537429 ANKRD37Q7Z713 158 aa22.7■■□□□ 1.22
HMGA2-208ENST00000537429 TREML1Q86YW5 311 aa22.7■■□□□ 1.22
HMGA2-208ENST00000537429 VPS33AQ96AX1 596 aa22.7■■□□□ 1.22
HMGA2-208ENST00000537429 ERP27Q96DN0 273 aa22.7■■□□□ 1.22
HMGA2-208ENST00000537429 ZBED6CLQ96FA7 236 aaPredicted RBP22.7■■□□□ 1.22
HMGA2-208ENST00000537429 OR52E6Q96RD3 313 aa22.7■■□□□ 1.22
HMGA2-208ENST00000537429 GLIPR2Q9H4G4 154 aa22.7■■□□□ 1.22
HMGA2-208ENST00000537429 FAM120CQ9NX05 1096 aaKnown RBP22.7■■□□□ 1.22
HMGA2-208ENST00000537429 CELSR3Q9NYQ7 3312 aa22.69■■□□□ 1.22
HMGA2-208ENST00000537429 DYTNA2CJ06 578 aa22.69■■□□□ 1.22
HMGA2-208ENST00000537429 CCDC154A6NI56 674 aa22.69■■□□□ 1.22
HMGA2-208ENST00000537429 CAPN14A8MX76 684 aa22.69■■□□□ 1.22
HMGA2-208ENST00000537429 RNASET2O00584 256 aaKnown RBP22.69■■□□□ 1.22
HMGA2-208ENST00000537429 PCDH17O14917 1159 aa22.69■■□□□ 1.22
HMGA2-208ENST00000537429 KLK10O43240 276 aa22.69■■□□□ 1.22
HMGA2-208ENST00000537429 ATP1B1P05026 303 aa22.69■■□□□ 1.22
HMGA2-208ENST00000537429 SNRPB2P08579 225 aaKnown RBP22.69■■□□□ 1.22
HMGA2-208ENST00000537429 CAPN3P20807 821 aa22.69■■□□□ 1.22
HMGA2-208ENST00000537429 NTSP30990 170 aa22.69■■□□□ 1.22
HMGA2-208ENST00000537429 MLC1Q15049 377 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms