RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 MAPK12P53778 367 aa12.23□□□□□ -0.45
PRKDC-206ENST00000536429 RAE1P78406 368 aaKnown RBP12.23□□□□□ -0.45
PRKDC-206ENST00000536429 ZNF844Q08AG5 666 aa12.23□□□□□ -0.45
PRKDC-206ENST00000536429 FAM180AQ6UWF9 173 aa12.23□□□□□ -0.45
PRKDC-206ENST00000536429 HSDL2Q6YN16 418 aa12.23□□□□□ -0.45
PRKDC-206ENST00000536429 PAGE2Q7Z2X7 111 aa12.23□□□□□ -0.45
PRKDC-206ENST00000536429 BCORP1Q8N888 145 aa12.23□□□□□ -0.45
PRKDC-206ENST00000536429 SUN3Q8TAQ9 357 aa12.23□□□□□ -0.45
PRKDC-206ENST00000536429 PRR7Q8TB68 274 aa12.23□□□□□ -0.45
PRKDC-206ENST00000536429 RDH11Q8TC12 318 aa12.23□□□□□ -0.45
PRKDC-206ENST00000536429 CHTF18Q8WVB6 975 aa12.23□□□□□ -0.45
PRKDC-206ENST00000536429 TM4SF18Q96CE8 201 aa12.23□□□□□ -0.45
PRKDC-206ENST00000536429 CCDC126Q96EE4 140 aa12.23□□□□□ -0.45
PRKDC-206ENST00000536429 APIPQ96GX9 242 aa12.23□□□□□ -0.45
PRKDC-206ENST00000536429 SENP5Q96HI0 755 aaPredicted RBP12.23□□□□□ -0.45
PRKDC-206ENST00000536429 FAM111AQ96PZ2 611 aa12.23□□□□□ -0.45
PRKDC-206ENST00000536429 SLX1AQ9BQ83 275 aa12.23□□□□□ -0.45
PRKDC-206ENST00000536429 MECRQ9BV79 373 aa12.23□□□□□ -0.45
PRKDC-206ENST00000536429 GATA5Q9BWX5 397 aaPredicted RBP12.23□□□□□ -0.45
PRKDC-206ENST00000536429 ROPN1BQ9BZX4 212 aaPredicted RBP12.23□□□□□ -0.45
PRKDC-206ENST00000536429 TRIM45Q9H8W5 580 aaPredicted RBP12.23□□□□□ -0.45
PRKDC-206ENST00000536429 ROPN1Q9HAT0 212 aaPredicted RBP12.23□□□□□ -0.45
PRKDC-206ENST00000536429 AGPAT4Q9NRZ5 378 aa12.23□□□□□ -0.45
PRKDC-206ENST00000536429 OLAHQ9NV23 265 aa12.23□□□□□ -0.45
PRKDC-206ENST00000536429 AHSPQ9NZD4 102 aa12.23□□□□□ -0.45
PRKDC-206ENST00000536429 VPS29Q9UBQ0 182 aa12.23□□□□□ -0.45
PRKDC-206ENST00000536429 ADAM29Q9UKF5 820 aa12.23□□□□□ -0.45
PRKDC-206ENST00000536429 SVILO95425 2214 aa12.23□□□□□ -0.45
PRKDC-206ENST00000536429 SYNDIG1LA6NDD5 238 aa12.22□□□□□ -0.45
PRKDC-206ENST00000536429 SLC25A12O75746 678 aa12.22□□□□□ -0.45
PRKDC-206ENST00000536429 OR2J2O76002 312 aa12.22□□□□□ -0.45
PRKDC-206ENST00000536429 CLPSP04118 112 aa12.22□□□□□ -0.45
PRKDC-206ENST00000536429 ENO1P06733 434 aaKnown RBP12.22□□□□□ -0.45
PRKDC-206ENST00000536429 SP1P08047 785 aa12.22□□□□□ -0.45
PRKDC-206ENST00000536429 CT62P0C5K7 136 aa12.22□□□□□ -0.45
PRKDC-206ENST00000536429 HSD3B1P14060 373 aa12.22□□□□□ -0.45
PRKDC-206ENST00000536429 HSD3B2P26439 372 aa12.22□□□□□ -0.45
PRKDC-206ENST00000536429 CYB561P49447 251 aa12.22□□□□□ -0.45
PRKDC-206ENST00000536429 HLCSP50747 726 aa12.22□□□□□ -0.45
PRKDC-206ENST00000536429 HK2P52789 917 aa12.22□□□□□ -0.45
PRKDC-206ENST00000536429 RNF4P78317 190 aa12.22□□□□□ -0.45
PRKDC-206ENST00000536429 PLIN5Q00G26 463 aa12.22□□□□□ -0.45
PRKDC-206ENST00000536429 DUSP2Q05923 314 aa12.22□□□□□ -0.45
PRKDC-206ENST00000536429 CSTF3Q12996 717 aaKnown RBP12.22□□□□□ -0.45
PRKDC-206ENST00000536429 UBAP2LQ14157 1087 aaKnown RBP12.22□□□□□ -0.45
PRKDC-206ENST00000536429 INAQ16352 499 aa12.22□□□□□ -0.45
PRKDC-206ENST00000536429 CFAP157Q5JU67 520 aa12.22□□□□□ -0.45
PRKDC-206ENST00000536429 LIPMQ5VYY2 423 aa12.22□□□□□ -0.45
PRKDC-206ENST00000536429 OR52E8Q6IFG1 317 aa12.22□□□□□ -0.45
PRKDC-206ENST00000536429 SLC25A25Q6KCM7 469 aa12.22□□□□□ -0.45
PRKDC-206ENST00000536429 FAM180BQ6P0A1 224 aa12.22□□□□□ -0.45
PRKDC-206ENST00000536429 GALNTL5Q7Z4T8 443 aa12.22□□□□□ -0.45
PRKDC-206ENST00000536429 MDGA2Q7Z553 956 aa12.22□□□□□ -0.45
PRKDC-206ENST00000536429 C9orf40Q8IXQ3 194 aa12.22□□□□□ -0.45
PRKDC-206ENST00000536429 ST13P4Q8IZP2 240 aaPredicted RBP12.22□□□□□ -0.45
PRKDC-206ENST00000536429 ST6GALNAC3Q8NDV1 305 aa12.22□□□□□ -0.45
PRKDC-206ENST00000536429 NR4A3Q92570 626 aa12.22□□□□□ -0.45
PRKDC-206ENST00000536429 RBM18Q96H35 190 aaKnown RBP12.22□□□□□ -0.45
PRKDC-206ENST00000536429 CNPPD1Q9BV87 410 aa12.22□□□□□ -0.45
PRKDC-206ENST00000536429 TMEM109Q9BVC6 243 aa12.22□□□□□ -0.45
PRKDC-206ENST00000536429 MYOTQ9UBF9 498 aa12.22□□□□□ -0.45
PRKDC-206ENST00000536429 CES1P1Q9UKY3 287 aa12.22□□□□□ -0.45
PRKDC-206ENST00000536429 STK38LQ9Y2H1 464 aa12.22□□□□□ -0.45
PRKDC-206ENST00000536429 PCDHA9Q9Y5H5 950 aa12.22□□□□□ -0.45
PRKDC-206ENST00000536429 PTGDR2Q9Y5Y4 395 aa12.22□□□□□ -0.45
PRKDC-206ENST00000536429 HIVEP3Q5T1R4 2406 aa12.22□□□□□ -0.45
PRKDC-206ENST00000536429 DOPEY2Q9Y3R5 2298 aa12.22□□□□□ -0.45
PRKDC-206ENST00000536429 USP9YO00507 2555 aaPredicted RBP12.21□□□□□ -0.45
PRKDC-206ENST00000536429 FCHO1O14526 889 aa12.21□□□□□ -0.45
PRKDC-206ENST00000536429 OR10H2O60403 315 aa12.21□□□□□ -0.45
PRKDC-206ENST00000536429 OR6B1O95007 311 aa12.21□□□□□ -0.45
PRKDC-206ENST00000536429 SLC35E2P0CK97 266 aa12.21□□□□□ -0.45
PRKDC-206ENST00000536429 COX7A2P14406 83 aa12.21□□□□□ -0.45
PRKDC-206ENST00000536429 CD46P15529 392 aa12.21□□□□□ -0.45
PRKDC-206ENST00000536429 ALDH3A1P30838 453 aa12.21□□□□□ -0.45
PRKDC-206ENST00000536429 SSR4P51571 173 aa12.21□□□□□ -0.45
PRKDC-206ENST00000536429 KCNK10P57789 538 aa12.21□□□□□ -0.45
PRKDC-206ENST00000536429 ERVK-8P63133 956 aa12.21□□□□□ -0.45
PRKDC-206ENST00000536429 BTKQ06187 659 aa12.21□□□□□ -0.45
PRKDC-206ENST00000536429 ZNF267Q14586 743 aaPredicted RBP12.21□□□□□ -0.45
PRKDC-206ENST00000536429 MAPKAPK3Q16644 382 aa12.21□□□□□ -0.45
PRKDC-206ENST00000536429 KRT71Q3SY84 523 aa12.21□□□□□ -0.45
PRKDC-206ENST00000536429 CLEC6AQ6EIG7 209 aa12.21□□□□□ -0.45
PRKDC-206ENST00000536429 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.21□□□□□ -0.45
PRKDC-206ENST00000536429 FAM26EQ8N5C1 309 aa12.21□□□□□ -0.45
PRKDC-206ENST00000536429 TCP10LQ8TDR4 215 aa12.21□□□□□ -0.45
PRKDC-206ENST00000536429 RIT1Q92963 219 aa12.21□□□□□ -0.45
PRKDC-206ENST00000536429 FBXL20Q96IG2 436 aa12.21□□□□□ -0.45
PRKDC-206ENST00000536429 C5orf34Q96MH7 638 aa12.21□□□□□ -0.45
PRKDC-206ENST00000536429 RASL10BQ96S79 203 aa12.21□□□□□ -0.45
PRKDC-206ENST00000536429 EBPLQ9BY08 206 aa12.21□□□□□ -0.45
PRKDC-206ENST00000536429 TSPAN10Q9H1Z9 355 aaPredicted RBP12.21□□□□□ -0.45
PRKDC-206ENST00000536429 WDR41Q9HAD4 459 aa12.21□□□□□ -0.45
PRKDC-206ENST00000536429 HEY2Q9UBP5 337 aa12.21□□□□□ -0.45
PRKDC-206ENST00000536429 ERVK-19Q9WJR5 959 aa12.21□□□□□ -0.45
PRKDC-206ENST00000536429 PCDHGB6Q9Y5F9 930 aa12.21□□□□□ -0.45
PRKDC-206ENST00000536429 SPTAN1Q13813 2472 aaKnown RBP12.21□□□□□ -0.45
PRKDC-206ENST00000536429 ASPDHA6ND91 283 aa12.2□□□□□ -0.46
PRKDC-206ENST00000536429 TYROBPO43914 113 aa12.2□□□□□ -0.46
PRKDC-206ENST00000536429 PCDH7O60245 1069 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms